EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000004807 (Gene tree)
Gene ID: 106916455
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 6364 bases
Position: chrKQ551187.1:1837-8200
Accession: 106916455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000023272	PRP38	PF03371.15	2.1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000010558	-	1428	XM_014984762	ENSPMEP00000023272	475 (aa)	XP_014840248	-

Gene Model

Click here to download ENSPMEG00000004807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004807	-	97	84.516	ENSATEG00000014482	-	100	84.301	Anabas_testudineus
ENSPMEG00000004807	-	59	86.525	ENSAMXG00000039494	-	50	85.223	Astyanax_mexicanus
ENSPMEG00000004807	-	58	84.783	ENSBTAG00000047874	PRPF38B	85	61.667	Bos_taurus
ENSPMEG00000004807	-	56	46.468	WBGene00022434	Y108G3AL.2	61	53.266	Caenorhabditis_elegans
ENSPMEG00000004807	-	95	57.339	ENSCAFG00020010992	-	91	57.339	Canis_lupus_dingo
ENSPMEG00000004807	-	58	84.783	ENSCHIG00000024357	-	85	61.667	Capra_hircus
ENSPMEG00000004807	-	57	85.145	ENSCPOG00000039545	-	83	62.924	Cavia_porcellus
ENSPMEG00000004807	-	57	84.727	ENSCLAG00000005801	-	83	62.105	Chinchilla_lanigera
ENSPMEG00000004807	-	50	73.950	ENSCHOG00000008972	-	98	59.773	Choloepus_hoffmanni
ENSPMEG00000004807	-	97	79.399	ENSCSEG00000015030	-	100	78.541	Cynoglossus_semilaevis
ENSPMEG00000004807	-	57	82.909	ENSETEG00000014690	-	85	68.814	Echinops_telfairi
ENSPMEG00000004807	-	99	63.138	ENSELUG00000010390	-	98	69.450	Esox_lucius
ENSPMEG00000004807	-	97	76.261	ENSGMOG00000012080	-	99	76.050	Gadus_morhua
ENSPMEG00000004807	-	96	60.229	ENSGALG00000001972	-	84	62.500	Gallus_gallus
ENSPMEG00000004807	-	97	98.488	ENSGAFG00000008943	-	100	98.488	Gambusia_affinis
ENSPMEG00000004807	-	96	62.846	ENSGAGG00000001563	-	83	64.119	Gopherus_agassizii
ENSPMEG00000004807	-	57	85.766	ENSHGLG00000016583	PRPF38B	91	61.386	Heterocephalus_glaber_female
ENSPMEG00000004807	-	57	85.766	ENSHGLG00100015525	-	91	61.188	Heterocephalus_glaber_male
ENSPMEG00000004807	-	97	78.925	ENSHCOG00000001071	-	100	79.095	Hippocampus_comes
ENSPMEG00000004807	-	97	82.030	ENSKMAG00000005540	-	100	81.818	Kryptolebias_marmoratus
ENSPMEG00000004807	-	99	58.550	ENSLACG00000015511	-	76	66.262	Latimeria_chalumnae
ENSPMEG00000004807	-	57	85.091	ENSMOCG00000020285	-	87	63.866	Microtus_ochrogaster
ENSPMEG00000004807	-	97	82.692	ENSMMOG00000011639	-	100	79.614	Mola_mola
ENSPMEG00000004807	-	64	78.641	ENSMODG00000002350	-	87	84.672	Monodelphis_domestica
ENSPMEG00000004807	-	97	86.966	ENSMALG00000019479	-	100	83.871	Monopterus_albus
ENSPMEG00000004807	-	97	87.742	ENSONIG00000010129	-	100	87.097	Oreochromis_niloticus
ENSPMEG00000004807	-	84	64.762	ENSOANG00000007343	-	92	61.853	Ornithorhynchus_anatinus
ENSPMEG00000004807	-	97	81.897	ENSORLG00000015621	-	95	98.171	Oryzias_latipes
ENSPMEG00000004807	-	97	82.112	ENSORLG00020016276	-	94	98.171	Oryzias_latipes_hni
ENSPMEG00000004807	-	97	81.897	ENSORLG00015016270	-	100	83.190	Oryzias_latipes_hsok
ENSPMEG00000004807	-	97	83.190	ENSOMEG00000022050	-	97	97.590	Oryzias_melastigma
ENSPMEG00000004807	-	57	85.766	ENSOGAG00000027048	-	80	64.474	Otolemur_garnettii
ENSPMEG00000004807	-	55	86.742	ENSOARG00000018899	-	82	63.020	Ovis_aries
ENSPMEG00000004807	-	95	65.923	ENSPKIG00000004815	-	97	64.257	Paramormyrops_kingsleyae
ENSPMEG00000004807	-	98	66.802	ENSPKIG00000017291	-	85	65.208	Paramormyrops_kingsleyae
ENSPMEG00000004807	-	97	99.784	ENSPFOG00000004025	-	100	99.784	Poecilia_formosa
ENSPMEG00000004807	-	97	99.568	ENSPLAG00000019842	-	100	99.568	Poecilia_latipinna
ENSPMEG00000004807	-	97	98.056	ENSPREG00000015599	-	100	98.056	Poecilia_reticulata
ENSPMEG00000004807	-	59	86.738	ENSPNAG00000017484	-	95	69.136	Pygocentrus_nattereri
ENSPMEG00000004807	-	57	85.401	ENSRNOG00000020438	Prpf38b	88	62.733	Rattus_norvegicus
ENSPMEG00000004807	-	92	68.539	ENSSFOG00015011251	-	85	89.024	Scleropages_formosus
ENSPMEG00000004807	-	97	84.615	ENSSLDG00000023487	-	100	84.188	Seriola_lalandi_dorsalis
ENSPMEG00000004807	-	96	63.636	ENSSPUG00000017742	-	84	62.552	Sphenodon_punctatus
ENSPMEG00000004807	-	96	79.004	ENSTRUG00000011765	-	99	78.139	Takifugu_rubripes
ENSPMEG00000004807	-	95	80.328	ENSTNIG00000015299	-	99	71.274	Tetraodon_nigroviridis
ENSPMEG00000004807	-	56	76.952	ENSTBEG00000007504	-	88	57.143	Tupaia_belangeri
ENSPMEG00000004807	-	57	85.766	ENSTTRG00000006479	-	85	61.031	Tursiops_truncatus
ENSPMEG00000004807	-	63	61.873	ENSVPAG00000005541	-	69	60.743	Vicugna_pacos
ENSPMEG00000004807	-	92	59.792	ENSXETG00000005260	prpf38b	78	67.742	Xenopus_tropicalis
ENSPMEG00000004807	-	97	98.272	ENSXCOG00000008329	-	100	98.272	Xiphophorus_couchianus
ENSPMEG00000004807	-	97	98.272	ENSXMAG00000023831	-	100	98.272	Xiphophorus_maculatus