EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000004577 (Gene tree)
Gene ID: 106927617
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 11496 bases
Position: chrKQ551945.1:109921-121416
Accession: 106927617
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000023156	AARP2CN	PF08142.12	2.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000010895	-	3627	XM_015003301	ENSPMEP00000023156	839 (aa)	XP_014858787	UPI00072E81F8

Gene Model

Click here to download ENSPMEG00000004577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004577	tsr1	99	54.611	ENSG00000167721	TSR1	99	54.012	Homo_sapiens
ENSPMEG00000004577	tsr1	99	85.203	ENSAPOG00000020891	tsr1	100	84.606	Acanthochromis_polyacanthus
ENSPMEG00000004577	tsr1	99	54.426	ENSAMEG00000007599	TSR1	99	52.899	Ailuropoda_melanoleuca
ENSPMEG00000004577	tsr1	99	81.340	ENSACIG00000007090	tsr1	100	80.861	Amphilophus_citrinellus
ENSPMEG00000004577	tsr1	99	84.330	ENSAOCG00000023284	tsr1	100	84.211	Amphiprion_ocellaris
ENSPMEG00000004577	tsr1	93	83.697	ENSAPEG00000008452	tsr1	100	83.697	Amphiprion_percula
ENSPMEG00000004577	tsr1	99	83.353	ENSATEG00000021961	tsr1	100	83.115	Anabas_testudineus
ENSPMEG00000004577	tsr1	90	56.954	ENSAPLG00000013422	TSR1	98	57.616	Anas_platyrhynchos
ENSPMEG00000004577	tsr1	71	50.579	ENSACAG00000000859	TSR1	92	49.010	Anolis_carolinensis
ENSPMEG00000004577	tsr1	99	54.928	ENSANAG00000031071	TSR1	99	54.132	Aotus_nancymaae
ENSPMEG00000004577	tsr1	100	84.744	ENSACLG00000007595	tsr1	100	83.075	Astatotilapia_calliptera
ENSPMEG00000004577	tsr1	50	72.792	ENSAMXG00000008470	tsr1	89	72.792	Astyanax_mexicanus
ENSPMEG00000004577	tsr1	98	55.928	ENSBTAG00000004225	TSR1	99	55.024	Bos_taurus
ENSPMEG00000004577	tsr1	96	40.926	WBGene00006497	tag-151	97	39.952	Caenorhabditis_elegans
ENSPMEG00000004577	tsr1	99	54.087	ENSCJAG00000012456	TSR1	99	53.293	Callithrix_jacchus
ENSPMEG00000004577	tsr1	89	52.450	ENSCAFG00000019273	-	100	55.043	Canis_familiaris
ENSPMEG00000004577	tsr1	99	54.502	ENSCAFG00000002106	-	99	53.737	Canis_familiaris
ENSPMEG00000004577	tsr1	99	54.502	ENSCAFG00020009728	TSR1	99	53.737	Canis_lupus_dingo
ENSPMEG00000004577	tsr1	99	56.182	ENSCHIG00000023935	TSR1	99	55.304	Capra_hircus
ENSPMEG00000004577	tsr1	99	55.288	ENSTSYG00000005468	TSR1	99	54.850	Carlito_syrichta
ENSPMEG00000004577	tsr1	92	54.522	ENSCPOG00000014833	TSR1	99	54.510	Cavia_porcellus
ENSPMEG00000004577	tsr1	92	54.134	ENSCCAG00000028962	TSR1	98	53.282	Cebus_capucinus
ENSPMEG00000004577	tsr1	99	54.491	ENSCATG00000044262	TSR1	99	53.708	Cercocebus_atys
ENSPMEG00000004577	tsr1	99	55.048	ENSCLAG00000005567	TSR1	99	54.796	Chinchilla_lanigera
ENSPMEG00000004577	tsr1	99	54.611	ENSCSAG00000013788	TSR1	99	53.828	Chlorocebus_sabaeus
ENSPMEG00000004577	tsr1	98	54.655	ENSCPBG00000020363	TSR1	98	53.673	Chrysemys_picta_bellii
ENSPMEG00000004577	tsr1	96	45.345	ENSCING00000020658	-	99	45.067	Ciona_intestinalis
ENSPMEG00000004577	tsr1	95	45.577	ENSCSAVG00000001875	-	100	44.815	Ciona_savignyi
ENSPMEG00000004577	tsr1	97	49.274	ENSCANG00000033056	TSR1	98	50.726	Colobus_angolensis_palliatus
ENSPMEG00000004577	tsr1	99	53.541	ENSCGRG00001023942	Tsr1	99	53.349	Cricetulus_griseus_chok1gshd
ENSPMEG00000004577	tsr1	99	50.542	ENSCGRG00000013015	Tsr1	99	49.580	Cricetulus_griseus_crigri
ENSPMEG00000004577	tsr1	99	77.392	ENSCSEG00000013009	tsr1	100	77.392	Cynoglossus_semilaevis
ENSPMEG00000004577	tsr1	99	88.278	ENSCVAG00000000506	tsr1	100	87.919	Cyprinodon_variegatus
ENSPMEG00000004577	tsr1	99	73.753	ENSDARG00000007744	tsr1	99	74.584	Danio_rerio
ENSPMEG00000004577	tsr1	99	55.889	ENSDNOG00000004715	TSR1	99	56.821	Dasypus_novemcinctus
ENSPMEG00000004577	tsr1	99	54.142	ENSDORG00000016371	-	99	53.349	Dipodomys_ordii
ENSPMEG00000004577	tsr1	95	48.383	ENSDORG00000023234	-	99	48.010	Dipodomys_ordii
ENSPMEG00000004577	tsr1	96	45.074	FBgn0037073	Tsr1	96	44.704	Drosophila_melanogaster
ENSPMEG00000004577	tsr1	86	67.869	ENSETEG00000017534	TSR1	88	67.213	Echinops_telfairi
ENSPMEG00000004577	tsr1	94	51.629	ENSEBUG00000013731	TSR1	97	50.310	Eptatretus_burgeri
ENSPMEG00000004577	tsr1	99	55.822	ENSEASG00005009302	TSR1	97	54.808	Equus_asinus_asinus
ENSPMEG00000004577	tsr1	99	55.769	ENSECAG00000009114	TSR1	99	54.753	Equus_caballus
ENSPMEG00000004577	tsr1	100	74.733	ENSELUG00000020984	tsr1	96	74.232	Esox_lucius
ENSPMEG00000004577	tsr1	99	54.874	ENSFCAG00000006313	TSR1	99	54.197	Felis_catus
ENSPMEG00000004577	tsr1	100	57.801	ENSFALG00000006532	TSR1	100	56.856	Ficedula_albicollis
ENSPMEG00000004577	tsr1	99	54.874	ENSFDAG00000006038	TSR1	99	54.152	Fukomys_damarensis
ENSPMEG00000004577	tsr1	100	89.180	ENSFHEG00000003626	tsr1	100	88.466	Fundulus_heteroclitus
ENSPMEG00000004577	tsr1	99	70.952	ENSGMOG00000010336	tsr1	100	72.143	Gadus_morhua
ENSPMEG00000004577	tsr1	100	96.782	ENSGAFG00000012993	tsr1	100	96.782	Gambusia_affinis
ENSPMEG00000004577	tsr1	99	80.166	ENSGACG00000010843	tsr1	100	79.810	Gasterosteus_aculeatus
ENSPMEG00000004577	tsr1	98	55.193	ENSGAGG00000025619	-	99	54.436	Gopherus_agassizii
ENSPMEG00000004577	tsr1	99	54.731	ENSGGOG00000001704	TSR1	99	54.132	Gorilla_gorilla
ENSPMEG00000004577	tsr1	100	84.863	ENSHBUG00000017904	tsr1	100	83.552	Haplochromis_burtoni
ENSPMEG00000004577	tsr1	96	48.571	ENSHGLG00000015688	-	98	47.772	Heterocephalus_glaber_female
ENSPMEG00000004577	tsr1	99	55.329	ENSHGLG00000012806	-	99	54.491	Heterocephalus_glaber_female
ENSPMEG00000004577	tsr1	99	55.329	ENSHGLG00100015392	TSR1	99	54.491	Heterocephalus_glaber_male
ENSPMEG00000004577	tsr1	99	77.512	ENSHCOG00000001432	tsr1	100	77.153	Hippocampus_comes
ENSPMEG00000004577	tsr1	99	73.246	ENSIPUG00000004618	tsr1	100	73.246	Ictalurus_punctatus
ENSPMEG00000004577	tsr1	99	55.409	ENSSTOG00000011819	TSR1	99	55.168	Ictidomys_tridecemlineatus
ENSPMEG00000004577	tsr1	91	53.437	ENSJJAG00000019505	Tsr1	96	51.823	Jaculus_jaculus
ENSPMEG00000004577	tsr1	100	83.194	ENSKMAG00000005763	tsr1	100	83.075	Kryptolebias_marmoratus
ENSPMEG00000004577	tsr1	100	82.718	ENSLBEG00000021823	tsr1	100	82.956	Labrus_bergylta
ENSPMEG00000004577	tsr1	99	57.227	ENSLACG00000002197	TSR1	100	56.140	Latimeria_chalumnae
ENSPMEG00000004577	tsr1	90	75.000	ENSLOCG00000006491	TSR1	99	75.000	Lepisosteus_oculatus
ENSPMEG00000004577	tsr1	99	54.731	ENSMFAG00000021330	TSR1	99	53.947	Macaca_fascicularis
ENSPMEG00000004577	tsr1	99	54.611	ENSMMUG00000017519	TSR1	99	53.828	Macaca_mulatta
ENSPMEG00000004577	tsr1	99	54.731	ENSMNEG00000031382	TSR1	99	53.947	Macaca_nemestrina
ENSPMEG00000004577	tsr1	99	54.491	ENSMLEG00000036733	TSR1	99	53.708	Mandrillus_leucophaeus
ENSPMEG00000004577	tsr1	100	82.604	ENSMAMG00000017918	tsr1	100	82.464	Mastacembelus_armatus
ENSPMEG00000004577	tsr1	99	83.871	ENSMZEG00005007477	tsr1	100	83.274	Maylandia_zebra
ENSPMEG00000004577	tsr1	99	57.314	ENSMGAG00000005576	TSR1	99	56.699	Meleagris_gallopavo
ENSPMEG00000004577	tsr1	99	55.716	ENSMICG00000012943	TSR1	99	54.753	Microcebus_murinus
ENSPMEG00000004577	tsr1	99	54.742	ENSMOCG00000022764	Tsr1	99	52.990	Microtus_ochrogaster
ENSPMEG00000004577	tsr1	99	82.536	ENSMMOG00000014280	tsr1	100	81.938	Mola_mola
ENSPMEG00000004577	tsr1	97	56.295	ENSMODG00000010658	TSR1	99	55.850	Monodelphis_domestica
ENSPMEG00000004577	tsr1	99	83.612	ENSMALG00000011681	tsr1	100	83.254	Monopterus_albus
ENSPMEG00000004577	tsr1	99	54.142	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.054	Mus_caroli
ENSPMEG00000004577	tsr1	99	54.742	ENSMUSG00000038335	Tsr1	99	53.653	Mus_musculus
ENSPMEG00000004577	tsr1	99	55.102	MGP_PahariEiJ_G0017864	Tsr1	99	54.012	Mus_pahari
ENSPMEG00000004577	tsr1	99	54.862	MGP_SPRETEiJ_G0017570	Tsr1	99	53.772	Mus_spretus
ENSPMEG00000004577	tsr1	81	57.226	ENSMPUG00000013000	TSR1	100	55.994	Mustela_putorius_furo
ENSPMEG00000004577	tsr1	99	55.889	ENSMLUG00000003505	TSR1	99	54.567	Myotis_lucifugus
ENSPMEG00000004577	tsr1	100	84.982	ENSNBRG00000020728	tsr1	100	83.433	Neolamprologus_brichardi
ENSPMEG00000004577	tsr1	99	51.140	ENSNLEG00000017184	TSR1	97	65.043	Nomascus_leucogenys
ENSPMEG00000004577	tsr1	99	83.333	ENSONIG00000013131	tsr1	100	82.270	Oreochromis_niloticus
ENSPMEG00000004577	tsr1	99	55.529	ENSOCUG00000014256	TSR1	99	54.928	Oryctolagus_cuniculus
ENSPMEG00000004577	tsr1	100	82.360	ENSORLG00000004926	tsr1	100	82.002	Oryzias_latipes
ENSPMEG00000004577	tsr1	100	82.718	ENSORLG00020008792	tsr1	100	82.002	Oryzias_latipes_hni
ENSPMEG00000004577	tsr1	100	82.837	ENSORLG00015013838	tsr1	100	82.479	Oryzias_latipes_hsok
ENSPMEG00000004577	tsr1	100	83.194	ENSOMEG00000004830	tsr1	100	82.598	Oryzias_melastigma
ENSPMEG00000004577	tsr1	99	53.929	ENSOGAG00000004492	TSR1	99	53.737	Otolemur_garnettii
ENSPMEG00000004577	tsr1	99	56.303	ENSOARG00000015437	TSR1	97	55.317	Ovis_aries
ENSPMEG00000004577	tsr1	99	54.611	ENSPPAG00000036355	TSR1	99	54.012	Pan_paniscus
ENSPMEG00000004577	tsr1	99	54.633	ENSPPRG00000015519	-	99	53.957	Panthera_pardus
ENSPMEG00000004577	tsr1	99	54.633	ENSPTIG00000010608	TSR1	99	53.957	Panthera_tigris_altaica
ENSPMEG00000004577	tsr1	99	54.611	ENSPTRG00000008547	TSR1	99	54.012	Pan_troglodytes
ENSPMEG00000004577	tsr1	99	51.918	ENSPANG00000024463	TSR1	99	51.856	Papio_anubis
ENSPMEG00000004577	tsr1	99	70.560	ENSPKIG00000013972	tsr1	100	70.918	Paramormyrops_kingsleyae
ENSPMEG00000004577	tsr1	87	55.450	ENSPSIG00000018258	TSR1	99	54.434	Pelodiscus_sinensis
ENSPMEG00000004577	tsr1	99	78.683	ENSPMGG00000011577	tsr1	99	77.458	Periophthalmus_magnuspinnatus
ENSPMEG00000004577	tsr1	99	53.717	ENSPEMG00000018033	Tsr1	99	52.575	Peromyscus_maniculatus_bairdii
ENSPMEG00000004577	tsr1	98	55.767	ENSPCIG00000009357	TSR1	97	55.806	Phascolarctos_cinereus
ENSPMEG00000004577	tsr1	99	97.967	ENSPFOG00000004483	TSR1	100	97.967	Poecilia_formosa
ENSPMEG00000004577	tsr1	100	98.927	ENSPLAG00000022320	tsr1	100	98.927	Poecilia_latipinna
ENSPMEG00000004577	tsr1	97	97.800	ENSPREG00000010354	tsr1	99	97.408	Poecilia_reticulata
ENSPMEG00000004577	tsr1	99	50.298	ENSPPYG00000007792	TSR1	99	49.643	Pongo_abelii
ENSPMEG00000004577	tsr1	51	60.465	ENSPCAG00000012973	-	70	66.667	Procavia_capensis
ENSPMEG00000004577	tsr1	99	55.181	ENSPCOG00000017928	TSR1	99	54.819	Propithecus_coquereli
ENSPMEG00000004577	tsr1	99	55.409	ENSPVAG00000002162	TSR1	99	55.210	Pteropus_vampyrus
ENSPMEG00000004577	tsr1	100	84.982	ENSPNYG00000016163	tsr1	100	83.313	Pundamilia_nyererei
ENSPMEG00000004577	tsr1	99	73.690	ENSPNAG00000008659	tsr1	99	73.722	Pygocentrus_nattereri
ENSPMEG00000004577	tsr1	99	53.606	ENSRNOG00000002980	Tsr1	99	53.516	Rattus_norvegicus
ENSPMEG00000004577	tsr1	99	54.611	ENSRBIG00000040016	TSR1	99	54.048	Rhinopithecus_bieti
ENSPMEG00000004577	tsr1	99	54.491	ENSRROG00000030361	TSR1	99	53.929	Rhinopithecus_roxellana
ENSPMEG00000004577	tsr1	95	30.012	YDL060W	-	98	30.024	Saccharomyces_cerevisiae
ENSPMEG00000004577	tsr1	99	54.611	ENSSBOG00000020785	TSR1	99	53.772	Saimiri_boliviensis_boliviensis
ENSPMEG00000004577	tsr1	98	55.781	ENSSHAG00000011394	TSR1	99	55.648	Sarcophilus_harrisii
ENSPMEG00000004577	tsr1	99	72.249	ENSSFOG00015005455	tsr1	100	72.010	Scleropages_formosus
ENSPMEG00000004577	tsr1	99	81.818	ENSSMAG00000009504	tsr1	100	81.579	Scophthalmus_maximus
ENSPMEG00000004577	tsr1	100	83.948	ENSSDUG00000012074	tsr1	100	83.591	Seriola_dumerili
ENSPMEG00000004577	tsr1	100	84.167	ENSSLDG00000002031	tsr1	100	84.643	Seriola_lalandi_dorsalis
ENSPMEG00000004577	tsr1	92	56.800	ENSSARG00000000759	TSR1	93	56.800	Sorex_araneus
ENSPMEG00000004577	tsr1	99	56.595	ENSSPUG00000007042	TSR1	99	56.100	Sphenodon_punctatus
ENSPMEG00000004577	tsr1	99	84.845	ENSSPAG00000021951	tsr1	100	85.084	Stegastes_partitus
ENSPMEG00000004577	tsr1	99	55.889	ENSSSCG00000038534	TSR1	99	55.048	Sus_scrofa
ENSPMEG00000004577	tsr1	90	59.974	ENSTGUG00000005883	TSR1	100	58.917	Taeniopygia_guttata
ENSPMEG00000004577	tsr1	99	80.622	ENSTRUG00000004665	tsr1	100	80.263	Takifugu_rubripes
ENSPMEG00000004577	tsr1	99	81.544	ENSTNIG00000016196	tsr1	100	81.032	Tetraodon_nigroviridis
ENSPMEG00000004577	tsr1	66	70.000	ENSTBEG00000015275	-	66	70.000	Tupaia_belangeri
ENSPMEG00000004577	tsr1	99	56.475	ENSTTRG00000001177	TSR1	99	55.263	Tursiops_truncatus
ENSPMEG00000004577	tsr1	99	54.796	ENSUAMG00000025160	TSR1	99	53.618	Ursus_americanus
ENSPMEG00000004577	tsr1	95	54.084	ENSUMAG00000009294	TSR1	98	53.317	Ursus_maritimus
ENSPMEG00000004577	tsr1	99	54.502	ENSVVUG00000021767	TSR1	99	53.737	Vulpes_vulpes
ENSPMEG00000004577	tsr1	99	52.893	ENSXETG00000023797	tsr1	100	52.179	Xenopus_tropicalis
ENSPMEG00000004577	tsr1	99	93.421	ENSXCOG00000009635	tsr1	100	91.885	Xiphophorus_couchianus
ENSPMEG00000004577	tsr1	100	95.833	ENSXMAG00000001397	tsr1	97	95.833	Xiphophorus_maculatus