EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000004628 (Gene tree)
Gene ID: 106930989
Gene Symbol: polr1d
Alias: -
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 9682 bases
Position: chrKQ552296.1:114241-123922
Accession: 106930989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003477	RNA_pol_L_2	PF13656.6	6.8e-30	1	1
ENSPMEP00000003477	RNA_pol_L	PF01193.24	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000010786	-	3684	XM_015008887	ENSPMEP00000003477	114 (aa)	XP_014864373	UPI0004444C95

Gene Model

Click here to download ENSPMEG00000004628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000004628	polr1d	94	33.645	ENSPMEG00000020585	polr2j	89	33.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004628	polr1d	92	72.381	ENSG00000186184	POLR1D	91	72.381	Homo_sapiens
ENSPMEG00000004628	polr1d	90	84.466	ENSAPOG00000021882	polr1d	97	84.466	Acanthochromis_polyacanthus
ENSPMEG00000004628	polr1d	92	73.333	ENSAMEG00000019095	POLR1D	84	73.333	Ailuropoda_melanoleuca
ENSPMEG00000004628	polr1d	100	84.348	ENSACIG00000013328	polr1d	100	84.348	Amphilophus_citrinellus
ENSPMEG00000004628	polr1d	100	84.211	ENSAOCG00000018500	polr1d	100	84.211	Amphiprion_ocellaris
ENSPMEG00000004628	polr1d	100	85.088	ENSAPEG00000009489	polr1d	100	85.088	Amphiprion_percula
ENSPMEG00000004628	polr1d	100	87.719	ENSATEG00000019322	polr1d	100	87.719	Anabas_testudineus
ENSPMEG00000004628	polr1d	97	66.667	ENSACAG00000015753	POLR1D	96	66.667	Anolis_carolinensis
ENSPMEG00000004628	polr1d	92	72.381	ENSANAG00000024486	POLR1D	79	72.381	Aotus_nancymaae
ENSPMEG00000004628	polr1d	100	89.474	ENSACLG00000023805	polr1d	100	89.474	Astatotilapia_calliptera
ENSPMEG00000004628	polr1d	99	76.106	ENSAMXG00000036118	polr1d	98	76.106	Astyanax_mexicanus
ENSPMEG00000004628	polr1d	92	73.333	ENSBTAG00000033252	-	79	73.333	Bos_taurus
ENSPMEG00000004628	polr1d	92	73.333	ENSBTAG00000008642	POLR1D	79	73.333	Bos_taurus
ENSPMEG00000004628	polr1d	70	38.750	WBGene00010230	rpac-19	56	38.750	Caenorhabditis_elegans
ENSPMEG00000004628	polr1d	92	73.333	ENSCJAG00000044669	POLR1D	79	73.333	Callithrix_jacchus
ENSPMEG00000004628	polr1d	92	73.333	ENSCAFG00000006755	POLR1D	79	73.333	Canis_familiaris
ENSPMEG00000004628	polr1d	92	72.381	ENSCHIG00000021910	POLR1D	79	72.381	Capra_hircus
ENSPMEG00000004628	polr1d	91	74.038	ENSTSYG00000026817	-	78	74.038	Carlito_syrichta
ENSPMEG00000004628	polr1d	91	63.208	ENSTSYG00000034852	-	88	63.208	Carlito_syrichta
ENSPMEG00000004628	polr1d	56	60.938	ENSCAPG00000006058	-	65	60.938	Cavia_aperea
ENSPMEG00000004628	polr1d	56	60.938	ENSCPOG00000030450	-	65	60.938	Cavia_porcellus
ENSPMEG00000004628	polr1d	92	73.333	ENSCCAG00000021349	-	79	73.333	Cebus_capucinus
ENSPMEG00000004628	polr1d	92	56.190	ENSCCAG00000020191	-	76	56.190	Cebus_capucinus
ENSPMEG00000004628	polr1d	91	62.500	ENSCATG00000022900	-	77	62.500	Cercocebus_atys
ENSPMEG00000004628	polr1d	92	72.381	ENSCATG00000030710	-	79	72.381	Cercocebus_atys
ENSPMEG00000004628	polr1d	92	72.381	ENSCLAG00000017623	POLR1D	85	72.381	Chinchilla_lanigera
ENSPMEG00000004628	polr1d	89	78.218	ENSCPBG00000004719	POLR1D	100	78.218	Chrysemys_picta_bellii
ENSPMEG00000004628	polr1d	92	72.381	ENSCANG00000028632	-	79	72.381	Colobus_angolensis_palliatus
ENSPMEG00000004628	polr1d	91	72.115	ENSCANG00000037694	-	78	72.115	Colobus_angolensis_palliatus
ENSPMEG00000004628	polr1d	92	72.381	ENSCGRG00001021251	Polr1d	79	72.381	Cricetulus_griseus_chok1gshd
ENSPMEG00000004628	polr1d	92	72.381	ENSCGRG00000011639	Polr1d	79	72.381	Cricetulus_griseus_crigri
ENSPMEG00000004628	polr1d	93	85.849	ENSCSEG00000018268	polr1d	100	82.906	Cynoglossus_semilaevis
ENSPMEG00000004628	polr1d	100	91.228	ENSCVAG00000018527	polr1d	100	91.228	Cyprinodon_variegatus
ENSPMEG00000004628	polr1d	94	75.701	ENSDARG00000037570	polr1d	95	75.701	Danio_rerio
ENSPMEG00000004628	polr1d	92	71.429	ENSDNOG00000043676	-	79	71.429	Dasypus_novemcinctus
ENSPMEG00000004628	polr1d	92	70.476	ENSDNOG00000046247	-	78	70.476	Dasypus_novemcinctus
ENSPMEG00000004628	polr1d	91	73.077	ENSDORG00000029155	Polr1d	78	73.077	Dipodomys_ordii
ENSPMEG00000004628	polr1d	75	50.588	FBgn0086447	l(2)37Cg	80	50.588	Drosophila_melanogaster
ENSPMEG00000004628	polr1d	92	72.381	ENSETEG00000012797	POLR1D	85	72.381	Echinops_telfairi
ENSPMEG00000004628	polr1d	81	65.217	ENSEBUG00000011748	polr1d	64	65.217	Eptatretus_burgeri
ENSPMEG00000004628	polr1d	92	73.333	ENSEASG00005022487	POLR1D	81	73.333	Equus_asinus_asinus
ENSPMEG00000004628	polr1d	92	73.333	ENSEEUG00000013144	POLR1D	85	73.333	Erinaceus_europaeus
ENSPMEG00000004628	polr1d	97	78.571	ENSELUG00000005105	rpac2	98	78.571	Esox_lucius
ENSPMEG00000004628	polr1d	92	73.333	ENSFCAG00000030162	POLR1D	79	73.333	Felis_catus
ENSPMEG00000004628	polr1d	88	75.000	ENSFALG00000011463	POLR1D	99	75.000	Ficedula_albicollis
ENSPMEG00000004628	polr1d	92	71.429	ENSFDAG00000004463	POLR1D	79	71.429	Fukomys_damarensis
ENSPMEG00000004628	polr1d	100	90.351	ENSFHEG00000015410	polr1d	99	90.351	Fundulus_heteroclitus
ENSPMEG00000004628	polr1d	61	65.217	ENSGALG00000007470	POLR1D	68	65.217	Gallus_gallus
ENSPMEG00000004628	polr1d	100	99.123	ENSGAFG00000001693	polr1d	100	99.123	Gambusia_affinis
ENSPMEG00000004628	polr1d	94	87.850	ENSGACG00000018585	polr1d	91	87.850	Gasterosteus_aculeatus
ENSPMEG00000004628	polr1d	100	77.193	ENSGAGG00000008503	POLR1D	100	77.193	Gopherus_agassizii
ENSPMEG00000004628	polr1d	92	72.381	ENSGGOG00000004235	POLR1D	79	72.381	Gorilla_gorilla
ENSPMEG00000004628	polr1d	100	89.474	ENSHBUG00000002111	polr1d	100	89.474	Haplochromis_burtoni
ENSPMEG00000004628	polr1d	92	70.476	ENSHGLG00000003202	POLR1D	79	70.476	Heterocephalus_glaber_female
ENSPMEG00000004628	polr1d	92	70.476	ENSHGLG00100009393	POLR1D	79	70.476	Heterocephalus_glaber_male
ENSPMEG00000004628	polr1d	100	82.456	ENSHCOG00000003258	polr1d	100	82.456	Hippocampus_comes
ENSPMEG00000004628	polr1d	100	79.130	ENSIPUG00000014810	polr1d	100	79.130	Ictalurus_punctatus
ENSPMEG00000004628	polr1d	92	72.381	ENSSTOG00000013877	POLR1D	79	72.381	Ictidomys_tridecemlineatus
ENSPMEG00000004628	polr1d	92	55.238	ENSJJAG00000021667	-	61	55.238	Jaculus_jaculus
ENSPMEG00000004628	polr1d	92	70.476	ENSJJAG00000022671	-	88	70.476	Jaculus_jaculus
ENSPMEG00000004628	polr1d	100	87.719	ENSKMAG00000015256	polr1d	100	87.719	Kryptolebias_marmoratus
ENSPMEG00000004628	polr1d	100	87.719	ENSLBEG00000015919	polr1d	100	87.719	Labrus_bergylta
ENSPMEG00000004628	polr1d	94	67.593	ENSLACG00000006810	POLR1D	90	67.593	Latimeria_chalumnae
ENSPMEG00000004628	polr1d	62	85.915	ENSLOCG00000014976	polr1d	96	85.915	Lepisosteus_oculatus
ENSPMEG00000004628	polr1d	93	71.698	ENSLAFG00000032290	POLR1D	80	71.698	Loxodonta_africana
ENSPMEG00000004628	polr1d	92	72.381	ENSMFAG00000045264	POLR1D	81	72.381	Macaca_fascicularis
ENSPMEG00000004628	polr1d	92	72.381	ENSMMUG00000020386	POLR1D	91	72.381	Macaca_mulatta
ENSPMEG00000004628	polr1d	69	69.620	ENSMMUG00000041570	-	71	69.620	Macaca_mulatta
ENSPMEG00000004628	polr1d	92	72.381	ENSMNEG00000008630	-	79	72.381	Macaca_nemestrina
ENSPMEG00000004628	polr1d	91	58.654	ENSMNEG00000038120	-	76	58.654	Macaca_nemestrina
ENSPMEG00000004628	polr1d	92	72.381	ENSMLEG00000041048	-	79	72.381	Mandrillus_leucophaeus
ENSPMEG00000004628	polr1d	91	64.423	ENSMLEG00000032251	-	77	64.423	Mandrillus_leucophaeus
ENSPMEG00000004628	polr1d	88	89.000	ENSMAMG00000014834	polr1d	93	89.000	Mastacembelus_armatus
ENSPMEG00000004628	polr1d	91	85.577	ENSMZEG00005006638	polr1d	92	85.577	Maylandia_zebra
ENSPMEG00000004628	polr1d	81	79.348	ENSMGAG00000005322	POLR1D	84	79.348	Meleagris_gallopavo
ENSPMEG00000004628	polr1d	92	72.381	ENSMAUG00000001946	Polr1d	79	72.381	Mesocricetus_auratus
ENSPMEG00000004628	polr1d	92	71.429	ENSMICG00000016883	-	79	71.429	Microcebus_murinus
ENSPMEG00000004628	polr1d	86	59.184	ENSMICG00000007349	-	73	59.184	Microcebus_murinus
ENSPMEG00000004628	polr1d	92	71.429	ENSMOCG00000021288	Polr1d	79	71.429	Microtus_ochrogaster
ENSPMEG00000004628	polr1d	100	90.351	ENSMMOG00000009605	polr1d	100	90.351	Mola_mola
ENSPMEG00000004628	polr1d	100	75.439	ENSMODG00000023881	POLR1D	100	75.439	Monodelphis_domestica
ENSPMEG00000004628	polr1d	100	85.088	ENSMALG00000010652	polr1d	100	85.088	Monopterus_albus
ENSPMEG00000004628	polr1d	91	71.154	MGP_CAROLIEiJ_G0028034	Polr1d	78	71.154	Mus_caroli
ENSPMEG00000004628	polr1d	91	71.154	ENSMUSG00000029642	Polr1d	78	71.154	Mus_musculus
ENSPMEG00000004628	polr1d	91	71.154	MGP_PahariEiJ_G0024600	Polr1d	78	71.154	Mus_pahari
ENSPMEG00000004628	polr1d	91	71.154	MGP_SPRETEiJ_G0029032	Polr1d	78	71.154	Mus_spretus
ENSPMEG00000004628	polr1d	92	72.381	ENSMLUG00000027169	-	79	72.381	Myotis_lucifugus
ENSPMEG00000004628	polr1d	92	66.667	ENSMLUG00000004118	-	79	66.667	Myotis_lucifugus
ENSPMEG00000004628	polr1d	98	69.643	ENSNGAG00000006014	Polr1d	97	69.643	Nannospalax_galili
ENSPMEG00000004628	polr1d	100	89.474	ENSNBRG00000020327	polr1d	100	89.474	Neolamprologus_brichardi
ENSPMEG00000004628	polr1d	92	72.381	ENSNLEG00000000358	POLR1D	79	72.381	Nomascus_leucogenys
ENSPMEG00000004628	polr1d	92	72.381	ENSODEG00000005294	-	79	72.381	Octodon_degus
ENSPMEG00000004628	polr1d	92	60.952	ENSODEG00000014801	-	76	60.952	Octodon_degus
ENSPMEG00000004628	polr1d	93	80.189	ENSOANG00000008708	-	98	80.189	Ornithorhynchus_anatinus
ENSPMEG00000004628	polr1d	92	72.381	ENSOCUG00000015706	POLR1D	64	72.381	Oryctolagus_cuniculus
ENSPMEG00000004628	polr1d	100	85.088	ENSORLG00000010257	polr1d	100	85.088	Oryzias_latipes
ENSPMEG00000004628	polr1d	100	85.088	ENSORLG00020000533	polr1d	77	85.088	Oryzias_latipes_hni
ENSPMEG00000004628	polr1d	100	85.965	ENSORLG00015013267	polr1d	75	85.965	Oryzias_latipes_hsok
ENSPMEG00000004628	polr1d	100	85.088	ENSOMEG00000014912	polr1d	76	85.088	Oryzias_melastigma
ENSPMEG00000004628	polr1d	98	69.643	ENSOGAG00000014601	POLR1D	84	69.643	Otolemur_garnettii
ENSPMEG00000004628	polr1d	92	72.381	ENSOARG00000017005	POLR1D	81	72.381	Ovis_aries
ENSPMEG00000004628	polr1d	92	72.381	ENSPPAG00000028138	POLR1D	79	72.381	Pan_paniscus
ENSPMEG00000004628	polr1d	92	73.333	ENSPPRG00000003381	POLR1D	79	73.333	Panthera_pardus
ENSPMEG00000004628	polr1d	92	73.333	ENSPTIG00000018137	POLR1D	79	73.333	Panthera_tigris_altaica
ENSPMEG00000004628	polr1d	92	72.381	ENSPTRG00000005734	POLR1D	79	72.381	Pan_troglodytes
ENSPMEG00000004628	polr1d	92	72.381	ENSPANG00000020259	-	79	72.381	Papio_anubis
ENSPMEG00000004628	polr1d	91	63.462	ENSPANG00000035051	-	77	63.462	Papio_anubis
ENSPMEG00000004628	polr1d	89	80.198	ENSPKIG00000021891	polr1d	100	62.205	Paramormyrops_kingsleyae
ENSPMEG00000004628	polr1d	100	73.684	ENSPSIG00000011822	POLR1D	88	73.684	Pelodiscus_sinensis
ENSPMEG00000004628	polr1d	100	84.211	ENSPMGG00000010359	polr1d	99	84.211	Periophthalmus_magnuspinnatus
ENSPMEG00000004628	polr1d	100	76.316	ENSPMGG00000012998	POLR1D	84	76.316	Periophthalmus_magnuspinnatus
ENSPMEG00000004628	polr1d	92	71.429	ENSPEMG00000006336	-	81	71.429	Peromyscus_maniculatus_bairdii
ENSPMEG00000004628	polr1d	95	56.481	ENSPMAG00000004228	polr1d	91	56.481	Petromyzon_marinus
ENSPMEG00000004628	polr1d	100	74.561	ENSPCIG00000001673	POLR1D	100	74.561	Phascolarctos_cinereus
ENSPMEG00000004628	polr1d	100	100.000	ENSPFOG00000023343	polr1d	100	100.000	Poecilia_formosa
ENSPMEG00000004628	polr1d	100	100.000	ENSPLAG00000009675	polr1d	100	100.000	Poecilia_latipinna
ENSPMEG00000004628	polr1d	100	100.000	ENSPREG00000022032	polr1d	100	100.000	Poecilia_reticulata
ENSPMEG00000004628	polr1d	92	70.476	ENSPCOG00000028175	POLR1D	79	70.476	Propithecus_coquereli
ENSPMEG00000004628	polr1d	100	89.474	ENSPNYG00000000107	polr1d	100	89.474	Pundamilia_nyererei
ENSPMEG00000004628	polr1d	96	72.477	ENSPNAG00000001512	polr1d	100	69.748	Pygocentrus_nattereri
ENSPMEG00000004628	polr1d	92	72.381	ENSRBIG00000036378	-	79	72.381	Rhinopithecus_bieti
ENSPMEG00000004628	polr1d	91	70.192	ENSRBIG00000000336	-	78	70.192	Rhinopithecus_bieti
ENSPMEG00000004628	polr1d	91	71.154	ENSRROG00000026751	-	78	71.154	Rhinopithecus_roxellana
ENSPMEG00000004628	polr1d	92	72.381	ENSRROG00000042232	-	79	72.381	Rhinopithecus_roxellana
ENSPMEG00000004628	polr1d	79	52.222	YNL113W	RPC19	70	48.485	Saccharomyces_cerevisiae
ENSPMEG00000004628	polr1d	92	72.381	ENSSBOG00000028482	-	79	72.381	Saimiri_boliviensis_boliviensis
ENSPMEG00000004628	polr1d	87	69.697	ENSSBOG00000030146	-	73	69.697	Saimiri_boliviensis_boliviensis
ENSPMEG00000004628	polr1d	97	72.973	ENSSHAG00000001190	POLR1D	86	72.973	Sarcophilus_harrisii
ENSPMEG00000004628	polr1d	94	79.630	ENSSFOG00015011375	polr1d	95	79.630	Scleropages_formosus
ENSPMEG00000004628	polr1d	100	88.596	ENSSMAG00000011861	polr1d	100	88.596	Scophthalmus_maximus
ENSPMEG00000004628	polr1d	100	87.719	ENSSDUG00000011930	polr1d	100	87.719	Seriola_dumerili
ENSPMEG00000004628	polr1d	99	79.825	ENSSLDG00000023871	polr1d	97	79.825	Seriola_lalandi_dorsalis
ENSPMEG00000004628	polr1d	92	73.333	ENSSARG00000007840	POLR1D	79	73.333	Sorex_araneus
ENSPMEG00000004628	polr1d	92	73.333	ENSSPUG00000005786	POLR1D	95	70.270	Sphenodon_punctatus
ENSPMEG00000004628	polr1d	100	88.596	ENSSPAG00000011764	polr1d	100	88.596	Stegastes_partitus
ENSPMEG00000004628	polr1d	92	71.429	ENSSSCG00000009310	POLR1D	79	71.429	Sus_scrofa
ENSPMEG00000004628	polr1d	82	78.495	ENSTGUG00000005450	POLR1D	97	78.495	Taeniopygia_guttata
ENSPMEG00000004628	polr1d	100	82.456	ENSTRUG00000019741	polr1d	100	82.456	Takifugu_rubripes
ENSPMEG00000004628	polr1d	98	68.750	ENSTBEG00000007006	POLR1D	90	68.750	Tupaia_belangeri
ENSPMEG00000004628	polr1d	92	73.333	ENSUAMG00000011413	POLR1D	79	73.333	Ursus_americanus
ENSPMEG00000004628	polr1d	92	73.333	ENSUMAG00000016968	POLR1D	82	73.333	Ursus_maritimus
ENSPMEG00000004628	polr1d	92	73.333	ENSVVUG00000009216	POLR1D	79	73.333	Vulpes_vulpes
ENSPMEG00000004628	polr1d	89	98.020	ENSXCOG00000011731	polr1d	78	98.020	Xiphophorus_couchianus
ENSPMEG00000004628	polr1d	89	97.030	ENSXMAG00000017538	polr1d	78	97.030	Xiphophorus_maculatus