EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000004894 (Gene tree)
Gene ID: 106917147
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 9105 bases
Position: chrKQ551222.1:81065-90169
Accession: 106917147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000023346	RRM_5	PF13893.6	2e-10	1	2
ENSPMEP00000023346	RRM_5	PF13893.6	2e-10	2	2
ENSPMEP00000003727	RRM_5	PF13893.6	2.3e-10	1	2
ENSPMEP00000003727	RRM_5	PF13893.6	2.3e-10	2	2
ENSPMEP00000023346	RRM_1	PF00076.22	1.5e-32	1	2
ENSPMEP00000023346	RRM_1	PF00076.22	1.5e-32	2	2
ENSPMEP00000003727	RRM_1	PF00076.22	1.8e-32	1	2
ENSPMEP00000003727	RRM_1	PF00076.22	1.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000010402	-	2969	XM_014985901	ENSPMEP00000023346	521 (aa)	XP_014841387	UPI000514AE77
ENSPMET00000010390	-	5983	XM_014985898	ENSPMEP00000003727	548 (aa)	XP_014841384	UPI0004447469

Gene Model

Click here to download ENSPMEG00000004894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000004894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000004894	-	71	63.636	ENSPMEG00000012911	rbm14b	65	63.869

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000004894	-	72	62.230	ENSAPOG00000021712	rbm14b	68	62.455	Acanthochromis_polyacanthus
ENSPMEG00000004894	-	99	86.799	ENSAPOG00000003380	-	99	86.076	Acanthochromis_polyacanthus
ENSPMEG00000004894	-	66	62.816	ENSACIG00000000381	rbm14b	81	47.379	Amphilophus_citrinellus
ENSPMEG00000004894	-	99	86.000	ENSACIG00000021173	-	99	85.091	Amphilophus_citrinellus
ENSPMEG00000004894	-	72	62.816	ENSAOCG00000008941	rbm14b	82	57.364	Amphiprion_ocellaris
ENSPMEG00000004894	-	100	85.895	ENSAOCG00000001659	-	100	85.714	Amphiprion_ocellaris
ENSPMEG00000004894	-	72	62.816	ENSAPEG00000003161	rbm14b	82	56.522	Amphiprion_percula
ENSPMEG00000004894	-	99	86.909	ENSAPEG00000016988	-	99	86.182	Amphiprion_percula
ENSPMEG00000004894	-	69	60.428	ENSATEG00000003034	rbm14b	78	58.942	Anabas_testudineus
ENSPMEG00000004894	-	100	84.630	ENSATEG00000009700	-	97	83.302	Anabas_testudineus
ENSPMEG00000004894	-	66	62.816	ENSACLG00000014355	rbm14b	63	63.043	Astatotilapia_calliptera
ENSPMEG00000004894	-	100	86.486	ENSACLG00000009112	-	97	86.643	Astatotilapia_calliptera
ENSPMEG00000004894	-	73	59.850	ENSAMXG00000007233	rbm14a	82	59.850	Astyanax_mexicanus
ENSPMEG00000004894	-	69	62.637	ENSAMXG00000031225	rbm14b	67	62.271	Astyanax_mexicanus
ENSPMEG00000004894	-	74	52.477	ENSCSEG00000000357	rbm14b	81	53.153	Cynoglossus_semilaevis
ENSPMEG00000004894	-	100	82.554	ENSCSEG00000019690	-	100	82.374	Cynoglossus_semilaevis
ENSPMEG00000004894	-	72	63.177	ENSCVAG00000013776	rbm14b	66	63.406	Cyprinodon_variegatus
ENSPMEG00000004894	-	100	93.103	ENSCVAG00000014858	-	100	92.196	Cyprinodon_variegatus
ENSPMEG00000004894	-	69	62.409	ENSDARG00000103834	rbm14b	64	62.774	Danio_rerio
ENSPMEG00000004894	-	73	59.391	ENSDARG00000012723	rbm14a	80	59.288	Danio_rerio
ENSPMEG00000004894	-	69	65.799	ENSELUG00000004690	rbm14b	78	64.158	Esox_lucius
ENSPMEG00000004894	-	85	56.313	ENSELUG00000023633	rbm14a	81	57.143	Esox_lucius
ENSPMEG00000004894	-	74	48.649	ENSFHEG00000021265	rbm14b	83	49.064	Fundulus_heteroclitus
ENSPMEG00000004894	-	100	91.651	ENSFHEG00000020913	-	100	91.651	Fundulus_heteroclitus
ENSPMEG00000004894	-	73	78.215	ENSGMOG00000010840	-	78	77.690	Gadus_morhua
ENSPMEG00000004894	-	100	98.848	ENSGAFG00000004455	-	100	98.848	Gambusia_affinis
ENSPMEG00000004894	-	71	63.273	ENSGAFG00000001924	rbm14b	65	63.504	Gambusia_affinis
ENSPMEG00000004894	-	93	84.881	ENSGACG00000020440	-	100	84.017	Gasterosteus_aculeatus
ENSPMEG00000004894	-	66	62.816	ENSHBUG00000016754	rbm14b	63	63.043	Haplochromis_burtoni
ENSPMEG00000004894	-	100	86.486	ENSHBUG00000003665	-	97	86.643	Haplochromis_burtoni
ENSPMEG00000004894	-	95	74.535	ENSHCOG00000004071	-	76	82.206	Hippocampus_comes
ENSPMEG00000004894	-	79	53.396	ENSHCOG00000012571	rbm14b	99	66.667	Hippocampus_comes
ENSPMEG00000004894	-	67	62.271	ENSIPUG00000009089	rbm14b	86	48.523	Ictalurus_punctatus
ENSPMEG00000004894	-	74	55.742	ENSIPUG00000021256	rbm14a	83	55.635	Ictalurus_punctatus
ENSPMEG00000004894	-	99	85.577	ENSKMAG00000008514	-	99	84.586	Kryptolebias_marmoratus
ENSPMEG00000004894	-	71	63.273	ENSKMAG00000020444	rbm14b	65	63.504	Kryptolebias_marmoratus
ENSPMEG00000004894	-	100	83.243	ENSLBEG00000001217	-	100	83.213	Labrus_bergylta
ENSPMEG00000004894	-	51	63.273	ENSLBEG00000027934	rbm14b	60	63.043	Labrus_bergylta
ENSPMEG00000004894	-	70	63.100	ENSMAMG00000014394	rbm14b	78	48.643	Mastacembelus_armatus
ENSPMEG00000004894	-	100	82.523	ENSMAMG00000021313	-	100	82.342	Mastacembelus_armatus
ENSPMEG00000004894	-	100	86.486	ENSMZEG00005001201	-	100	86.643	Maylandia_zebra
ENSPMEG00000004894	-	66	62.816	ENSMZEG00005020834	rbm14b	64	63.043	Maylandia_zebra
ENSPMEG00000004894	-	100	81.569	ENSMMOG00000014501	-	99	81.387	Mola_mola
ENSPMEG00000004894	-	66	58.182	ENSMMOG00000012912	rbm14b	68	57.971	Mola_mola
ENSPMEG00000004894	-	69	57.937	ENSMALG00000015445	rbm14b	83	58.225	Monopterus_albus
ENSPMEG00000004894	-	99	86.076	ENSNBRG00000004960	-	99	85.507	Neolamprologus_brichardi
ENSPMEG00000004894	-	66	62.816	ENSNBRG00000003378	rbm14b	64	63.043	Neolamprologus_brichardi
ENSPMEG00000004894	-	69	60.428	ENSONIG00000013035	rbm14b	82	58.942	Oreochromis_niloticus
ENSPMEG00000004894	-	94	84.567	ENSONIG00000008557	-	95	83.898	Oreochromis_niloticus
ENSPMEG00000004894	-	100	84.574	ENSORLG00000001900	-	100	83.588	Oryzias_latipes
ENSPMEG00000004894	-	73	47.669	ENSORLG00000008051	rbm14b	82	47.789	Oryzias_latipes
ENSPMEG00000004894	-	73	47.346	ENSORLG00020005551	rbm14b	80	47.468	Oryzias_latipes_hni
ENSPMEG00000004894	-	100	84.574	ENSORLG00020019144	-	100	83.588	Oryzias_latipes_hni
ENSPMEG00000004894	-	73	47.458	ENSORLG00015022683	rbm14b	82	47.579	Oryzias_latipes_hsok
ENSPMEG00000004894	-	100	84.574	ENSORLG00015000082	-	100	84.029	Oryzias_latipes_hsok
ENSPMEG00000004894	-	80	86.787	ENSOMEG00000006508	-	96	92.667	Oryzias_melastigma
ENSPMEG00000004894	-	70	63.273	ENSOMEG00000000910	rbm14b	78	57.908	Oryzias_melastigma
ENSPMEG00000004894	-	73	50.327	ENSPKIG00000009078	rbm14b	85	49.892	Paramormyrops_kingsleyae
ENSPMEG00000004894	-	67	62.590	ENSPMGG00000013064	rbm14b	66	62.590	Periophthalmus_magnuspinnatus
ENSPMEG00000004894	-	80	78.860	ENSPMGG00000018869	-	93	87.162	Periophthalmus_magnuspinnatus
ENSPMEG00000004894	-	100	100.000	ENSPFOG00000004843	-	100	100.000	Poecilia_formosa
ENSPMEG00000004894	-	74	47.925	ENSPFOG00000003614	rbm14b	83	48.340	Poecilia_formosa
ENSPMEG00000004894	-	71	63.273	ENSPLAG00000001395	rbm14b	83	47.718	Poecilia_latipinna
ENSPMEG00000004894	-	100	100.000	ENSPLAG00000017359	-	100	100.000	Poecilia_latipinna
ENSPMEG00000004894	-	71	63.636	ENSPREG00000003013	rbm14b	66	63.869	Poecilia_reticulata
ENSPMEG00000004894	-	100	99.424	ENSPREG00000007274	-	100	99.424	Poecilia_reticulata
ENSPMEG00000004894	-	66	62.816	ENSPNYG00000023605	rbm14b	64	63.043	Pundamilia_nyererei
ENSPMEG00000004894	-	100	86.486	ENSPNYG00000015906	-	100	86.643	Pundamilia_nyererei
ENSPMEG00000004894	-	73	57.554	ENSPNAG00000012473	rbm14a	84	57.794	Pygocentrus_nattereri
ENSPMEG00000004894	-	69	62.637	ENSPNAG00000001977	rbm14b	83	48.632	Pygocentrus_nattereri
ENSPMEG00000004894	-	77	50.830	ENSSFOG00015023796	rbm14b	88	50.622	Scleropages_formosus
ENSPMEG00000004894	-	100	85.145	ENSSMAG00000002055	-	100	84.601	Scophthalmus_maximus
ENSPMEG00000004894	-	71	63.899	ENSSMAG00000004522	rbm14b	79	64.130	Scophthalmus_maximus
ENSPMEG00000004894	-	72	62.816	ENSSDUG00000007975	rbm14b	65	63.043	Seriola_dumerili
ENSPMEG00000004894	-	100	85.099	ENSSDUG00000020756	-	100	85.817	Seriola_dumerili
ENSPMEG00000004894	-	72	62.816	ENSSLDG00000006472	rbm14b	65	63.043	Seriola_lalandi_dorsalis
ENSPMEG00000004894	-	100	84.643	ENSSLDG00000006311	-	100	85.357	Seriola_lalandi_dorsalis
ENSPMEG00000004894	-	99	86.807	ENSSPAG00000010825	-	99	86.545	Stegastes_partitus
ENSPMEG00000004894	-	72	62.816	ENSSPAG00000004231	rbm14b	64	63.043	Stegastes_partitus
ENSPMEG00000004894	-	71	62.319	ENSTRUG00000005716	rbm14b	65	62.319	Takifugu_rubripes
ENSPMEG00000004894	-	100	78.394	ENSTRUG00000009504	-	93	77.438	Takifugu_rubripes
ENSPMEG00000004894	-	69	54.255	ENSTNIG00000006844	rbm14b	79	55.250	Tetraodon_nigroviridis
ENSPMEG00000004894	-	88	76.957	ENSTNIG00000000058	-	93	83.594	Tetraodon_nigroviridis
ENSPMEG00000004894	-	99	95.152	ENSXCOG00000006825	-	99	95.152	Xiphophorus_couchianus
ENSPMEG00000004894	-	100	99.270	ENSXMAG00000000338	-	100	99.270	Xiphophorus_maculatus
ENSPMEG00000004894	-	71	63.273	ENSXMAG00000008390	rbm14b	65	63.504	Xiphophorus_maculatus