EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000004326 (Gene tree)
Gene ID: 106930277
Gene Symbol: trmu
Alias: -
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 5516 bases
Position: chrKQ552204.1:43908-49423
Accession: 106930277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003227	tRNA_Me_trans	PF03054.16	2.2e-134	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000011205	-	3702	XM_015007722	ENSPMEP00000003227	416 (aa)	XP_014863208	UPI00072E8662

Gene Model

Click here to download ENSPMEG00000004326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004326's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004326	trmu	99	70.843	ENSG00000100416	TRMU	96	76.101	Homo_sapiens
ENSPMEG00000004326	trmu	100	88.010	ENSAPOG00000014458	trmu	100	88.010	Acanthochromis_polyacanthus
ENSPMEG00000004326	trmu	98	72.660	ENSAMEG00000003319	TRMU	97	72.660	Ailuropoda_melanoleuca
ENSPMEG00000004326	trmu	100	86.538	ENSACIG00000002101	trmu	100	86.538	Amphilophus_citrinellus
ENSPMEG00000004326	trmu	100	88.729	ENSAOCG00000013155	trmu	100	88.729	Amphiprion_ocellaris
ENSPMEG00000004326	trmu	100	88.489	ENSAPEG00000013350	trmu	100	88.489	Amphiprion_percula
ENSPMEG00000004326	trmu	99	85.854	ENSATEG00000007814	trmu	99	85.854	Anabas_testudineus
ENSPMEG00000004326	trmu	91	74.211	ENSAPLG00000016380	TRMU	97	74.211	Anas_platyrhynchos
ENSPMEG00000004326	trmu	95	73.165	ENSACAG00000007720	TRMU	95	73.165	Anolis_carolinensis
ENSPMEG00000004326	trmu	99	71.046	ENSANAG00000038053	TRMU	97	71.046	Aotus_nancymaae
ENSPMEG00000004326	trmu	100	87.740	ENSACLG00000005395	trmu	100	87.740	Astatotilapia_calliptera
ENSPMEG00000004326	trmu	99	78.293	ENSAMXG00000005282	trmu	99	78.293	Astyanax_mexicanus
ENSPMEG00000004326	trmu	99	71.533	ENSBTAG00000005595	TRMU	99	71.533	Bos_taurus
ENSPMEG00000004326	trmu	91	40.617	WBGene00007114	mttu-1	98	40.617	Caenorhabditis_elegans
ENSPMEG00000004326	trmu	99	69.157	ENSCJAG00000000198	TRMU	99	69.157	Callithrix_jacchus
ENSPMEG00000004326	trmu	99	72.019	ENSCAFG00000000779	TRMU	98	71.463	Canis_familiaris
ENSPMEG00000004326	trmu	99	72.019	ENSCAFG00020009184	TRMU	98	71.463	Canis_lupus_dingo
ENSPMEG00000004326	trmu	100	70.743	ENSCHIG00000017074	TRMU	100	70.743	Capra_hircus
ENSPMEG00000004326	trmu	96	72.932	ENSTSYG00000003853	TRMU	95	72.932	Carlito_syrichta
ENSPMEG00000004326	trmu	96	67.064	ENSCAPG00000013034	TRMU	98	67.064	Cavia_aperea
ENSPMEG00000004326	trmu	99	70.843	ENSCPOG00000020780	TRMU	99	70.843	Cavia_porcellus
ENSPMEG00000004326	trmu	99	69.639	ENSCCAG00000021641	TRMU	99	69.639	Cebus_capucinus
ENSPMEG00000004326	trmu	96	72.180	ENSCATG00000032800	TRMU	95	72.180	Cercocebus_atys
ENSPMEG00000004326	trmu	99	70.218	ENSCLAG00000017269	TRMU	98	70.218	Chinchilla_lanigera
ENSPMEG00000004326	trmu	99	70.602	ENSCSAG00000005279	TRMU	99	70.602	Chlorocebus_sabaeus
ENSPMEG00000004326	trmu	92	72.396	ENSCPBG00000011621	TRMU	96	72.396	Chrysemys_picta_bellii
ENSPMEG00000004326	trmu	94	47.208	ENSCING00000019371	-	96	47.208	Ciona_intestinalis
ENSPMEG00000004326	trmu	96	71.429	ENSCANG00000041645	TRMU	95	71.429	Colobus_angolensis_palliatus
ENSPMEG00000004326	trmu	99	70.560	ENSCGRG00001001739	Trmu	98	70.560	Cricetulus_griseus_chok1gshd
ENSPMEG00000004326	trmu	99	65.450	ENSCGRG00000002781	Trmu	98	65.450	Cricetulus_griseus_crigri
ENSPMEG00000004326	trmu	99	79.518	ENSCSEG00000012382	trmu	99	79.518	Cynoglossus_semilaevis
ENSPMEG00000004326	trmu	100	91.587	ENSCVAG00000001366	trmu	100	91.587	Cyprinodon_variegatus
ENSPMEG00000004326	trmu	100	74.519	ENSDARG00000043734	trmu	100	74.519	Danio_rerio
ENSPMEG00000004326	trmu	62	59.073	ENSDNOG00000047245	-	95	57.721	Dasypus_novemcinctus
ENSPMEG00000004326	trmu	96	72.431	ENSDORG00000007455	Trmu	97	72.431	Dipodomys_ordii
ENSPMEG00000004326	trmu	93	43.264	FBgn0040337	CG3021	95	43.264	Drosophila_melanogaster
ENSPMEG00000004326	trmu	94	56.997	ENSEBUG00000007454	trmu	100	55.331	Eptatretus_burgeri
ENSPMEG00000004326	trmu	96	73.183	ENSEASG00005021725	TRMU	99	71.463	Equus_asinus_asinus
ENSPMEG00000004326	trmu	96	73.183	ENSECAG00000000467	TRMU	99	71.463	Equus_caballus
ENSPMEG00000004326	trmu	71	53.691	ENSEEUG00000000074	-	71	53.691	Erinaceus_europaeus
ENSPMEG00000004326	trmu	100	80.096	ENSELUG00000009464	trmu	99	82.065	Esox_lucius
ENSPMEG00000004326	trmu	96	73.183	ENSFCAG00000006533	TRMU	99	71.325	Felis_catus
ENSPMEG00000004326	trmu	92	71.939	ENSFALG00000010035	TRMU	99	71.939	Ficedula_albicollis
ENSPMEG00000004326	trmu	93	69.509	ENSFDAG00000017472	TRMU	98	69.509	Fukomys_damarensis
ENSPMEG00000004326	trmu	100	90.865	ENSFHEG00000003162	trmu	100	90.865	Fundulus_heteroclitus
ENSPMEG00000004326	trmu	97	71.499	ENSGMOG00000001323	trmu	100	71.499	Gadus_morhua
ENSPMEG00000004326	trmu	98	72.771	ENSGALG00000031922	TRMU	98	72.771	Gallus_gallus
ENSPMEG00000004326	trmu	98	95.844	ENSGAFG00000013331	trmu	98	95.844	Gambusia_affinis
ENSPMEG00000004326	trmu	100	82.742	ENSGACG00000019024	trmu	100	82.742	Gasterosteus_aculeatus
ENSPMEG00000004326	trmu	99	70.843	ENSGGOG00000000203	TRMU	99	70.843	Gorilla_gorilla
ENSPMEG00000004326	trmu	100	87.260	ENSHBUG00000023421	trmu	100	87.260	Haplochromis_burtoni
ENSPMEG00000004326	trmu	99	69.231	ENSHGLG00000009278	TRMU	99	69.231	Heterocephalus_glaber_female
ENSPMEG00000004326	trmu	99	69.231	ENSHGLG00100018863	TRMU	99	69.231	Heterocephalus_glaber_male
ENSPMEG00000004326	trmu	99	85.060	ENSHCOG00000013459	trmu	99	85.060	Hippocampus_comes
ENSPMEG00000004326	trmu	96	80.451	ENSIPUG00000009785	trmu	98	80.451	Ictalurus_punctatus
ENSPMEG00000004326	trmu	99	70.843	ENSSTOG00000010993	TRMU	99	70.843	Ictidomys_tridecemlineatus
ENSPMEG00000004326	trmu	97	70.720	ENSJJAG00000000667	Trmu	97	70.720	Jaculus_jaculus
ENSPMEG00000004326	trmu	100	85.096	ENSKMAG00000008516	trmu	100	85.096	Kryptolebias_marmoratus
ENSPMEG00000004326	trmu	100	83.894	ENSLBEG00000018831	trmu	100	83.894	Labrus_bergylta
ENSPMEG00000004326	trmu	98	73.430	ENSLACG00000013713	TRMU	99	73.430	Latimeria_chalumnae
ENSPMEG00000004326	trmu	99	78.365	ENSLOCG00000016066	trmu	99	78.365	Lepisosteus_oculatus
ENSPMEG00000004326	trmu	99	61.962	ENSLAFG00000005129	TRMU	99	61.962	Loxodonta_africana
ENSPMEG00000004326	trmu	99	70.843	ENSMFAG00000039767	TRMU	99	70.843	Macaca_fascicularis
ENSPMEG00000004326	trmu	99	70.843	ENSMMUG00000000807	TRMU	99	70.843	Macaca_mulatta
ENSPMEG00000004326	trmu	99	70.843	ENSMNEG00000028164	TRMU	99	70.843	Macaca_nemestrina
ENSPMEG00000004326	trmu	96	72.180	ENSMLEG00000033884	TRMU	95	72.180	Mandrillus_leucophaeus
ENSPMEG00000004326	trmu	100	83.654	ENSMAMG00000004717	trmu	100	83.654	Mastacembelus_armatus
ENSPMEG00000004326	trmu	100	87.740	ENSMZEG00005015797	trmu	100	87.740	Maylandia_zebra
ENSPMEG00000004326	trmu	79	71.302	ENSMGAG00000007550	TRMU	99	71.302	Meleagris_gallopavo
ENSPMEG00000004326	trmu	99	70.316	ENSMAUG00000022282	Trmu	99	70.316	Mesocricetus_auratus
ENSPMEG00000004326	trmu	96	72.180	ENSMICG00000029046	TRMU	97	72.180	Microcebus_murinus
ENSPMEG00000004326	trmu	96	71.178	ENSMOCG00000014641	Trmu	96	71.178	Microtus_ochrogaster
ENSPMEG00000004326	trmu	100	83.173	ENSMMOG00000007229	trmu	100	83.173	Mola_mola
ENSPMEG00000004326	trmu	95	69.347	ENSMODG00000007433	TRMU	93	69.347	Monodelphis_domestica
ENSPMEG00000004326	trmu	100	83.654	ENSMALG00000007721	trmu	100	83.654	Monopterus_albus
ENSPMEG00000004326	trmu	100	69.065	MGP_CAROLIEiJ_G0020134	Trmu	100	69.065	Mus_caroli
ENSPMEG00000004326	trmu	100	69.305	ENSMUSG00000022386	Trmu	100	69.305	Mus_musculus
ENSPMEG00000004326	trmu	100	69.065	MGP_PahariEiJ_G0020139	Trmu	100	69.065	Mus_pahari
ENSPMEG00000004326	trmu	100	69.305	MGP_SPRETEiJ_G0021031	Trmu	100	69.305	Mus_spretus
ENSPMEG00000004326	trmu	99	71.084	ENSMPUG00000002523	TRMU	99	71.084	Mustela_putorius_furo
ENSPMEG00000004326	trmu	99	70.773	ENSNGAG00000005132	Trmu	99	70.773	Nannospalax_galili
ENSPMEG00000004326	trmu	100	87.740	ENSNBRG00000022690	trmu	99	89.500	Neolamprologus_brichardi
ENSPMEG00000004326	trmu	99	70.602	ENSNLEG00000015773	TRMU	99	70.602	Nomascus_leucogenys
ENSPMEG00000004326	trmu	79	60.245	ENSMEUG00000000216	TRMU	99	60.245	Notamacropus_eugenii
ENSPMEG00000004326	trmu	99	70.574	ENSODEG00000014745	TRMU	100	70.574	Octodon_degus
ENSPMEG00000004326	trmu	100	87.500	ENSONIG00000009821	trmu	100	87.500	Oreochromis_niloticus
ENSPMEG00000004326	trmu	92	68.750	ENSOANG00000001891	TRMU	97	68.750	Ornithorhynchus_anatinus
ENSPMEG00000004326	trmu	92	71.615	ENSOCUG00000003664	TRMU	96	70.398	Oryctolagus_cuniculus
ENSPMEG00000004326	trmu	99	82.683	ENSORLG00000019015	trmu	99	82.683	Oryzias_latipes
ENSPMEG00000004326	trmu	99	83.171	ENSORLG00020006830	trmu	99	83.171	Oryzias_latipes_hni
ENSPMEG00000004326	trmu	99	83.171	ENSORLG00015003907	trmu	99	83.171	Oryzias_latipes_hsok
ENSPMEG00000004326	trmu	60	82.661	ENSOMEG00000015541	trmu	90	82.661	Oryzias_melastigma
ENSPMEG00000004326	trmu	99	70.024	ENSOGAG00000008096	TRMU	100	70.024	Otolemur_garnettii
ENSPMEG00000004326	trmu	91	69.211	ENSOARG00000019475	TRMU	93	69.211	Ovis_aries
ENSPMEG00000004326	trmu	99	70.843	ENSPPAG00000033944	TRMU	99	70.843	Pan_paniscus
ENSPMEG00000004326	trmu	96	73.183	ENSPPRG00000004197	TRMU	98	71.498	Panthera_pardus
ENSPMEG00000004326	trmu	67	72.924	ENSPTIG00000014122	TRMU	97	75.000	Panthera_tigris_altaica
ENSPMEG00000004326	trmu	99	70.843	ENSPTRG00000014510	TRMU	99	70.843	Pan_troglodytes
ENSPMEG00000004326	trmu	95	72.405	ENSPANG00000023074	TRMU	97	69.315	Papio_anubis
ENSPMEG00000004326	trmu	99	76.942	ENSPKIG00000002849	trmu	99	76.942	Paramormyrops_kingsleyae
ENSPMEG00000004326	trmu	88	73.901	ENSPSIG00000013020	TRMU	95	73.901	Pelodiscus_sinensis
ENSPMEG00000004326	trmu	100	82.692	ENSPMGG00000004083	trmu	100	82.692	Periophthalmus_magnuspinnatus
ENSPMEG00000004326	trmu	99	69.830	ENSPEMG00000014007	Trmu	99	69.830	Peromyscus_maniculatus_bairdii
ENSPMEG00000004326	trmu	96	67.000	ENSPCIG00000009923	TRMU	95	66.832	Phascolarctos_cinereus
ENSPMEG00000004326	trmu	97	95.802	ENSPFOG00000008197	trmu	91	95.802	Poecilia_formosa
ENSPMEG00000004326	trmu	99	99.518	ENSPLAG00000008414	trmu	99	99.518	Poecilia_latipinna
ENSPMEG00000004326	trmu	99	98.313	ENSPREG00000007980	trmu	99	98.313	Poecilia_reticulata
ENSPMEG00000004326	trmu	99	71.325	ENSPPYG00000011949	TRMU	99	71.325	Pongo_abelii
ENSPMEG00000004326	trmu	93	63.566	ENSPCAG00000013462	TRMU	99	63.566	Procavia_capensis
ENSPMEG00000004326	trmu	99	70.073	ENSPCOG00000016539	TRMU	99	70.073	Propithecus_coquereli
ENSPMEG00000004326	trmu	96	66.667	ENSPVAG00000013202	TRMU	99	65.144	Pteropus_vampyrus
ENSPMEG00000004326	trmu	100	87.260	ENSPNYG00000005629	trmu	100	87.260	Pundamilia_nyererei
ENSPMEG00000004326	trmu	98	79.462	ENSPNAG00000006339	trmu	96	79.462	Pygocentrus_nattereri
ENSPMEG00000004326	trmu	100	69.544	ENSRNOG00000016465	Trmu	100	69.544	Rattus_norvegicus
ENSPMEG00000004326	trmu	99	69.639	ENSRBIG00000038973	TRMU	99	69.639	Rhinopithecus_bieti
ENSPMEG00000004326	trmu	99	69.880	ENSRROG00000004267	TRMU	99	69.880	Rhinopithecus_roxellana
ENSPMEG00000004326	trmu	92	33.663	YDL033C	SLM3	92	33.663	Saccharomyces_cerevisiae
ENSPMEG00000004326	trmu	99	70.361	ENSSBOG00000030184	TRMU	99	70.361	Saimiri_boliviensis_boliviensis
ENSPMEG00000004326	trmu	91	75.000	ENSSFOG00015020664	trmu	99	75.000	Scleropages_formosus
ENSPMEG00000004326	trmu	100	84.375	ENSSMAG00000019450	trmu	100	84.375	Scophthalmus_maximus
ENSPMEG00000004326	trmu	100	86.779	ENSSDUG00000011913	trmu	100	86.779	Seriola_dumerili
ENSPMEG00000004326	trmu	100	86.538	ENSSLDG00000011684	trmu	100	86.538	Seriola_lalandi_dorsalis
ENSPMEG00000004326	trmu	95	62.025	ENSSPUG00000017123	TRMU	93	62.025	Sphenodon_punctatus
ENSPMEG00000004326	trmu	100	84.856	ENSSPAG00000021875	trmu	100	84.856	Stegastes_partitus
ENSPMEG00000004326	trmu	97	71.464	ENSSSCG00000000007	TRMU	99	69.690	Sus_scrofa
ENSPMEG00000004326	trmu	89	75.335	ENSTGUG00000003663	-	100	75.335	Taeniopygia_guttata
ENSPMEG00000004326	trmu	99	83.535	ENSTRUG00000001231	trmu	100	83.535	Takifugu_rubripes
ENSPMEG00000004326	trmu	99	83.614	ENSTNIG00000010484	trmu	98	83.614	Tetraodon_nigroviridis
ENSPMEG00000004326	trmu	75	56.303	ENSTBEG00000011276	-	80	56.303	Tupaia_belangeri
ENSPMEG00000004326	trmu	96	73.183	ENSTTRG00000004160	TRMU	95	73.183	Tursiops_truncatus
ENSPMEG00000004326	trmu	70	74.914	ENSUAMG00000024825	TRMU	97	74.914	Ursus_americanus
ENSPMEG00000004326	trmu	95	61.266	ENSUMAG00000019079	TRMU	97	74.708	Ursus_maritimus
ENSPMEG00000004326	trmu	53	63.014	ENSVPAG00000000685	-	100	63.014	Vicugna_pacos
ENSPMEG00000004326	trmu	100	70.433	ENSVVUG00000024963	TRMU	98	70.433	Vulpes_vulpes
ENSPMEG00000004326	trmu	99	72.947	ENSXETG00000023304	trmu	97	72.947	Xenopus_tropicalis
ENSPMEG00000004326	trmu	99	94.019	ENSXCOG00000015105	trmu	99	94.019	Xiphophorus_couchianus
ENSPMEG00000004326	trmu	99	96.386	ENSXMAG00000006697	trmu	99	96.386	Xiphophorus_maculatus