EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000004802 (Gene tree)
Gene ID: 106905282
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 13094 bases
Position: chrKQ553087.1:70734-83827
Accession: 106905282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003660	RRM_1	PF00076.22	4.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000010513	-	2585	XM_014969990	ENSPMEP00000003660	306 (aa)	XP_014825476	UPI00072EED4E

Gene Model

Click here to download ENSPMEG00000004802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000004802	-	82	77.953	ENSPMEG00000016524	-	87	76.408
ENSPMEG00000004802	-	69	51.770	ENSPMEG00000013624	-	59	54.018
ENSPMEG00000004802	-	70	57.391	ENSPMEG00000023847	ralyl	76	58.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004802	-	73	54.425	ENSG00000184672	RALYL	91	79.221	Homo_sapiens
ENSPMEG00000004802	-	93	86.972	ENSAPOG00000006963	hnrnpc	92	88.028	Acanthochromis_polyacanthus
ENSPMEG00000004802	-	89	90.146	ENSACIG00000000270	-	99	87.458	Amphilophus_citrinellus
ENSPMEG00000004802	-	96	71.429	ENSACIG00000016568	-	90	78.571	Amphilophus_citrinellus
ENSPMEG00000004802	-	82	76.772	ENSAOCG00000021616	-	87	76.761	Amphiprion_ocellaris
ENSPMEG00000004802	-	93	86.620	ENSAOCG00000003896	-	92	87.676	Amphiprion_ocellaris
ENSPMEG00000004802	-	83	77.519	ENSAPEG00000019962	-	88	77.256	Amphiprion_percula
ENSPMEG00000004802	-	93	86.620	ENSAPEG00000001489	-	92	87.676	Amphiprion_percula
ENSPMEG00000004802	-	100	85.761	ENSATEG00000011734	-	100	84.466	Anabas_testudineus
ENSPMEG00000004802	-	86	77.903	ENSATEG00000018006	-	94	73.208	Anabas_testudineus
ENSPMEG00000004802	-	73	49.791	ENSAPLG00000015574	RALYL	75	55.310	Anas_platyrhynchos
ENSPMEG00000004802	-	73	50.209	ENSACAG00000028464	RALYL	74	54.425	Anolis_carolinensis
ENSPMEG00000004802	-	73	53.982	ENSANAG00000023383	RALYL	73	57.746	Aotus_nancymaae
ENSPMEG00000004802	-	100	86.319	ENSACLG00000013636	-	95	87.676	Astatotilapia_calliptera
ENSPMEG00000004802	-	100	86.645	ENSACLG00000000995	-	100	85.993	Astatotilapia_calliptera
ENSPMEG00000004802	-	86	75.655	ENSACLG00000005707	-	92	78.755	Astatotilapia_calliptera
ENSPMEG00000004802	-	68	72.986	ENSAMXG00000042946	hnrnpc	95	72.872	Astyanax_mexicanus
ENSPMEG00000004802	-	85	76.154	ENSAMXG00000034915	zgc:55733	91	74.717	Astyanax_mexicanus
ENSPMEG00000004802	-	73	54.425	ENSCJAG00000000402	RALYL	73	58.216	Callithrix_jacchus
ENSPMEG00000004802	-	87	46.454	ENSCPOG00000012314	RALYL	74	54.911	Cavia_porcellus
ENSPMEG00000004802	-	73	54.425	ENSCCAG00000025003	RALYL	75	79.221	Cebus_capucinus
ENSPMEG00000004802	-	73	54.425	ENSCATG00000042145	RALYL	73	58.216	Cercocebus_atys
ENSPMEG00000004802	-	73	50.840	ENSCLAG00000005228	RALYL	74	54.911	Chinchilla_lanigera
ENSPMEG00000004802	-	69	50.661	ENSCHOG00000013228	RALYL	74	52.212	Choloepus_hoffmanni
ENSPMEG00000004802	-	73	54.425	ENSCANG00000039144	RALYL	73	58.216	Colobus_angolensis_palliatus
ENSPMEG00000004802	-	73	49.791	ENSCGRG00001009241	Ralyl	74	55.310	Cricetulus_griseus_chok1gshd
ENSPMEG00000004802	-	71	79.817	ENSCSEG00000019769	-	70	80.769	Cynoglossus_semilaevis
ENSPMEG00000004802	-	78	76.763	ENSCSEG00000021349	-	84	73.260	Cynoglossus_semilaevis
ENSPMEG00000004802	-	82	80.859	ENSCVAG00000016981	-	87	75.347	Cyprinodon_variegatus
ENSPMEG00000004802	-	96	77.288	ENSCVAG00000002797	-	98	76.976	Cyprinodon_variegatus
ENSPMEG00000004802	-	79	74.897	ENSDARG00000053810	hnrnpc	86	75.090	Danio_rerio
ENSPMEG00000004802	-	91	75.627	ENSDARG00000103845	zgc:55733	94	77.099	Danio_rerio
ENSPMEG00000004802	-	73	50.209	ENSDORG00000003721	Ralyl	74	55.752	Dipodomys_ordii
ENSPMEG00000004802	-	53	55.429	ENSETEG00000014028	RALYL	86	58.382	Echinops_telfairi
ENSPMEG00000004802	-	77	45.417	ENSEBUG00000006049	RALYL	73	46.698	Eptatretus_burgeri
ENSPMEG00000004802	-	70	49.130	ENSEBUG00000012363	hnrnpc	64	48.869	Eptatretus_burgeri
ENSPMEG00000004802	-	73	50.628	ENSEEUG00000007202	RALYL	76	54.222	Erinaceus_europaeus
ENSPMEG00000004802	-	81	79.167	ENSELUG00000007714	-	96	76.761	Esox_lucius
ENSPMEG00000004802	-	83	77.255	ENSELUG00000004132	-	93	75.812	Esox_lucius
ENSPMEG00000004802	-	69	57.604	ENSFALG00000008647	RALYL	96	59.259	Ficedula_albicollis
ENSPMEG00000004802	-	93	90.493	ENSFHEG00000003605	-	93	90.493	Fundulus_heteroclitus
ENSPMEG00000004802	-	83	75.458	ENSFHEG00000007278	-	90	72.093	Fundulus_heteroclitus
ENSPMEG00000004802	-	73	53.509	ENSGALG00000036938	RALYL	74	55.310	Gallus_gallus
ENSPMEG00000004802	-	95	72.635	ENSGAFG00000020992	-	89	77.338	Gambusia_affinis
ENSPMEG00000004802	-	100	95.098	ENSGAFG00000020486	-	100	95.098	Gambusia_affinis
ENSPMEG00000004802	-	87	76.753	ENSGACG00000017772	-	99	76.952	Gasterosteus_aculeatus
ENSPMEG00000004802	-	71	69.196	ENSGACG00000018932	-	83	71.770	Gasterosteus_aculeatus
ENSPMEG00000004802	-	73	54.425	ENSGGOG00000000841	RALYL	73	58.216	Gorilla_gorilla
ENSPMEG00000004802	-	98	70.662	ENSHBUG00000010527	-	87	78.369	Haplochromis_burtoni
ENSPMEG00000004802	-	100	86.971	ENSHBUG00000018342	-	100	86.319	Haplochromis_burtoni
ENSPMEG00000004802	-	73	50.420	ENSHGLG00000004866	RALYL	74	54.464	Heterocephalus_glaber_female
ENSPMEG00000004802	-	73	50.420	ENSHGLG00100017480	RALYL	74	54.464	Heterocephalus_glaber_male
ENSPMEG00000004802	-	84	73.897	ENSHCOG00000012333	hnrnpc	95	72.203	Hippocampus_comes
ENSPMEG00000004802	-	87	75.940	ENSIPUG00000011271	hnrnpc	95	77.626	Ictalurus_punctatus
ENSPMEG00000004802	-	85	75.000	ENSIPUG00000008666	zgc:55733	91	80.288	Ictalurus_punctatus
ENSPMEG00000004802	-	73	49.791	ENSSTOG00000012583	RALYL	76	55.310	Ictidomys_tridecemlineatus
ENSPMEG00000004802	-	82	77.165	ENSKMAG00000018265	-	86	76.512	Kryptolebias_marmoratus
ENSPMEG00000004802	-	92	89.007	ENSKMAG00000011170	-	91	89.437	Kryptolebias_marmoratus
ENSPMEG00000004802	-	89	76.950	ENSLBEG00000024418	-	91	76.241	Labrus_bergylta
ENSPMEG00000004802	-	88	81.481	ENSLBEG00000006979	-	91	81.481	Labrus_bergylta
ENSPMEG00000004802	-	85	76.806	ENSLBEG00000006193	-	86	76.344	Labrus_bergylta
ENSPMEG00000004802	-	85	67.897	ENSLOCG00000002560	hnrnpc	93	70.909	Lepisosteus_oculatus
ENSPMEG00000004802	-	73	54.425	ENSMNEG00000033288	RALYL	73	58.216	Macaca_nemestrina
ENSPMEG00000004802	-	73	54.425	ENSMLEG00000038284	RALYL	73	58.216	Mandrillus_leucophaeus
ENSPMEG00000004802	-	86	76.779	ENSMAMG00000008033	-	94	76.812	Mastacembelus_armatus
ENSPMEG00000004802	-	93	84.912	ENSMAMG00000012236	-	92	86.667	Mastacembelus_armatus
ENSPMEG00000004802	-	100	86.645	ENSMZEG00005020460	-	100	85.993	Maylandia_zebra
ENSPMEG00000004802	-	98	70.347	ENSMZEG00005024249	-	87	78.014	Maylandia_zebra
ENSPMEG00000004802	-	73	49.791	ENSMAUG00000015149	Ralyl	74	55.310	Mesocricetus_auratus
ENSPMEG00000004802	-	73	54.185	ENSMICG00000005558	RALYL	78	79.221	Microcebus_murinus
ENSPMEG00000004802	-	73	49.791	ENSMOCG00000017371	Ralyl	74	55.310	Microtus_ochrogaster
ENSPMEG00000004802	-	83	85.490	ENSMMOG00000021465	-	93	84.962	Mola_mola
ENSPMEG00000004802	-	81	78.800	ENSMMOG00000019520	-	88	78.947	Mola_mola
ENSPMEG00000004802	-	86	80.682	ENSMALG00000014623	-	86	78.339	Monopterus_albus
ENSPMEG00000004802	-	83	77.255	ENSMALG00000007520	-	98	77.663	Monopterus_albus
ENSPMEG00000004802	-	73	49.372	ENSMUSG00000039717	Ralyl	91	77.922	Mus_musculus
ENSPMEG00000004802	-	73	51.046	ENSMPUG00000010724	RALYL	74	54.867	Mustela_putorius_furo
ENSPMEG00000004802	-	73	49.791	ENSNGAG00000013375	Ralyl	74	55.310	Nannospalax_galili
ENSPMEG00000004802	-	98	67.925	ENSNBRG00000015676	-	87	78.369	Neolamprologus_brichardi
ENSPMEG00000004802	-	95	85.570	ENSNBRG00000004912	-	97	85.374	Neolamprologus_brichardi
ENSPMEG00000004802	-	73	54.425	ENSNLEG00000002702	RALYL	70	58.216	Nomascus_leucogenys
ENSPMEG00000004802	-	58	48.454	ENSOPRG00000013650	-	98	48.454	Ochotona_princeps
ENSPMEG00000004802	-	73	51.261	ENSODEG00000001012	RALYL	74	54.911	Octodon_degus
ENSPMEG00000004802	-	98	70.347	ENSONIG00000018350	-	87	78.014	Oreochromis_niloticus
ENSPMEG00000004802	-	92	84.321	ENSONIG00000007859	-	99	85.714	Oreochromis_niloticus
ENSPMEG00000004802	-	100	76.623	ENSORLG00000009999	-	100	76.299	Oryzias_latipes
ENSPMEG00000004802	-	82	76.718	ENSORLG00000003144	-	95	71.562	Oryzias_latipes
ENSPMEG00000004802	-	100	76.299	ENSORLG00020018228	hnrnpc	100	75.974	Oryzias_latipes_hni
ENSPMEG00000004802	-	82	76.718	ENSORLG00015009460	-	85	77.003	Oryzias_latipes_hsok
ENSPMEG00000004802	-	100	76.623	ENSORLG00015019755	-	100	76.299	Oryzias_latipes_hsok
ENSPMEG00000004802	-	82	79.608	ENSOMEG00000022665	-	86	79.286	Oryzias_melastigma
ENSPMEG00000004802	-	87	77.239	ENSOMEG00000020488	-	95	78.157	Oryzias_melastigma
ENSPMEG00000004802	-	73	54.425	ENSPPAG00000038705	RALYL	73	58.216	Pan_paniscus
ENSPMEG00000004802	-	73	53.509	ENSPPRG00000018612	RALYL	73	58.796	Panthera_pardus
ENSPMEG00000004802	-	73	53.509	ENSPTIG00000020331	RALYL	73	58.796	Panthera_tigris_altaica
ENSPMEG00000004802	-	73	54.425	ENSPTRG00000020381	RALYL	73	58.216	Pan_troglodytes
ENSPMEG00000004802	-	73	54.425	ENSPANG00000029305	RALYL	73	58.216	Papio_anubis
ENSPMEG00000004802	-	92	73.356	ENSPKIG00000022837	-	86	79.422	Paramormyrops_kingsleyae
ENSPMEG00000004802	-	91	74.216	ENSPKIG00000008592	-	87	77.419	Paramormyrops_kingsleyae
ENSPMEG00000004802	-	73	49.791	ENSPSIG00000011135	RALYL	74	55.310	Pelodiscus_sinensis
ENSPMEG00000004802	-	71	85.714	ENSPMGG00000013144	-	95	73.485	Periophthalmus_magnuspinnatus
ENSPMEG00000004802	-	94	64.483	ENSPMGG00000017774	-	86	67.961	Periophthalmus_magnuspinnatus
ENSPMEG00000004802	-	73	49.791	ENSPEMG00000016447	Ralyl	74	55.310	Peromyscus_maniculatus_bairdii
ENSPMEG00000004802	-	69	53.509	ENSPMAG00000002407	RALYL	96	53.540	Petromyzon_marinus
ENSPMEG00000004802	-	95	70.455	ENSPFOG00000002643	-	87	77.113	Poecilia_formosa
ENSPMEG00000004802	-	100	98.046	ENSPFOG00000001583	-	100	98.046	Poecilia_formosa
ENSPMEG00000004802	-	100	97.712	ENSPLAG00000015305	-	100	97.712	Poecilia_latipinna
ENSPMEG00000004802	-	82	78.346	ENSPLAG00000000061	-	86	77.113	Poecilia_latipinna
ENSPMEG00000004802	-	82	77.559	ENSPREG00000001852	-	92	76.619	Poecilia_reticulata
ENSPMEG00000004802	-	100	95.098	ENSPREG00000007928	-	100	95.098	Poecilia_reticulata
ENSPMEG00000004802	-	73	46.847	ENSPPYG00000018710	-	67	48.077	Pongo_abelii
ENSPMEG00000004802	-	73	50.840	ENSPVAG00000010821	RALYL	78	52.966	Pteropus_vampyrus
ENSPMEG00000004802	-	86	76.030	ENSPNYG00000003747	-	91	78.545	Pundamilia_nyererei
ENSPMEG00000004802	-	91	87.726	ENSPNYG00000020293	-	92	88.104	Pundamilia_nyererei
ENSPMEG00000004802	-	85	72.388	ENSPNAG00000019200	zgc:55733	87	72.826	Pygocentrus_nattereri
ENSPMEG00000004802	-	79	75.410	ENSPNAG00000015686	hnrnpc	88	76.426	Pygocentrus_nattereri
ENSPMEG00000004802	-	73	54.425	ENSRROG00000023925	RALYL	80	77.215	Rhinopithecus_roxellana
ENSPMEG00000004802	-	93	66.667	ENSSFOG00015012015	-	95	71.591	Scleropages_formosus
ENSPMEG00000004802	-	83	75.191	ENSSFOG00015012924	-	78	94.805	Scleropages_formosus
ENSPMEG00000004802	-	93	83.217	ENSSMAG00000013592	-	91	83.916	Scophthalmus_maximus
ENSPMEG00000004802	-	84	74.809	ENSSMAG00000011147	-	96	72.222	Scophthalmus_maximus
ENSPMEG00000004802	-	93	86.972	ENSSDUG00000001723	-	100	84.416	Seriola_dumerili
ENSPMEG00000004802	-	98	73.163	ENSSDUG00000006730	-	87	78.417	Seriola_dumerili
ENSPMEG00000004802	-	91	86.738	ENSSLDG00000007454	-	92	86.879	Seriola_lalandi_dorsalis
ENSPMEG00000004802	-	86	79.245	ENSSLDG00000007474	-	92	78.229	Seriola_lalandi_dorsalis
ENSPMEG00000004802	-	92	87.189	ENSSPAG00000023204	-	92	88.028	Stegastes_partitus
ENSPMEG00000004802	-	98	71.429	ENSSPAG00000013996	-	87	76.868	Stegastes_partitus
ENSPMEG00000004802	-	71	50.855	ENSTGUG00000011689	RALYL	76	55.310	Taeniopygia_guttata
ENSPMEG00000004802	-	86	80.534	ENSTRUG00000020158	-	89	82.222	Takifugu_rubripes
ENSPMEG00000004802	-	83	76.245	ENSTNIG00000007427	-	88	77.941	Tetraodon_nigroviridis
ENSPMEG00000004802	-	83	74.219	ENSTNIG00000000334	-	98	74.532	Tetraodon_nigroviridis
ENSPMEG00000004802	-	70	46.581	ENSTBEG00000005551	RALYL	86	47.982	Tupaia_belangeri
ENSPMEG00000004802	-	73	49.573	ENSTTRG00000015762	RALYL	74	54.751	Tursiops_truncatus
ENSPMEG00000004802	-	73	48.899	ENSVPAG00000008501	RALYL	74	54.419	Vicugna_pacos
ENSPMEG00000004802	-	51	85.366	ENSXCOG00000019434	-	76	83.425	Xiphophorus_couchianus
ENSPMEG00000004802	-	88	88.148	ENSXCOG00000006552	-	86	89.394	Xiphophorus_couchianus
ENSPMEG00000004802	-	100	95.098	ENSXMAG00000009333	-	100	95.098	Xiphophorus_maculatus
ENSPMEG00000004802	-	82	77.559	ENSXMAG00000022849	-	89	76.619	Xiphophorus_maculatus