EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000004747 (Gene tree)
Gene ID: 106928969
Gene Symbol: fubp1
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 9793 bases
Position: chrKQ552058.1:50511-60303
Accession: 106928969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003556	KH_1	PF00013.29	3.3e-68	1	4
ENSPMEP00000003556	KH_1	PF00013.29	3.3e-68	2	4
ENSPMEP00000003556	KH_1	PF00013.29	3.3e-68	3	4
ENSPMEP00000003556	KH_1	PF00013.29	3.3e-68	4	4
ENSPMEP00000003541	KH_1	PF00013.29	3.7e-68	1	4
ENSPMEP00000003541	KH_1	PF00013.29	3.7e-68	2	4
ENSPMEP00000003541	KH_1	PF00013.29	3.7e-68	3	4
ENSPMEP00000003541	KH_1	PF00013.29	3.7e-68	4	4
ENSPMEP00000003541	KH_2	PF07650.17	7.5e-21	1	1
ENSPMEP00000003556	KH_2	PF07650.17	1.2e-20	1	1
ENSPMEP00000003541	DUF1897	PF09005.10	3.8e-12	1	1
ENSPMEP00000003556	DUF1897	PF09005.10	4.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000010667	-	1930	XM_015005594	ENSPMEP00000003556	600 (aa)	XP_014861080	-
ENSPMET00000010693	-	1851	-	ENSPMEP00000003541	616 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000004747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000004747	fubp1	60	36.364	ENSPMEG00000019140	-	54	36.364
ENSPMEG00000004747	fubp1	63	41.667	ENSPMEG00000007633	PCBP2	67	43.939
ENSPMEG00000004747	fubp1	61	37.500	ENSPMEG00000012762	zgc:110045	64	40.000
ENSPMEG00000004747	fubp1	57	37.879	ENSPMEG00000016376	nova1	54	37.879
ENSPMEG00000004747	fubp1	98	50.250	ENSPMEG00000014351	-	98	65.385
ENSPMEG00000004747	fubp1	60	33.577	ENSPMEG00000005988	igf2bp1	60	30.464
ENSPMEG00000004747	fubp1	56	37.037	ENSPMEG00000021239	pcbp3	63	37.037
ENSPMEG00000004747	fubp1	65	41.250	ENSPMEG00000021528	pcbp2	96	44.444
ENSPMEG00000004747	fubp1	54	37.333	ENSPMEG00000006653	-	87	35.065
ENSPMEG00000004747	fubp1	59	31.928	ENSPMEG00000007820	igf2bp3	67	31.073
ENSPMEG00000004747	fubp1	97	49.508	ENSPMEG00000016672	FUBP3	96	48.282
ENSPMEG00000004747	fubp1	100	51.593	ENSPMEG00000014049	khsrp	97	52.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004747	fubp1	73	78.587	ENSG00000162613	FUBP1	99	72.558	Homo_sapiens
ENSPMEG00000004747	fubp1	99	96.352	ENSAPOG00000014845	fubp1	98	92.160	Acanthochromis_polyacanthus
ENSPMEG00000004747	fubp1	73	74.636	ENSAMEG00000007372	FUBP1	99	70.210	Ailuropoda_melanoleuca
ENSPMEG00000004747	fubp1	99	90.224	ENSACIG00000020024	fubp1	99	90.224	Amphilophus_citrinellus
ENSPMEG00000004747	fubp1	96	90.832	ENSAPEG00000012232	fubp1	99	90.032	Amphiprion_percula
ENSPMEG00000004747	fubp1	99	96.309	ENSATEG00000018619	fubp1	98	93.669	Anabas_testudineus
ENSPMEG00000004747	fubp1	68	80.630	ENSAPLG00000005965	FUBP1	100	73.510	Anas_platyrhynchos
ENSPMEG00000004747	fubp1	73	75.264	ENSACAG00000006310	FUBP1	96	65.007	Anolis_carolinensis
ENSPMEG00000004747	fubp1	99	96.656	ENSACLG00000006708	fubp1	99	90.422	Astatotilapia_calliptera
ENSPMEG00000004747	fubp1	87	85.338	ENSAMXG00000005525	fubp1	100	85.178	Astyanax_mexicanus
ENSPMEG00000004747	fubp1	73	78.808	ENSCJAG00000007062	FUBP1	99	72.671	Callithrix_jacchus
ENSPMEG00000004747	fubp1	73	78.384	ENSCAFG00000020361	FUBP1	99	72.713	Canis_familiaris
ENSPMEG00000004747	fubp1	68	79.904	ENSTSYG00000000148	FUBP1	99	72.893	Carlito_syrichta
ENSPMEG00000004747	fubp1	58	84.677	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSPMEG00000004747	fubp1	73	78.384	ENSCPOG00000002757	FUBP1	98	72.531	Cavia_porcellus
ENSPMEG00000004747	fubp1	73	64.000	ENSCCAG00000036537	FUBP1	99	63.006	Cebus_capucinus
ENSPMEG00000004747	fubp1	73	78.166	ENSCATG00000042126	FUBP1	99	72.558	Cercocebus_atys
ENSPMEG00000004747	fubp1	73	78.384	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSPMEG00000004747	fubp1	73	78.166	ENSCSAG00000001402	FUBP1	99	72.558	Chlorocebus_sabaeus
ENSPMEG00000004747	fubp1	73	78.166	ENSCHOG00000008177	FUBP1	98	72.868	Choloepus_hoffmanni
ENSPMEG00000004747	fubp1	73	80.134	ENSCGRG00001007103	Fubp1	99	72.628	Cricetulus_griseus_chok1gshd
ENSPMEG00000004747	fubp1	68	80.144	ENSCGRG00000003372	Fubp1	99	72.533	Cricetulus_griseus_crigri
ENSPMEG00000004747	fubp1	100	89.886	ENSCSEG00000021412	fubp1	99	89.590	Cynoglossus_semilaevis
ENSPMEG00000004747	fubp1	99	98.161	ENSCVAG00000014487	fubp1	91	98.161	Cyprinodon_variegatus
ENSPMEG00000004747	fubp1	99	81.981	ENSDARG00000029248	fubp1	99	78.825	Danio_rerio
ENSPMEG00000004747	fubp1	69	56.190	ENSDNOG00000034565	-	87	58.147	Dasypus_novemcinctus
ENSPMEG00000004747	fubp1	73	78.384	ENSDORG00000016534	Fubp1	98	72.713	Dipodomys_ordii
ENSPMEG00000004747	fubp1	76	76.608	ENSETEG00000000948	-	59	76.901	Echinops_telfairi
ENSPMEG00000004747	fubp1	85	47.091	ENSEBUG00000016143	fubp1	79	47.619	Eptatretus_burgeri
ENSPMEG00000004747	fubp1	72	82.432	ENSEEUG00000001287	FUBP1	87	70.431	Erinaceus_europaeus
ENSPMEG00000004747	fubp1	99	84.679	ENSELUG00000007990	fubp1	99	81.153	Esox_lucius
ENSPMEG00000004747	fubp1	73	79.379	ENSFALG00000005768	FUBP1	98	72.939	Ficedula_albicollis
ENSPMEG00000004747	fubp1	73	78.166	ENSFDAG00000014210	FUBP1	98	72.558	Fukomys_damarensis
ENSPMEG00000004747	fubp1	99	98.997	ENSFHEG00000005230	fubp1	99	91.930	Fundulus_heteroclitus
ENSPMEG00000004747	fubp1	99	85.032	ENSGMOG00000003370	fubp1	99	85.032	Gadus_morhua
ENSPMEG00000004747	fubp1	73	79.867	ENSGALG00000008939	FUBP1	99	73.717	Gallus_gallus
ENSPMEG00000004747	fubp1	99	97.865	ENSGAFG00000020972	fubp1	99	91.121	Gambusia_affinis
ENSPMEG00000004747	fubp1	100	88.424	ENSGACG00000016563	fubp1	99	89.168	Gasterosteus_aculeatus
ENSPMEG00000004747	fubp1	99	96.823	ENSHBUG00000009835	fubp1	100	93.151	Haplochromis_burtoni
ENSPMEG00000004747	fubp1	73	78.384	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSPMEG00000004747	fubp1	75	73.650	ENSHGLG00000002808	-	99	65.149	Heterocephalus_glaber_female
ENSPMEG00000004747	fubp1	73	78.384	ENSHGLG00100003417	-	99	72.377	Heterocephalus_glaber_male
ENSPMEG00000004747	fubp1	75	74.510	ENSHGLG00100001414	-	99	65.777	Heterocephalus_glaber_male
ENSPMEG00000004747	fubp1	99	91.667	ENSHCOG00000000910	fubp1	99	86.265	Hippocampus_comes
ENSPMEG00000004747	fubp1	99	85.216	ENSIPUG00000009896	fubp1	99	81.675	Ictalurus_punctatus
ENSPMEG00000004747	fubp1	73	78.971	ENSSTOG00000014312	FUBP1	100	72.713	Ictidomys_tridecemlineatus
ENSPMEG00000004747	fubp1	73	79.018	ENSJJAG00000020069	Fubp1	99	72.488	Jaculus_jaculus
ENSPMEG00000004747	fubp1	99	97.655	ENSKMAG00000018897	fubp1	99	93.579	Kryptolebias_marmoratus
ENSPMEG00000004747	fubp1	99	92.834	ENSLBEG00000012700	fubp1	98	85.460	Labrus_bergylta
ENSPMEG00000004747	fubp1	99	81.220	ENSLOCG00000003745	fubp1	92	80.960	Lepisosteus_oculatus
ENSPMEG00000004747	fubp1	73	75.262	ENSLAFG00000003273	FUBP1	99	74.819	Loxodonta_africana
ENSPMEG00000004747	fubp1	73	78.587	ENSMFAG00000031825	FUBP1	99	72.516	Macaca_fascicularis
ENSPMEG00000004747	fubp1	73	78.747	ENSMMUG00000002899	FUBP1	98	73.618	Macaca_mulatta
ENSPMEG00000004747	fubp1	73	78.166	ENSMNEG00000045212	FUBP1	99	72.558	Macaca_nemestrina
ENSPMEG00000004747	fubp1	99	95.074	ENSMAMG00000007489	fubp1	92	95.074	Mastacembelus_armatus
ENSPMEG00000004747	fubp1	99	96.656	ENSMZEG00005024298	fubp1	99	92.628	Maylandia_zebra
ENSPMEG00000004747	fubp1	68	80.676	ENSMGAG00000009424	FUBP1	99	73.719	Meleagris_gallopavo
ENSPMEG00000004747	fubp1	73	78.603	ENSMAUG00000016428	Fubp1	98	72.685	Mesocricetus_auratus
ENSPMEG00000004747	fubp1	73	79.075	ENSMOCG00000014751	Fubp1	99	73.776	Microtus_ochrogaster
ENSPMEG00000004747	fubp1	88	92.196	ENSMMOG00000019463	fubp1	99	92.196	Mola_mola
ENSPMEG00000004747	fubp1	70	72.870	ENSMODG00000020804	FUBP1	100	67.661	Monodelphis_domestica
ENSPMEG00000004747	fubp1	99	96.488	ENSMALG00000015173	fubp1	92	96.488	Monopterus_albus
ENSPMEG00000004747	fubp1	73	79.510	MGP_CAROLIEiJ_G0025740	Fubp1	99	76.145	Mus_caroli
ENSPMEG00000004747	fubp1	73	79.287	ENSMUSG00000028034	Fubp1	99	75.954	Mus_musculus
ENSPMEG00000004747	fubp1	73	79.333	MGP_PahariEiJ_G0027191	Fubp1	99	76.000	Mus_pahari
ENSPMEG00000004747	fubp1	73	79.510	MGP_SPRETEiJ_G0026693	Fubp1	99	76.145	Mus_spretus
ENSPMEG00000004747	fubp1	73	74.481	ENSMLUG00000014802	FUBP1	99	70.045	Myotis_lucifugus
ENSPMEG00000004747	fubp1	73	75.717	ENSNGAG00000014302	Fubp1	99	71.090	Nannospalax_galili
ENSPMEG00000004747	fubp1	96	91.468	ENSNBRG00000015099	fubp1	99	90.584	Neolamprologus_brichardi
ENSPMEG00000004747	fubp1	73	74.123	ENSNLEG00000009772	FUBP1	99	70.859	Nomascus_leucogenys
ENSPMEG00000004747	fubp1	72	65.111	ENSOPRG00000001175	FUBP1	98	62.053	Ochotona_princeps
ENSPMEG00000004747	fubp1	73	78.384	ENSODEG00000002600	-	98	72.713	Octodon_degus
ENSPMEG00000004747	fubp1	100	54.441	ENSODEG00000003657	-	100	52.070	Octodon_degus
ENSPMEG00000004747	fubp1	99	96.823	ENSONIG00000018381	fubp1	100	89.796	Oreochromis_niloticus
ENSPMEG00000004747	fubp1	63	80.928	ENSOANG00000009777	FUBP1	98	69.043	Ornithorhynchus_anatinus
ENSPMEG00000004747	fubp1	100	88.000	ENSORLG00000003540	fubp1	99	88.387	Oryzias_latipes
ENSPMEG00000004747	fubp1	99	95.318	ENSORLG00020005908	fubp1	99	88.331	Oryzias_latipes_hni
ENSPMEG00000004747	fubp1	99	95.318	ENSORLG00015008779	fubp1	99	90.762	Oryzias_latipes_hsok
ENSPMEG00000004747	fubp1	99	95.485	ENSOMEG00000021943	fubp1	99	91.883	Oryzias_melastigma
ENSPMEG00000004747	fubp1	73	74.327	ENSOGAG00000014233	FUBP1	99	69.792	Otolemur_garnettii
ENSPMEG00000004747	fubp1	73	78.808	ENSOARG00000013259	FUBP1	99	69.955	Ovis_aries
ENSPMEG00000004747	fubp1	73	78.384	ENSPPRG00000000413	FUBP1	99	72.713	Panthera_pardus
ENSPMEG00000004747	fubp1	73	78.384	ENSPTIG00000019450	FUBP1	99	72.713	Panthera_tigris_altaica
ENSPMEG00000004747	fubp1	69	79.524	ENSPSIG00000012965	FUBP1	99	72.881	Pelodiscus_sinensis
ENSPMEG00000004747	fubp1	99	84.984	ENSPMGG00000009060	fubp1	99	83.866	Periophthalmus_magnuspinnatus
ENSPMEG00000004747	fubp1	73	79.470	ENSPEMG00000021802	Fubp1	98	72.784	Peromyscus_maniculatus_bairdii
ENSPMEG00000004747	fubp1	60	59.389	ENSPMAG00000001644	-	93	59.389	Petromyzon_marinus
ENSPMEG00000004747	fubp1	99	100.000	ENSPFOG00000000238	fubp1	91	100.000	Poecilia_formosa
ENSPMEG00000004747	fubp1	99	97.822	ENSPLAG00000021170	fubp1	96	96.259	Poecilia_latipinna
ENSPMEG00000004747	fubp1	99	99.833	ENSPREG00000017911	fubp1	99	97.552	Poecilia_reticulata
ENSPMEG00000004747	fubp1	75	78.017	ENSPPYG00000001219	-	68	79.157	Pongo_abelii
ENSPMEG00000004747	fubp1	73	78.337	ENSPCAG00000012617	FUBP1	98	72.671	Procavia_capensis
ENSPMEG00000004747	fubp1	73	78.714	ENSPCOG00000024974	FUBP1	99	72.713	Propithecus_coquereli
ENSPMEG00000004747	fubp1	73	72.271	ENSPVAG00000014637	FUBP1	98	68.372	Pteropus_vampyrus
ENSPMEG00000004747	fubp1	99	96.656	ENSPNYG00000004552	fubp1	99	90.476	Pundamilia_nyererei
ENSPMEG00000004747	fubp1	99	87.417	ENSPNAG00000016207	fubp1	100	82.371	Pygocentrus_nattereri
ENSPMEG00000004747	fubp1	73	79.510	ENSRNOG00000043370	Fubp1	99	72.939	Rattus_norvegicus
ENSPMEG00000004747	fubp1	73	78.166	ENSRBIG00000042950	FUBP1	99	72.558	Rhinopithecus_bieti
ENSPMEG00000004747	fubp1	73	78.166	ENSRROG00000043534	FUBP1	99	72.558	Rhinopithecus_roxellana
ENSPMEG00000004747	fubp1	73	78.384	ENSSBOG00000027299	FUBP1	97	75.706	Saimiri_boliviensis_boliviensis
ENSPMEG00000004747	fubp1	68	78.910	ENSSHAG00000005367	FUBP1	98	75.551	Sarcophilus_harrisii
ENSPMEG00000004747	fubp1	99	85.000	ENSSFOG00015010213	fubp1	99	79.661	Scleropages_formosus
ENSPMEG00000004747	fubp1	99	91.148	ENSSMAG00000012029	fubp1	98	85.097	Scophthalmus_maximus
ENSPMEG00000004747	fubp1	99	95.567	ENSSDUG00000007383	fubp1	91	95.567	Seriola_dumerili
ENSPMEG00000004747	fubp1	99	95.567	ENSSLDG00000022863	fubp1	99	89.855	Seriola_lalandi_dorsalis
ENSPMEG00000004747	fubp1	73	87.356	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSPMEG00000004747	fubp1	99	69.677	ENSSPUG00000008389	FUBP1	100	65.547	Sphenodon_punctatus
ENSPMEG00000004747	fubp1	99	97.157	ENSSPAG00000010161	fubp1	99	92.788	Stegastes_partitus
ENSPMEG00000004747	fubp1	68	79.714	ENSTGUG00000006841	FUBP1	100	72.951	Taeniopygia_guttata
ENSPMEG00000004747	fubp1	99	92.475	ENSTRUG00000004615	fubp1	88	91.472	Takifugu_rubripes
ENSPMEG00000004747	fubp1	51	94.558	ENSTNIG00000019815	-	87	94.558	Tetraodon_nigroviridis
ENSPMEG00000004747	fubp1	76	82.738	ENSTBEG00000017333	FUBP1	62	88.690	Tupaia_belangeri
ENSPMEG00000004747	fubp1	73	78.384	ENSTTRG00000000096	FUBP1	98	72.558	Tursiops_truncatus
ENSPMEG00000004747	fubp1	73	78.384	ENSVPAG00000004709	FUBP1	99	72.558	Vicugna_pacos
ENSPMEG00000004747	fubp1	99	92.308	ENSXCOG00000019354	fubp1	99	90.256	Xiphophorus_couchianus
ENSPMEG00000004747	fubp1	100	99.667	ENSXMAG00000007168	fubp1	100	99.667	Xiphophorus_maculatus