EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000004735 (Gene tree)
Gene ID: 106921710
Gene Symbol: -
Alias: -
Full Name: zinc finger RANBP2-type containing 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 16054 bases
Position: chrKQ551490.1:176511-192564
Accession: 106921710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003535	zf-RanBP	PF00641.18	2.4e-13	1	2
ENSPMEP00000003535	zf-RanBP	PF00641.18	2.4e-13	2	2
ENSPMEP00000023238	zf-RanBP	PF00641.18	2.7e-13	1	2
ENSPMEP00000023238	zf-RanBP	PF00641.18	2.7e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000010681	-	2746	XM_014993564	ENSPMEP00000023238	708 (aa)	XP_014849050	UPI00044486E9
ENSPMET00000010696	-	2674	-	ENSPMEP00000003535	684 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000004735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000004735	-	99	78.415	ENSPMEG00000011255	zranb1b	99	79.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004735	-	99	76.244	ENSCHOG00000007307	-	98	76.244	Choloepus_hoffmanni
ENSPMEG00000004735	-	99	95.000	ENSCVAG00000017030	-	99	95.000	Cyprinodon_variegatus
ENSPMEG00000004735	-	100	97.175	ENSGAFG00000010248	-	95	97.175	Gambusia_affinis
ENSPMEG00000004735	-	100	100.000	ENSPFOG00000010897	-	99	100.000	Poecilia_formosa
ENSPMEG00000004735	-	100	99.859	ENSPLAG00000000129	-	100	99.859	Poecilia_latipinna
ENSPMEG00000004735	-	100	98.446	ENSPREG00000006907	-	96	98.446	Poecilia_reticulata
ENSPMEG00000004735	-	100	98.164	ENSXMAG00000029327	-	100	98.164	Xiphophorus_maculatus