EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000005094 (Gene tree)
Gene ID: 106908220
Gene Symbol: csde1
Alias: -
Full Name: cold shock domain containing E1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 26600 bases
Position: chrKQ553725.1:7033-33632
Accession: 106908220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003869	CSD	PF00313.22	1.5e-60	1	4
ENSPMEP00000003869	CSD	PF00313.22	1.5e-60	2	4
ENSPMEP00000003869	CSD	PF00313.22	1.5e-60	3	4
ENSPMEP00000003869	CSD	PF00313.22	1.5e-60	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000010153	-	1986	XM_014974251	ENSPMEP00000003869	661 (aa)	XP_014829737	-

Gene Model

Click here to download ENSPMEG00000005094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000005094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000005094	csde1	96	71.168	ENSG00000009307	CSDE1	96	86.408	Homo_sapiens
ENSPMEG00000005094	csde1	95	85.714	ENSAPOG00000015538	csde1	95	85.714	Acanthochromis_polyacanthus
ENSPMEG00000005094	csde1	96	70.561	ENSAMEG00000017129	CSDE1	92	70.561	Ailuropoda_melanoleuca
ENSPMEG00000005094	csde1	85	82.162	ENSACIG00000015175	csde1	100	82.162	Amphilophus_citrinellus
ENSPMEG00000005094	csde1	95	85.714	ENSAOCG00000011510	csde1	95	85.714	Amphiprion_ocellaris
ENSPMEG00000005094	csde1	95	85.714	ENSAPEG00000007194	csde1	95	85.714	Amphiprion_percula
ENSPMEG00000005094	csde1	95	84.485	ENSATEG00000003864	csde1	95	84.485	Anabas_testudineus
ENSPMEG00000005094	csde1	96	73.293	ENSAPLG00000008797	CSDE1	98	73.293	Anas_platyrhynchos
ENSPMEG00000005094	csde1	96	74.203	ENSACAG00000003120	CSDE1	98	74.203	Anolis_carolinensis
ENSPMEG00000005094	csde1	96	71.017	ENSANAG00000024665	CSDE1	93	71.017	Aotus_nancymaae
ENSPMEG00000005094	csde1	90	56.391	ENSANAG00000028396	-	93	56.391	Aotus_nancymaae
ENSPMEG00000005094	csde1	95	85.253	ENSACLG00000013296	csde1	95	85.253	Astatotilapia_calliptera
ENSPMEG00000005094	csde1	95	80.858	ENSAMXG00000007436	csde1	95	80.858	Astyanax_mexicanus
ENSPMEG00000005094	csde1	96	70.561	ENSBTAG00000000678	CSDE1	98	70.561	Bos_taurus
ENSPMEG00000005094	csde1	96	71.017	ENSCJAG00000012565	CSDE1	93	71.017	Callithrix_jacchus
ENSPMEG00000005094	csde1	95	71.582	ENSCAFG00000009618	CSDE1	93	71.582	Canis_familiaris
ENSPMEG00000005094	csde1	96	71.320	ENSCAFG00020000481	CSDE1	98	71.320	Canis_lupus_dingo
ENSPMEG00000005094	csde1	96	70.713	ENSCHIG00000017250	CSDE1	98	70.713	Capra_hircus
ENSPMEG00000005094	csde1	96	72.851	ENSTSYG00000003747	CSDE1	98	72.851	Carlito_syrichta
ENSPMEG00000005094	csde1	97	52.969	ENSCAPG00000015128	CSDE1	95	52.969	Cavia_aperea
ENSPMEG00000005094	csde1	96	66.920	ENSCPOG00000040388	CSDE1	98	66.920	Cavia_porcellus
ENSPMEG00000005094	csde1	94	55.687	ENSCCAG00000033677	-	99	55.687	Cebus_capucinus
ENSPMEG00000005094	csde1	96	72.851	ENSCCAG00000036794	CSDE1	98	72.851	Cebus_capucinus
ENSPMEG00000005094	csde1	95	54.147	ENSCCAG00000030878	-	88	54.147	Cebus_capucinus
ENSPMEG00000005094	csde1	96	71.739	ENSCATG00000036962	CSDE1	96	71.739	Cercocebus_atys
ENSPMEG00000005094	csde1	96	71.320	ENSCLAG00000006618	CSDE1	98	71.320	Chinchilla_lanigera
ENSPMEG00000005094	csde1	96	71.168	ENSCSAG00000001658	CSDE1	93	71.168	Chlorocebus_sabaeus
ENSPMEG00000005094	csde1	88	71.242	ENSCHOG00000000918	CSDE1	80	71.242	Choloepus_hoffmanni
ENSPMEG00000005094	csde1	96	73.748	ENSCPBG00000016547	CSDE1	98	73.748	Chrysemys_picta_bellii
ENSPMEG00000005094	csde1	96	39.478	ENSCING00000014465	-	95	39.478	Ciona_intestinalis
ENSPMEG00000005094	csde1	95	39.847	ENSCSAVG00000008100	-	99	39.847	Ciona_savignyi
ENSPMEG00000005094	csde1	96	71.739	ENSCANG00000035096	CSDE1	96	71.739	Colobus_angolensis_palliatus
ENSPMEG00000005094	csde1	98	64.404	ENSCANG00000031069	-	99	64.404	Colobus_angolensis_palliatus
ENSPMEG00000005094	csde1	96	57.716	ENSCGRG00001014011	-	97	57.716	Cricetulus_griseus_chok1gshd
ENSPMEG00000005094	csde1	96	70.561	ENSCGRG00001016833	-	98	70.561	Cricetulus_griseus_chok1gshd
ENSPMEG00000005094	csde1	96	53.689	ENSCGRG00000005831	-	97	53.689	Cricetulus_griseus_crigri
ENSPMEG00000005094	csde1	96	72.398	ENSCGRG00000002225	-	98	72.398	Cricetulus_griseus_crigri
ENSPMEG00000005094	csde1	95	83.103	ENSCSEG00000002620	csde1	95	83.103	Cynoglossus_semilaevis
ENSPMEG00000005094	csde1	95	90.783	ENSCVAG00000001344	csde1	95	90.783	Cyprinodon_variegatus
ENSPMEG00000005094	csde1	89	88.350	ENSDARG00000074758	csde1	95	88.350	Danio_rerio
ENSPMEG00000005094	csde1	96	71.472	ENSDNOG00000010287	-	91	71.472	Dasypus_novemcinctus
ENSPMEG00000005094	csde1	96	71.017	ENSDORG00000011609	Csde1	98	71.017	Dipodomys_ordii
ENSPMEG00000005094	csde1	97	45.202	FBgn0263352	Unr	81	44.975	Drosophila_melanogaster
ENSPMEG00000005094	csde1	86	60.943	ENSETEG00000006280	-	99	60.943	Echinops_telfairi
ENSPMEG00000005094	csde1	87	50.000	ENSETEG00000007109	-	97	50.000	Echinops_telfairi
ENSPMEG00000005094	csde1	98	54.641	ENSETEG00000013678	-	96	54.641	Echinops_telfairi
ENSPMEG00000005094	csde1	96	71.875	ENSETEG00000002491	-	56	70.501	Echinops_telfairi
ENSPMEG00000005094	csde1	98	50.283	ENSEBUG00000008647	csde1	97	50.283	Eptatretus_burgeri
ENSPMEG00000005094	csde1	96	71.168	ENSEASG00005006284	CSDE1	98	71.168	Equus_asinus_asinus
ENSPMEG00000005094	csde1	96	71.168	ENSECAG00000020885	CSDE1	98	71.168	Equus_caballus
ENSPMEG00000005094	csde1	89	71.728	ENSEEUG00000006286	CSDE1	67	71.728	Erinaceus_europaeus
ENSPMEG00000005094	csde1	95	80.152	ENSELUG00000015507	csde1	95	78.168	Esox_lucius
ENSPMEG00000005094	csde1	96	71.320	ENSFCAG00000029266	CSDE1	98	71.320	Felis_catus
ENSPMEG00000005094	csde1	96	73.748	ENSFALG00000003407	CSDE1	98	73.748	Ficedula_albicollis
ENSPMEG00000005094	csde1	96	70.713	ENSFDAG00000007882	CSDE1	98	70.713	Fukomys_damarensis
ENSPMEG00000005094	csde1	96	90.965	ENSFHEG00000010799	csde1	97	90.965	Fundulus_heteroclitus
ENSPMEG00000005094	csde1	95	81.288	ENSGMOG00000012731	csde1	95	81.288	Gadus_morhua
ENSPMEG00000005094	csde1	95	73.313	ENSGALG00000002139	CSDE1	97	73.313	Gallus_gallus
ENSPMEG00000005094	csde1	89	91.848	ENSGAFG00000005241	csde1	92	91.848	Gambusia_affinis
ENSPMEG00000005094	csde1	95	85.407	ENSGACG00000004544	csde1	95	85.407	Gasterosteus_aculeatus
ENSPMEG00000005094	csde1	96	73.445	ENSGAGG00000017685	CSDE1	98	73.445	Gopherus_agassizii
ENSPMEG00000005094	csde1	96	71.168	ENSGGOG00000002164	CSDE1	99	71.429	Gorilla_gorilla
ENSPMEG00000005094	csde1	95	85.253	ENSHBUG00000020315	csde1	95	85.253	Haplochromis_burtoni
ENSPMEG00000005094	csde1	95	62.673	ENSHGLG00000003829	-	97	62.673	Heterocephalus_glaber_female
ENSPMEG00000005094	csde1	98	61.527	ENSHGLG00000007471	-	98	61.527	Heterocephalus_glaber_female
ENSPMEG00000005094	csde1	95	59.322	ENSHGLG00000019549	-	97	59.322	Heterocephalus_glaber_female
ENSPMEG00000005094	csde1	96	62.974	ENSHGLG00000009620	-	98	63.126	Heterocephalus_glaber_female
ENSPMEG00000005094	csde1	97	64.080	ENSHGLG00000010039	-	99	64.080	Heterocephalus_glaber_female
ENSPMEG00000005094	csde1	96	65.278	ENSHGLG00000008555	-	98	65.278	Heterocephalus_glaber_female
ENSPMEG00000005094	csde1	95	57.234	ENSHGLG00000000650	-	97	57.234	Heterocephalus_glaber_female
ENSPMEG00000005094	csde1	97	63.858	ENSHGLG00100006910	-	99	63.858	Heterocephalus_glaber_male
ENSPMEG00000005094	csde1	95	61.059	ENSHGLG00100002245	-	97	61.059	Heterocephalus_glaber_male
ENSPMEG00000005094	csde1	97	57.984	ENSHGLG00100001846	-	97	57.984	Heterocephalus_glaber_male
ENSPMEG00000005094	csde1	90	61.386	ENSHGLG00100004195	-	86	61.386	Heterocephalus_glaber_male
ENSPMEG00000005094	csde1	94	60.138	ENSHGLG00100004833	-	96	60.138	Heterocephalus_glaber_male
ENSPMEG00000005094	csde1	98	61.012	ENSHGLG00100007287	-	98	61.012	Heterocephalus_glaber_male
ENSPMEG00000005094	csde1	96	71.017	ENSHGLG00100019438	-	98	71.017	Heterocephalus_glaber_male
ENSPMEG00000005094	csde1	95	57.692	ENSHGLG00100012072	-	97	57.450	Heterocephalus_glaber_male
ENSPMEG00000005094	csde1	95	84.485	ENSHCOG00000004158	csde1	95	84.485	Hippocampus_comes
ENSPMEG00000005094	csde1	95	80.245	ENSIPUG00000000355	csde1	95	80.245	Ictalurus_punctatus
ENSPMEG00000005094	csde1	85	60.839	ENSSTOG00000032722	-	98	60.839	Ictidomys_tridecemlineatus
ENSPMEG00000005094	csde1	96	59.119	ENSSTOG00000030994	-	94	59.119	Ictidomys_tridecemlineatus
ENSPMEG00000005094	csde1	96	70.865	ENSJJAG00000019571	Csde1	98	70.865	Jaculus_jaculus
ENSPMEG00000005094	csde1	95	89.223	ENSKMAG00000005685	csde1	95	89.223	Kryptolebias_marmoratus
ENSPMEG00000005094	csde1	95	85.868	ENSLBEG00000014770	csde1	95	85.868	Labrus_bergylta
ENSPMEG00000005094	csde1	95	71.667	ENSLACG00000018452	CSDE1	98	71.667	Latimeria_chalumnae
ENSPMEG00000005094	csde1	95	80.184	ENSLOCG00000010413	csde1	89	80.184	Lepisosteus_oculatus
ENSPMEG00000005094	csde1	96	71.017	ENSLAFG00000007150	CSDE1	94	71.017	Loxodonta_africana
ENSPMEG00000005094	csde1	96	71.739	ENSMFAG00000003674	CSDE1	98	71.168	Macaca_fascicularis
ENSPMEG00000005094	csde1	96	71.168	ENSMMUG00000001974	CSDE1	99	70.346	Macaca_mulatta
ENSPMEG00000005094	csde1	96	71.739	ENSMNEG00000045247	CSDE1	96	71.739	Macaca_nemestrina
ENSPMEG00000005094	csde1	96	70.865	ENSMLEG00000038673	CSDE1	93	70.865	Mandrillus_leucophaeus
ENSPMEG00000005094	csde1	95	86.022	ENSMAMG00000008821	csde1	95	86.022	Mastacembelus_armatus
ENSPMEG00000005094	csde1	95	85.253	ENSMZEG00005021675	csde1	95	85.253	Maylandia_zebra
ENSPMEG00000005094	csde1	96	73.141	ENSMGAG00000016381	CSDE1	98	73.141	Meleagris_gallopavo
ENSPMEG00000005094	csde1	96	70.561	ENSMAUG00000014031	Csde1	98	70.561	Mesocricetus_auratus
ENSPMEG00000005094	csde1	96	73.243	ENSMICG00000002050	CSDE1	98	73.243	Microcebus_murinus
ENSPMEG00000005094	csde1	96	70.713	ENSMOCG00000018960	Csde1	98	70.713	Microtus_ochrogaster
ENSPMEG00000005094	csde1	95	85.561	ENSMMOG00000015075	csde1	95	85.561	Mola_mola
ENSPMEG00000005094	csde1	96	72.534	ENSMODG00000004685	CSDE1	98	72.534	Monodelphis_domestica
ENSPMEG00000005094	csde1	95	85.407	ENSMALG00000007132	csde1	95	85.407	Monopterus_albus
ENSPMEG00000005094	csde1	96	70.713	MGP_CAROLIEiJ_G0025444	Csde1	97	85.437	Mus_caroli
ENSPMEG00000005094	csde1	96	70.865	ENSMUSG00000068823	Csde1	97	85.437	Mus_musculus
ENSPMEG00000005094	csde1	96	70.713	MGP_PahariEiJ_G0026888	Csde1	97	85.437	Mus_pahari
ENSPMEG00000005094	csde1	96	70.713	MGP_SPRETEiJ_G0026394	Csde1	97	85.437	Mus_spretus
ENSPMEG00000005094	csde1	95	71.582	ENSMPUG00000005753	CSDE1	99	71.582	Mustela_putorius_furo
ENSPMEG00000005094	csde1	95	71.231	ENSMLUG00000005681	CSDE1	92	71.275	Myotis_lucifugus
ENSPMEG00000005094	csde1	97	51.556	ENSNGAG00000012599	-	99	51.556	Nannospalax_galili
ENSPMEG00000005094	csde1	96	70.410	ENSNGAG00000021929	Csde1	98	70.410	Nannospalax_galili
ENSPMEG00000005094	csde1	95	85.253	ENSNBRG00000020808	csde1	95	85.253	Neolamprologus_brichardi
ENSPMEG00000005094	csde1	96	71.168	ENSNLEG00000004842	CSDE1	95	71.168	Nomascus_leucogenys
ENSPMEG00000005094	csde1	95	72.330	ENSMEUG00000002677	CSDE1	82	72.330	Notamacropus_eugenii
ENSPMEG00000005094	csde1	95	70.356	ENSOPRG00000005002	CSDE1	63	70.356	Ochotona_princeps
ENSPMEG00000005094	csde1	97	51.204	ENSODEG00000005979	-	98	51.204	Octodon_degus
ENSPMEG00000005094	csde1	96	71.017	ENSODEG00000007383	-	98	71.017	Octodon_degus
ENSPMEG00000005094	csde1	95	85.100	ENSONIG00000009309	csde1	95	85.100	Oreochromis_niloticus
ENSPMEG00000005094	csde1	96	82.353	ENSOANG00000003346	-	80	82.353	Ornithorhynchus_anatinus
ENSPMEG00000005094	csde1	96	70.713	ENSOCUG00000016438	CSDE1	93	70.713	Oryctolagus_cuniculus
ENSPMEG00000005094	csde1	95	84.332	ENSORLG00000000707	csde1	95	84.332	Oryzias_latipes
ENSPMEG00000005094	csde1	95	84.025	ENSORLG00020005148	csde1	95	84.025	Oryzias_latipes_hni
ENSPMEG00000005094	csde1	95	84.178	ENSORLG00015019415	csde1	95	84.178	Oryzias_latipes_hsok
ENSPMEG00000005094	csde1	96	82.796	ENSOMEG00000015656	csde1	95	83.871	Oryzias_melastigma
ENSPMEG00000005094	csde1	96	71.168	ENSOGAG00000012127	CSDE1	92	71.168	Otolemur_garnettii
ENSPMEG00000005094	csde1	96	70.713	ENSOARG00000020034	CSDE1	92	70.713	Ovis_aries
ENSPMEG00000005094	csde1	96	71.168	ENSPPAG00000025861	CSDE1	98	71.168	Pan_paniscus
ENSPMEG00000005094	csde1	96	71.320	ENSPPRG00000006747	CSDE1	93	71.320	Panthera_pardus
ENSPMEG00000005094	csde1	96	71.320	ENSPTIG00000015468	CSDE1	98	71.320	Panthera_tigris_altaica
ENSPMEG00000005094	csde1	97	71.125	ENSPTRG00000033721	CSDE1	98	71.168	Pan_troglodytes
ENSPMEG00000005094	csde1	96	71.168	ENSPANG00000018873	CSDE1	98	71.168	Papio_anubis
ENSPMEG00000005094	csde1	95	79.877	ENSPKIG00000009459	csde1	95	79.877	Paramormyrops_kingsleyae
ENSPMEG00000005094	csde1	93	71.875	ENSPSIG00000003823	CSDE1	94	71.875	Pelodiscus_sinensis
ENSPMEG00000005094	csde1	95	81.748	ENSPMGG00000000772	csde1	95	81.748	Periophthalmus_magnuspinnatus
ENSPMEG00000005094	csde1	96	70.713	ENSPEMG00000020357	-	98	70.713	Peromyscus_maniculatus_bairdii
ENSPMEG00000005094	csde1	96	72.534	ENSPCIG00000022587	CSDE1	98	72.534	Phascolarctos_cinereus
ENSPMEG00000005094	csde1	95	93.395	ENSPFOG00000012664	csde1	98	92.516	Poecilia_formosa
ENSPMEG00000005094	csde1	97	99.221	ENSPLAG00000017680	csde1	95	99.221	Poecilia_latipinna
ENSPMEG00000005094	csde1	95	92.061	ENSPREG00000011631	csde1	95	91.416	Poecilia_reticulata
ENSPMEG00000005094	csde1	96	71.017	ENSPPYG00000000996	CSDE1	98	71.017	Pongo_abelii
ENSPMEG00000005094	csde1	95	71.197	ENSPCAG00000014368	CSDE1	76	71.197	Procavia_capensis
ENSPMEG00000005094	csde1	86	59.108	ENSPCOG00000008223	-	92	59.108	Propithecus_coquereli
ENSPMEG00000005094	csde1	95	72.670	ENSPCOG00000017893	CSDE1	99	72.670	Propithecus_coquereli
ENSPMEG00000005094	csde1	89	70.181	ENSPVAG00000008225	CSDE1	86	70.181	Pteropus_vampyrus
ENSPMEG00000005094	csde1	95	85.253	ENSPNYG00000013745	csde1	95	85.253	Pundamilia_nyererei
ENSPMEG00000005094	csde1	95	82.083	ENSPNAG00000001958	csde1	95	82.083	Pygocentrus_nattereri
ENSPMEG00000005094	csde1	96	70.561	ENSRNOG00000061058	Csde1	98	70.561	Rattus_norvegicus
ENSPMEG00000005094	csde1	96	71.663	ENSRBIG00000038088	-	97	71.663	Rhinopithecus_bieti
ENSPMEG00000005094	csde1	96	65.809	ENSRBIG00000038966	-	92	65.809	Rhinopithecus_bieti
ENSPMEG00000005094	csde1	96	71.566	ENSRROG00000043101	CSDE1	96	71.566	Rhinopithecus_roxellana
ENSPMEG00000005094	csde1	96	71.017	ENSSBOG00000035592	CSDE1	93	71.017	Saimiri_boliviensis_boliviensis
ENSPMEG00000005094	csde1	96	72.534	ENSSHAG00000009831	CSDE1	98	72.534	Sarcophilus_harrisii
ENSPMEG00000005094	csde1	95	79.908	ENSSFOG00015007498	csde1	97	79.908	Scleropages_formosus
ENSPMEG00000005094	csde1	95	84.946	ENSSMAG00000007203	csde1	95	84.946	Scophthalmus_maximus
ENSPMEG00000005094	csde1	95	86.482	ENSSDUG00000015380	csde1	95	86.482	Seriola_dumerili
ENSPMEG00000005094	csde1	95	86.482	ENSSLDG00000008819	csde1	95	86.482	Seriola_lalandi_dorsalis
ENSPMEG00000005094	csde1	96	70.713	ENSSARG00000000738	CSDE1	92	70.713	Sorex_araneus
ENSPMEG00000005094	csde1	95	74.233	ENSSPUG00000008714	CSDE1	97	74.233	Sphenodon_punctatus
ENSPMEG00000005094	csde1	95	86.636	ENSSPAG00000000716	csde1	95	86.636	Stegastes_partitus
ENSPMEG00000005094	csde1	96	71.472	ENSSSCG00000006752	CSDE1	98	71.472	Sus_scrofa
ENSPMEG00000005094	csde1	96	72.769	ENSTGUG00000000972	CSDE1	98	72.769	Taeniopygia_guttata
ENSPMEG00000005094	csde1	96	78.593	ENSTRUG00000007996	csde1	95	78.593	Takifugu_rubripes
ENSPMEG00000005094	csde1	89	93.204	ENSTNIG00000010878	csde1	91	93.204	Tetraodon_nigroviridis
ENSPMEG00000005094	csde1	88	81.667	ENSTBEG00000011880	-	58	81.667	Tupaia_belangeri
ENSPMEG00000005094	csde1	96	71.017	ENSTTRG00000015583	CSDE1	92	71.017	Tursiops_truncatus
ENSPMEG00000005094	csde1	89	72.185	ENSUAMG00000021779	-	97	72.185	Ursus_americanus
ENSPMEG00000005094	csde1	86	66.609	ENSUAMG00000024289	-	99	66.609	Ursus_americanus
ENSPMEG00000005094	csde1	96	66.464	ENSUMAG00000009720	-	94	66.464	Ursus_maritimus
ENSPMEG00000005094	csde1	96	71.981	ENSUMAG00000011714	-	96	71.981	Ursus_maritimus
ENSPMEG00000005094	csde1	96	73.659	ENSVPAG00000000749	CSDE1	77	73.659	Vicugna_pacos
ENSPMEG00000005094	csde1	86	68.897	ENSVVUG00000009890	CSDE1	93	68.897	Vulpes_vulpes
ENSPMEG00000005094	csde1	96	72.205	ENSXETG00000021448	csde1	97	72.205	Xenopus_tropicalis
ENSPMEG00000005094	csde1	91	74.684	ENSXCOG00000000035	csde1	96	74.684	Xiphophorus_couchianus
ENSPMEG00000005094	csde1	95	92.934	ENSXMAG00000009080	csde1	95	92.934	Xiphophorus_maculatus