EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000004708 (Gene tree)
Gene ID: 106917861
Gene Symbol: vars
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 21166 bases
Position: chrKQ551254.1:318087-339252
Accession: 106917861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003562	Val_tRNA-synt_C	PF10458.9	1.6e-05	1	1
ENSPMEP00000003562	tRNA-synt_1g	PF09334.11	8.5e-13	1	1
ENSPMEP00000003562	Anticodon_1	PF08264.13	5.2e-35	1	1
ENSPMEP00000003562	tRNA-synt_1	PF00133.22	1.8e-208	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000010653	-	7365	XM_014987130	ENSPMEP00000003562	1274 (aa)	XP_014842616	UPI00072DA574

Gene Model

Click here to download ENSPMEG00000004708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000004708	vars	78	47.976	ENSPMEG00000011123	vars2	93	48.067

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004708	vars	100	65.603	ENSG00000204394	VARS	99	72.699	Homo_sapiens
ENSPMEG00000004708	vars	94	90.100	ENSAPOG00000020921	vars	96	90.100	Acanthochromis_polyacanthus
ENSPMEG00000004708	vars	94	90.100	ENSAPOG00000020691	vars	96	90.100	Acanthochromis_polyacanthus
ENSPMEG00000004708	vars	100	65.708	ENSAMEG00000006417	VARS	100	65.763	Ailuropoda_melanoleuca
ENSPMEG00000004708	vars	100	89.420	ENSACIG00000013752	vars	100	89.420	Amphilophus_citrinellus
ENSPMEG00000004708	vars	100	90.502	ENSAOCG00000002447	vars	99	90.502	Amphiprion_ocellaris
ENSPMEG00000004708	vars	100	90.345	ENSAPEG00000010638	vars	99	90.345	Amphiprion_percula
ENSPMEG00000004708	vars	100	85.748	ENSATEG00000020219	vars	100	85.435	Anabas_testudineus
ENSPMEG00000004708	vars	90	71.577	ENSACAG00000029133	-	99	71.577	Anolis_carolinensis
ENSPMEG00000004708	vars	100	65.603	ENSANAG00000015453	VARS	100	65.603	Aotus_nancymaae
ENSPMEG00000004708	vars	100	91.066	ENSACLG00000025699	vars	97	91.066	Astatotilapia_calliptera
ENSPMEG00000004708	vars	96	79.640	ENSAMXG00000017716	vars	96	79.640	Astyanax_mexicanus
ENSPMEG00000004708	vars	100	65.992	ENSBTAG00000005631	VARS	100	65.992	Bos_taurus
ENSPMEG00000004708	vars	100	65.447	ENSCJAG00000002604	VARS	100	65.447	Callithrix_jacchus
ENSPMEG00000004708	vars	100	65.292	ENSCAFG00000000636	VARS	100	65.349	Canis_familiaris
ENSPMEG00000004708	vars	94	66.556	ENSCAFG00020020790	VARS	96	66.556	Canis_lupus_dingo
ENSPMEG00000004708	vars	100	65.837	ENSCHIG00000011008	VARS	100	65.837	Capra_hircus
ENSPMEG00000004708	vars	100	65.447	ENSTSYG00000001567	VARS	100	65.447	Carlito_syrichta
ENSPMEG00000004708	vars	91	68.739	ENSCAPG00000013736	VARS	98	68.426	Cavia_aperea
ENSPMEG00000004708	vars	100	65.346	ENSCPOG00000000870	VARS	100	65.058	Cavia_porcellus
ENSPMEG00000004708	vars	100	65.759	ENSCCAG00000035656	VARS	100	65.603	Cebus_capucinus
ENSPMEG00000004708	vars	100	65.812	ENSCATG00000022394	VARS	100	65.837	Cercocebus_atys
ENSPMEG00000004708	vars	93	64.548	ENSCLAG00000009470	VARS	97	64.245	Chinchilla_lanigera
ENSPMEG00000004708	vars	100	65.657	ENSCSAG00000008784	VARS	100	65.681	Chlorocebus_sabaeus
ENSPMEG00000004708	vars	77	75.025	ENSCPBG00000007943	VARS	96	75.025	Chrysemys_picta_bellii
ENSPMEG00000004708	vars	100	65.812	ENSCANG00000033570	VARS	100	65.837	Colobus_angolensis_palliatus
ENSPMEG00000004708	vars	100	65.447	ENSCGRG00001005686	Vars	100	65.525	Cricetulus_griseus_chok1gshd
ENSPMEG00000004708	vars	93	63.539	ENSCGRG00000013352	Vars	78	63.621	Cricetulus_griseus_crigri
ENSPMEG00000004708	vars	100	82.759	ENSCSEG00000019652	vars	100	82.524	Cynoglossus_semilaevis
ENSPMEG00000004708	vars	100	95.219	ENSCVAG00000022398	vars	100	95.219	Cyprinodon_variegatus
ENSPMEG00000004708	vars	100	84.417	ENSDARG00000044575	vars	100	84.495	Danio_rerio
ENSPMEG00000004708	vars	85	68.857	ENSDORG00000016433	Vars	99	68.947	Dipodomys_ordii
ENSPMEG00000004708	vars	68	74.322	ENSETEG00000003824	VARS	77	74.322	Echinops_telfairi
ENSPMEG00000004708	vars	52	72.444	ENSEBUG00000007086	vars	83	72.444	Eptatretus_burgeri
ENSPMEG00000004708	vars	57	65.205	ENSEBUG00000004637	vars	100	65.205	Eptatretus_burgeri
ENSPMEG00000004708	vars	100	66.148	ENSEASG00005015673	VARS	100	66.148	Equus_asinus_asinus
ENSPMEG00000004708	vars	100	66.096	ENSECAG00000014620	VARS	100	66.330	Equus_caballus
ENSPMEG00000004708	vars	72	71.429	ENSEEUG00000004116	VARS	73	71.429	Erinaceus_europaeus
ENSPMEG00000004708	vars	100	83.619	ENSELUG00000006550	vars	97	83.541	Esox_lucius
ENSPMEG00000004708	vars	100	65.837	ENSFCAG00000004510	VARS	100	65.992	Felis_catus
ENSPMEG00000004708	vars	83	71.019	ENSFDAG00000011401	VARS	100	70.833	Fukomys_damarensis
ENSPMEG00000004708	vars	100	93.260	ENSFHEG00000010672	vars	100	93.730	Fundulus_heteroclitus
ENSPMEG00000004708	vars	100	81.386	ENSGMOG00000014908	vars	100	81.542	Gadus_morhua
ENSPMEG00000004708	vars	100	97.645	ENSGAFG00000021630	vars	100	97.645	Gambusia_affinis
ENSPMEG00000004708	vars	100	84.038	ENSGACG00000009601	vars	100	84.272	Gasterosteus_aculeatus
ENSPMEG00000004708	vars	50	57.969	ENSGAGG00000006508	-	91	60.156	Gopherus_agassizii
ENSPMEG00000004708	vars	100	65.992	ENSGGOG00000011364	VARS	100	65.992	Gorilla_gorilla
ENSPMEG00000004708	vars	100	90.987	ENSHBUG00000017151	vars	97	90.987	Haplochromis_burtoni
ENSPMEG00000004708	vars	100	65.265	ENSHGLG00000011646	VARS	100	65.265	Heterocephalus_glaber_female
ENSPMEG00000004708	vars	94	62.080	ENSHGLG00100018062	VARS	99	61.721	Heterocephalus_glaber_male
ENSPMEG00000004708	vars	99	85.145	ENSHCOG00000012198	vars	99	85.223	Hippocampus_comes
ENSPMEG00000004708	vars	100	83.646	ENSIPUG00000005218	vars	100	83.725	Ictalurus_punctatus
ENSPMEG00000004708	vars	100	66.070	ENSSTOG00000013112	VARS	100	65.992	Ictidomys_tridecemlineatus
ENSPMEG00000004708	vars	100	65.474	ENSJJAG00000019749	-	100	65.160	Jaculus_jaculus
ENSPMEG00000004708	vars	100	53.479	ENSJJAG00000015343	-	99	54.964	Jaculus_jaculus
ENSPMEG00000004708	vars	100	87.912	ENSKMAG00000009455	vars	100	87.912	Kryptolebias_marmoratus
ENSPMEG00000004708	vars	100	85.747	ENSLBEG00000010341	vars	100	85.086	Labrus_bergylta
ENSPMEG00000004708	vars	94	67.050	ENSLACG00000015232	VARS	99	67.130	Latimeria_chalumnae
ENSPMEG00000004708	vars	100	75.137	ENSLOCG00000004240	vars	100	74.902	Lepisosteus_oculatus
ENSPMEG00000004708	vars	100	65.576	ENSLAFG00000023090	VARS	100	65.576	Loxodonta_africana
ENSPMEG00000004708	vars	100	65.657	ENSMFAG00000001032	VARS	100	65.681	Macaca_fascicularis
ENSPMEG00000004708	vars	100	65.657	ENSMMUG00000006828	VARS	100	65.681	Macaca_mulatta
ENSPMEG00000004708	vars	100	65.657	ENSMNEG00000042072	VARS	100	65.681	Macaca_nemestrina
ENSPMEG00000004708	vars	100	65.734	ENSMLEG00000039307	VARS	100	65.759	Mandrillus_leucophaeus
ENSPMEG00000004708	vars	100	88.932	ENSMAMG00000003949	vars	100	88.932	Mastacembelus_armatus
ENSPMEG00000004708	vars	100	91.144	ENSMZEG00005018327	vars	97	91.144	Maylandia_zebra
ENSPMEG00000004708	vars	100	65.292	ENSMAUG00000006715	Vars	100	65.370	Mesocricetus_auratus
ENSPMEG00000004708	vars	100	65.994	ENSMICG00000003548	VARS	100	65.914	Microcebus_murinus
ENSPMEG00000004708	vars	100	64.330	ENSMOCG00000015404	Vars	100	64.330	Microtus_ochrogaster
ENSPMEG00000004708	vars	100	86.107	ENSMMOG00000015801	vars	100	86.028	Mola_mola
ENSPMEG00000004708	vars	100	65.837	ENSMODG00000015204	-	100	65.759	Monodelphis_domestica
ENSPMEG00000004708	vars	99	89.272	ENSMALG00000022532	vars	99	89.272	Monopterus_albus
ENSPMEG00000004708	vars	100	66.044	MGP_CAROLIEiJ_G0021491	Vars	100	66.044	Mus_caroli
ENSPMEG00000004708	vars	100	65.966	ENSMUSG00000007029	Vars	100	65.966	Mus_musculus
ENSPMEG00000004708	vars	100	65.810	MGP_PahariEiJ_G0020486	Vars	100	65.810	Mus_pahari
ENSPMEG00000004708	vars	100	66.044	MGP_SPRETEiJ_G0022396	Vars	100	66.044	Mus_spretus
ENSPMEG00000004708	vars	100	65.603	ENSMPUG00000010821	VARS	100	65.659	Mustela_putorius_furo
ENSPMEG00000004708	vars	78	68.594	ENSMLUG00000013126	VARS	100	68.594	Myotis_lucifugus
ENSPMEG00000004708	vars	100	65.421	ENSNGAG00000012151	Vars	100	65.421	Nannospalax_galili
ENSPMEG00000004708	vars	100	90.674	ENSNBRG00000020520	vars	100	90.674	Neolamprologus_brichardi
ENSPMEG00000004708	vars	100	65.681	ENSNLEG00000006351	VARS	100	65.681	Nomascus_leucogenys
ENSPMEG00000004708	vars	94	72.946	ENSMEUG00000011378	VARS	100	64.174	Notamacropus_eugenii
ENSPMEG00000004708	vars	100	65.603	ENSOPRG00000003607	VARS	100	65.681	Ochotona_princeps
ENSPMEG00000004708	vars	100	64.953	ENSODEG00000017681	VARS	100	64.953	Octodon_degus
ENSPMEG00000004708	vars	100	90.312	ENSONIG00000013064	vars	100	91.638	Oreochromis_niloticus
ENSPMEG00000004708	vars	77	67.609	ENSOANG00000005400	VARS	98	67.609	Ornithorhynchus_anatinus
ENSPMEG00000004708	vars	100	64.330	ENSOCUG00000022463	VARS	100	64.065	Oryctolagus_cuniculus
ENSPMEG00000004708	vars	100	89.105	ENSORLG00000013063	vars	100	89.183	Oryzias_latipes
ENSPMEG00000004708	vars	100	89.523	ENSORLG00020003504	vars	100	89.523	Oryzias_latipes_hni
ENSPMEG00000004708	vars	100	89.828	ENSORLG00015009001	vars	100	89.828	Oryzias_latipes_hsok
ENSPMEG00000004708	vars	100	90.063	ENSOMEG00000015016	vars	100	90.063	Oryzias_melastigma
ENSPMEG00000004708	vars	100	65.447	ENSOGAG00000007515	VARS	100	65.447	Otolemur_garnettii
ENSPMEG00000004708	vars	100	65.603	ENSPPAG00000034012	VARS	100	65.603	Pan_paniscus
ENSPMEG00000004708	vars	100	65.837	ENSPPRG00000014855	VARS	100	65.992	Panthera_pardus
ENSPMEG00000004708	vars	86	69.680	ENSPTIG00000010462	VARS	94	69.628	Panthera_tigris_altaica
ENSPMEG00000004708	vars	100	65.525	ENSPTRG00000017985	VARS	100	65.525	Pan_troglodytes
ENSPMEG00000004708	vars	100	64.192	ENSPANG00000014565	VARS	100	64.214	Papio_anubis
ENSPMEG00000004708	vars	100	80.311	ENSPKIG00000016304	vars	100	80.311	Paramormyrops_kingsleyae
ENSPMEG00000004708	vars	100	84.144	ENSPMGG00000023909	vars	100	83.909	Periophthalmus_magnuspinnatus
ENSPMEG00000004708	vars	100	65.292	ENSPEMG00000006639	Vars	100	65.370	Peromyscus_maniculatus_bairdii
ENSPMEG00000004708	vars	100	65.603	ENSPCIG00000018553	VARS	100	65.525	Phascolarctos_cinereus
ENSPMEG00000004708	vars	100	99.765	ENSPFOG00000015690	vars	100	99.765	Poecilia_formosa
ENSPMEG00000004708	vars	100	99.451	ENSPLAG00000009590	vars	100	99.451	Poecilia_latipinna
ENSPMEG00000004708	vars	100	92.151	ENSPREG00000013264	vars	100	92.151	Poecilia_reticulata
ENSPMEG00000004708	vars	100	63.919	ENSPPYG00000016460	VARS	100	64.280	Pongo_abelii
ENSPMEG00000004708	vars	86	66.963	ENSPCAG00000013565	VARS	86	66.963	Procavia_capensis
ENSPMEG00000004708	vars	100	65.630	ENSPCOG00000010942	VARS	100	65.863	Propithecus_coquereli
ENSPMEG00000004708	vars	100	63.170	ENSPVAG00000012403	VARS	100	63.424	Pteropus_vampyrus
ENSPMEG00000004708	vars	100	91.066	ENSPNYG00000022511	vars	100	91.066	Pundamilia_nyererei
ENSPMEG00000004708	vars	100	83.919	ENSPNAG00000020962	vars	100	84.256	Pygocentrus_nattereri
ENSPMEG00000004708	vars	100	65.603	ENSRNOG00000000867	Vars	100	65.447	Rattus_norvegicus
ENSPMEG00000004708	vars	100	65.734	ENSRBIG00000041669	VARS	100	65.759	Rhinopithecus_bieti
ENSPMEG00000004708	vars	100	65.734	ENSRROG00000045490	VARS	100	65.759	Rhinopithecus_roxellana
ENSPMEG00000004708	vars	100	65.447	ENSSBOG00000035402	VARS	100	65.447	Saimiri_boliviensis_boliviensis
ENSPMEG00000004708	vars	100	64.792	ENSSHAG00000006937	VARS	100	64.823	Sarcophilus_harrisii
ENSPMEG00000004708	vars	100	80.623	ENSSFOG00015014272	vars	100	80.623	Scleropages_formosus
ENSPMEG00000004708	vars	100	88.106	ENSSMAG00000009596	vars	99	88.185	Scophthalmus_maximus
ENSPMEG00000004708	vars	100	90.376	ENSSDUG00000014177	vars	100	90.610	Seriola_dumerili
ENSPMEG00000004708	vars	100	90.063	ENSSLDG00000025316	vars	100	90.297	Seriola_lalandi_dorsalis
ENSPMEG00000004708	vars	100	89.639	ENSSPAG00000017068	vars	100	89.796	Stegastes_partitus
ENSPMEG00000004708	vars	100	65.319	ENSSSCG00000038950	VARS	100	65.552	Sus_scrofa
ENSPMEG00000004708	vars	81	82.381	ENSTRUG00000012307	vars	97	82.353	Takifugu_rubripes
ENSPMEG00000004708	vars	100	85.893	ENSTNIG00000008011	vars	100	85.893	Tetraodon_nigroviridis
ENSPMEG00000004708	vars	100	60.280	ENSTTRG00000014128	VARS	100	60.280	Tursiops_truncatus
ENSPMEG00000004708	vars	100	64.230	ENSUAMG00000010424	VARS	100	64.358	Ursus_americanus
ENSPMEG00000004708	vars	100	60.717	ENSUMAG00000013486	VARS	100	60.873	Ursus_maritimus
ENSPMEG00000004708	vars	100	65.734	ENSVVUG00000021323	VARS	100	65.474	Vulpes_vulpes
ENSPMEG00000004708	vars	100	64.606	ENSXETG00000024076	vars	100	64.330	Xenopus_tropicalis
ENSPMEG00000004708	vars	100	94.270	ENSXCOG00000019172	vars	100	94.270	Xiphophorus_couchianus
ENSPMEG00000004708	vars	100	97.645	ENSXMAG00000010927	vars	100	97.645	Xiphophorus_maculatus