EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000004752 (Gene tree)
Gene ID: 106932924
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 12-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 3308 bases
Position: chrKQ552540.1:99083-102390
Accession: 106932924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003592	zf-C2H2	PF00096.26	5.4e-19	1	3
ENSPMEP00000003592	zf-C2H2	PF00096.26	5.4e-19	2	3
ENSPMEP00000003592	zf-C2H2	PF00096.26	5.4e-19	3	3
ENSPMEP00000003592	zf-met	PF12874.7	1.4e-07	1	2
ENSPMEP00000003592	zf-met	PF12874.7	1.4e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000010590	-	2124	XM_015011885	ENSPMEP00000003592	274 (aa)	XP_014867371	UPI00072E3401

Gene Model

Click here to download ENSPMEG00000004752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004752's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000004752	-	54	51.429	ENSPMEG00000009030	-	73	37.500
ENSPMEG00000004752	-	99	37.500	ENSPMEG00000013952	-	93	37.500
ENSPMEG00000004752	-	99	43.299	ENSPMEG00000011175	-	93	43.299
ENSPMEG00000004752	-	95	30.827	ENSPMEG00000015550	-	76	31.203
ENSPMEG00000004752	-	96	46.479	ENSPMEG00000015273	-	96	43.023
ENSPMEG00000004752	-	68	43.902	ENSPMEG00000023302	-	53	43.902
ENSPMEG00000004752	-	50	42.045	ENSPMEG00000018732	-	94	42.045
ENSPMEG00000004752	-	99	41.250	ENSPMEG00000004749	-	87	41.250
ENSPMEG00000004752	-	99	39.655	ENSPMEG00000024117	-	99	39.655

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004752	-	98	42.045	ENSAPOG00000021966	-	99	42.045	Acanthochromis_polyacanthus
ENSPMEG00000004752	-	98	40.580	ENSAOCG00000020652	-	100	40.580	Amphiprion_ocellaris
ENSPMEG00000004752	-	99	66.090	ENSAOCG00000001971	-	100	66.090	Amphiprion_ocellaris
ENSPMEG00000004752	-	98	42.045	ENSAOCG00000022529	-	100	42.045	Amphiprion_ocellaris
ENSPMEG00000004752	-	99	66.090	ENSAPEG00000011156	-	86	66.090	Amphiprion_percula
ENSPMEG00000004752	-	60	38.372	ENSATEG00000014684	-	86	52.542	Anabas_testudineus
ENSPMEG00000004752	-	62	41.573	ENSACLG00000005795	-	84	41.573	Astatotilapia_calliptera
ENSPMEG00000004752	-	98	38.636	ENSACLG00000008374	-	99	38.636	Astatotilapia_calliptera
ENSPMEG00000004752	-	99	73.356	ENSCVAG00000000161	-	99	73.356	Cyprinodon_variegatus
ENSPMEG00000004752	-	100	69.550	ENSFHEG00000003856	-	99	69.550	Fundulus_heteroclitus
ENSPMEG00000004752	-	100	91.727	ENSGAFG00000000549	-	100	91.727	Gambusia_affinis
ENSPMEG00000004752	-	98	38.636	ENSHBUG00000017924	-	99	38.636	Haplochromis_burtoni
ENSPMEG00000004752	-	73	32.692	ENSHBUG00000013065	-	82	32.692	Haplochromis_burtoni
ENSPMEG00000004752	-	98	38.095	ENSHCOG00000020309	-	97	38.095	Hippocampus_comes
ENSPMEG00000004752	-	66	37.931	ENSKMAG00000008200	-	97	37.931	Kryptolebias_marmoratus
ENSPMEG00000004752	-	99	33.220	ENSLBEG00000008850	-	99	39.326	Labrus_bergylta
ENSPMEG00000004752	-	73	32.692	ENSMZEG00005011812	-	82	32.692	Maylandia_zebra
ENSPMEG00000004752	-	98	38.636	ENSMZEG00005011431	-	99	38.636	Maylandia_zebra
ENSPMEG00000004752	-	100	61.111	ENSMALG00000012840	-	100	61.111	Monopterus_albus
ENSPMEG00000004752	-	97	43.182	ENSMALG00000005696	-	99	43.182	Monopterus_albus
ENSPMEG00000004752	-	98	38.636	ENSNBRG00000004792	-	99	38.636	Neolamprologus_brichardi
ENSPMEG00000004752	-	98	35.227	ENSPMGG00000011591	-	99	35.227	Periophthalmus_magnuspinnatus
ENSPMEG00000004752	-	98	38.636	ENSPNYG00000016157	-	99	38.636	Pundamilia_nyererei
ENSPMEG00000004752	-	62	40.449	ENSPNYG00000011024	-	84	40.449	Pundamilia_nyererei
ENSPMEG00000004752	-	52	47.500	ENSSMAG00000013663	-	81	49.367	Scophthalmus_maximus
ENSPMEG00000004752	-	98	45.238	ENSSMAG00000006902	-	99	45.238	Scophthalmus_maximus
ENSPMEG00000004752	-	98	44.048	ENSSMAG00000006155	-	97	44.048	Scophthalmus_maximus
ENSPMEG00000004752	-	98	40.909	ENSSDUG00000022035	-	100	40.909	Seriola_dumerili
ENSPMEG00000004752	-	98	40.909	ENSSLDG00000025676	-	100	40.909	Seriola_lalandi_dorsalis
ENSPMEG00000004752	-	99	51.971	ENSTRUG00000021167	-	99	52.688	Takifugu_rubripes
ENSPMEG00000004752	-	100	91.727	ENSXMAG00000028660	-	100	91.727	Xiphophorus_maculatus