EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000005183 (Gene tree)
Gene ID: 106906010
Gene Symbol: prpf18
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 8785 bases
Position: chrKQ551058.1:30430-39214
Accession: 106906010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000003970	PRP4	PF08799.11	2.8e-13	1	1
ENSPMEP00000023504	PRP4	PF08799.11	2.9e-13	1	1
ENSPMEP00000003970	Prp18	PF02840.15	6.8e-63	1	1
ENSPMEP00000023504	Prp18	PF02840.15	7e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000009983	-	2327	XM_014971081	ENSPMEP00000023504	350 (aa)	XP_014826567	UPI00072E3F59
ENSPMET00000009990	-	2300	XM_014971088	ENSPMEP00000003970	341 (aa)	XP_014826574	UPI00072D9B2E

Gene Model

Click here to download ENSPMEG00000005183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000005183's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000005183	prpf18	100	83.626	ENSG00000165630	PRPF18	100	83.626	Homo_sapiens
ENSPMEG00000005183	prpf18	100	92.962	ENSAPOG00000024177	prpf18	100	92.962	Acanthochromis_polyacanthus
ENSPMEG00000005183	prpf18	100	83.041	ENSAMEG00000013591	-	100	83.041	Ailuropoda_melanoleuca
ENSPMEG00000005183	prpf18	100	92.375	ENSACIG00000001186	prpf18	100	92.375	Amphilophus_citrinellus
ENSPMEG00000005183	prpf18	98	93.413	ENSAOCG00000006572	prpf18	94	92.690	Amphiprion_ocellaris
ENSPMEG00000005183	prpf18	100	93.548	ENSAPEG00000004564	prpf18	100	93.548	Amphiprion_percula
ENSPMEG00000005183	prpf18	100	92.669	ENSATEG00000000303	prpf18	100	92.669	Anabas_testudineus
ENSPMEG00000005183	prpf18	99	81.765	ENSAPLG00000003387	-	99	81.765	Anas_platyrhynchos
ENSPMEG00000005183	prpf18	100	82.558	ENSACAG00000000818	-	100	82.558	Anolis_carolinensis
ENSPMEG00000005183	prpf18	100	83.626	ENSANAG00000037445	-	100	83.626	Aotus_nancymaae
ENSPMEG00000005183	prpf18	100	92.082	ENSACLG00000026296	prpf18	100	92.082	Astatotilapia_calliptera
ENSPMEG00000005183	prpf18	100	89.143	ENSAMXG00000012848	prpf18	100	89.143	Astyanax_mexicanus
ENSPMEG00000005183	prpf18	100	83.041	ENSBTAG00000017244	PRPF18	100	83.041	Bos_taurus
ENSPMEG00000005183	prpf18	98	39.193	WBGene00009320	F32B6.3	97	39.193	Caenorhabditis_elegans
ENSPMEG00000005183	prpf18	100	83.626	ENSCJAG00000009432	-	100	83.626	Callithrix_jacchus
ENSPMEG00000005183	prpf18	100	83.041	ENSCAFG00000004735	-	100	83.041	Canis_familiaris
ENSPMEG00000005183	prpf18	100	83.041	ENSCAFG00020007712	-	100	83.041	Canis_lupus_dingo
ENSPMEG00000005183	prpf18	100	83.041	ENSCHIG00000000499	-	100	83.041	Capra_hircus
ENSPMEG00000005183	prpf18	100	83.333	ENSTSYG00000003517	-	100	83.333	Carlito_syrichta
ENSPMEG00000005183	prpf18	100	83.626	ENSCPOG00000021069	-	100	83.626	Cavia_porcellus
ENSPMEG00000005183	prpf18	100	83.626	ENSCCAG00000036822	-	100	83.626	Cebus_capucinus
ENSPMEG00000005183	prpf18	100	72.807	ENSCATG00000016633	-	100	72.807	Cercocebus_atys
ENSPMEG00000005183	prpf18	100	83.333	ENSCLAG00000011770	-	100	83.333	Chinchilla_lanigera
ENSPMEG00000005183	prpf18	100	82.051	ENSCSAG00000013109	-	100	82.051	Chlorocebus_sabaeus
ENSPMEG00000005183	prpf18	100	79.213	ENSCPBG00000003100	-	100	80.056	Chrysemys_picta_bellii
ENSPMEG00000005183	prpf18	99	56.176	ENSCING00000020481	-	97	55.362	Ciona_intestinalis
ENSPMEG00000005183	prpf18	99	56.012	ENSCSAVG00000010546	-	99	55.294	Ciona_savignyi
ENSPMEG00000005183	prpf18	100	83.626	ENSCANG00000034900	-	100	83.626	Colobus_angolensis_palliatus
ENSPMEG00000005183	prpf18	100	83.333	ENSCGRG00001023665	Prpf18	100	83.333	Cricetulus_griseus_chok1gshd
ENSPMEG00000005183	prpf18	100	83.333	ENSCGRG00000014690	Prpf18	100	83.333	Cricetulus_griseus_crigri
ENSPMEG00000005183	prpf18	100	88.270	ENSCSEG00000005536	prpf18	99	88.270	Cynoglossus_semilaevis
ENSPMEG00000005183	prpf18	100	96.857	ENSCVAG00000012401	prpf18	100	96.857	Cyprinodon_variegatus
ENSPMEG00000005183	prpf18	100	88.012	ENSDARG00000058306	prpf18	100	88.012	Danio_rerio
ENSPMEG00000005183	prpf18	100	83.041	ENSDNOG00000035607	-	100	83.041	Dasypus_novemcinctus
ENSPMEG00000005183	prpf18	100	82.749	ENSDORG00000000858	Prpf18	100	82.749	Dipodomys_ordii
ENSPMEG00000005183	prpf18	99	53.254	FBgn0027784	Prp18	98	53.254	Drosophila_melanogaster
ENSPMEG00000005183	prpf18	100	74.854	ENSETEG00000015060	-	100	74.854	Echinops_telfairi
ENSPMEG00000005183	prpf18	100	69.452	ENSEBUG00000016502	prpf18	99	68.588	Eptatretus_burgeri
ENSPMEG00000005183	prpf18	100	83.333	ENSEASG00005019373	-	100	83.333	Equus_asinus_asinus
ENSPMEG00000005183	prpf18	100	83.333	ENSECAG00000006997	PRPF18	100	83.333	Equus_caballus
ENSPMEG00000005183	prpf18	92	51.582	ENSEEUG00000001171	-	100	51.582	Erinaceus_europaeus
ENSPMEG00000005183	prpf18	100	86.880	ENSELUG00000022190	prpf18	100	86.880	Esox_lucius
ENSPMEG00000005183	prpf18	100	83.333	ENSFCAG00000004436	-	100	83.333	Felis_catus
ENSPMEG00000005183	prpf18	93	79.077	ENSFALG00000001912	-	97	79.385	Ficedula_albicollis
ENSPMEG00000005183	prpf18	99	56.734	ENSFDAG00000010713	-	97	56.734	Fukomys_damarensis
ENSPMEG00000005183	prpf18	94	85.312	ENSFDAG00000014026	-	100	85.312	Fukomys_damarensis
ENSPMEG00000005183	prpf18	80	98.535	ENSFHEG00000020125	prpf18	100	98.535	Fundulus_heteroclitus
ENSPMEG00000005183	prpf18	99	86.471	ENSGMOG00000012210	prpf18	99	86.471	Gadus_morhua
ENSPMEG00000005183	prpf18	100	82.749	ENSGALG00000043593	-	100	82.749	Gallus_gallus
ENSPMEG00000005183	prpf18	100	97.067	ENSGAFG00000006034	prpf18	100	97.067	Gambusia_affinis
ENSPMEG00000005183	prpf18	100	88.563	ENSGACG00000012232	prpf18	100	88.563	Gasterosteus_aculeatus
ENSPMEG00000005183	prpf18	100	83.041	ENSGAGG00000016878	-	100	83.041	Gopherus_agassizii
ENSPMEG00000005183	prpf18	92	82.595	ENSGGOG00000025188	-	96	82.595	Gorilla_gorilla
ENSPMEG00000005183	prpf18	100	92.082	ENSHBUG00000010264	prpf18	100	92.082	Haplochromis_burtoni
ENSPMEG00000005183	prpf18	100	83.041	ENSHGLG00000018534	PRPF18	100	83.041	Heterocephalus_glaber_female
ENSPMEG00000005183	prpf18	94	85.000	ENSHGLG00100012161	-	98	85.000	Heterocephalus_glaber_male
ENSPMEG00000005183	prpf18	100	92.375	ENSHCOG00000015987	prpf18	100	92.375	Hippocampus_comes
ENSPMEG00000005183	prpf18	100	82.720	ENSIPUG00000007432	prpf18	100	83.286	Ictalurus_punctatus
ENSPMEG00000005183	prpf18	100	83.333	ENSSTOG00000008735	-	100	83.333	Ictidomys_tridecemlineatus
ENSPMEG00000005183	prpf18	100	60.933	ENSJJAG00000015191	-	100	60.933	Jaculus_jaculus
ENSPMEG00000005183	prpf18	100	83.626	ENSJJAG00000024041	-	100	83.626	Jaculus_jaculus
ENSPMEG00000005183	prpf18	100	93.842	ENSKMAG00000012124	prpf18	100	93.842	Kryptolebias_marmoratus
ENSPMEG00000005183	prpf18	100	85.924	ENSLBEG00000028466	prpf18	99	87.202	Labrus_bergylta
ENSPMEG00000005183	prpf18	100	83.333	ENSLACG00000009885	prpf18	100	83.626	Latimeria_chalumnae
ENSPMEG00000005183	prpf18	100	87.427	ENSLOCG00000016736	prpf18	100	87.427	Lepisosteus_oculatus
ENSPMEG00000005183	prpf18	100	83.626	ENSLAFG00000007753	-	100	83.626	Loxodonta_africana
ENSPMEG00000005183	prpf18	100	83.626	ENSMFAG00000000540	-	100	83.626	Macaca_fascicularis
ENSPMEG00000005183	prpf18	100	83.626	ENSMMUG00000015071	PRPF18	100	83.626	Macaca_mulatta
ENSPMEG00000005183	prpf18	100	83.626	ENSMNEG00000024679	-	100	83.626	Macaca_nemestrina
ENSPMEG00000005183	prpf18	100	68.421	ENSMLEG00000031715	-	100	68.421	Mandrillus_leucophaeus
ENSPMEG00000005183	prpf18	100	91.202	ENSMAMG00000006610	prpf18	100	91.202	Mastacembelus_armatus
ENSPMEG00000005183	prpf18	100	92.082	ENSMZEG00005019392	prpf18	100	92.082	Maylandia_zebra
ENSPMEG00000005183	prpf18	100	82.749	ENSMGAG00000005023	-	100	82.749	Meleagris_gallopavo
ENSPMEG00000005183	prpf18	100	83.918	ENSMICG00000006572	-	100	83.918	Microcebus_murinus
ENSPMEG00000005183	prpf18	100	83.626	ENSMOCG00000021468	Prpf18	100	83.626	Microtus_ochrogaster
ENSPMEG00000005183	prpf18	100	92.962	ENSMMOG00000013012	prpf18	100	92.962	Mola_mola
ENSPMEG00000005183	prpf18	96	78.402	ENSMODG00000016902	-	92	78.402	Monodelphis_domestica
ENSPMEG00000005183	prpf18	100	75.439	ENSMODG00000024043	-	100	75.439	Monodelphis_domestica
ENSPMEG00000005183	prpf18	100	84.104	ENSMALG00000005486	prpf18	100	84.393	Monopterus_albus
ENSPMEG00000005183	prpf18	100	83.041	MGP_CAROLIEiJ_G0023143	Prpf18	100	94.521	Mus_caroli
ENSPMEG00000005183	prpf18	100	83.333	ENSMUSG00000039449	Prpf18	100	94.521	Mus_musculus
ENSPMEG00000005183	prpf18	100	83.333	MGP_PahariEiJ_G0019203	Prpf18	100	94.521	Mus_pahari
ENSPMEG00000005183	prpf18	100	83.333	MGP_SPRETEiJ_G0024061	Prpf18	100	94.521	Mus_spretus
ENSPMEG00000005183	prpf18	100	82.749	ENSMPUG00000000938	-	100	82.749	Mustela_putorius_furo
ENSPMEG00000005183	prpf18	100	82.749	ENSMLUG00000009200	-	100	82.749	Myotis_lucifugus
ENSPMEG00000005183	prpf18	68	81.034	ENSNGAG00000023550	-	83	81.034	Nannospalax_galili
ENSPMEG00000005183	prpf18	100	83.626	ENSNGAG00000012500	-	100	83.626	Nannospalax_galili
ENSPMEG00000005183	prpf18	100	91.789	ENSNBRG00000001778	prpf18	100	91.789	Neolamprologus_brichardi
ENSPMEG00000005183	prpf18	100	83.626	ENSNLEG00000012186	-	100	83.626	Nomascus_leucogenys
ENSPMEG00000005183	prpf18	76	71.042	ENSMEUG00000005032	-	75	71.042	Notamacropus_eugenii
ENSPMEG00000005183	prpf18	77	63.774	ENSOPRG00000002153	-	100	63.774	Ochotona_princeps
ENSPMEG00000005183	prpf18	100	82.749	ENSODEG00000003770	-	100	82.749	Octodon_degus
ENSPMEG00000005183	prpf18	98	91.617	ENSONIG00000014854	prpf18	96	91.617	Oreochromis_niloticus
ENSPMEG00000005183	prpf18	100	83.918	ENSOANG00000015404	-	100	83.918	Ornithorhynchus_anatinus
ENSPMEG00000005183	prpf18	100	83.333	ENSOCUG00000027756	-	96	84.098	Oryctolagus_cuniculus
ENSPMEG00000005183	prpf18	100	89.714	ENSORLG00000010293	prpf18	100	89.714	Oryzias_latipes
ENSPMEG00000005183	prpf18	100	90.323	ENSORLG00020001530	prpf18	100	90.323	Oryzias_latipes_hni
ENSPMEG00000005183	prpf18	100	90.029	ENSORLG00015013705	prpf18	100	90.029	Oryzias_latipes_hsok
ENSPMEG00000005183	prpf18	100	91.789	ENSOMEG00000009167	prpf18	100	91.789	Oryzias_melastigma
ENSPMEG00000005183	prpf18	100	82.749	ENSOGAG00000007294	-	100	82.749	Otolemur_garnettii
ENSPMEG00000005183	prpf18	100	81.481	ENSOARG00000006243	-	100	81.481	Ovis_aries
ENSPMEG00000005183	prpf18	100	83.626	ENSPPAG00000041959	-	100	83.626	Pan_paniscus
ENSPMEG00000005183	prpf18	100	83.333	ENSPPRG00000000107	-	100	83.333	Panthera_pardus
ENSPMEG00000005183	prpf18	100	83.333	ENSPTIG00000021094	-	100	83.333	Panthera_tigris_altaica
ENSPMEG00000005183	prpf18	100	83.626	ENSPTRG00000002306	PRPF18	100	83.626	Pan_troglodytes
ENSPMEG00000005183	prpf18	100	83.333	ENSPANG00000023346	-	100	83.333	Papio_anubis
ENSPMEG00000005183	prpf18	86	100.000	ENSPKIG00000014128	prpf18	96	85.755	Paramormyrops_kingsleyae
ENSPMEG00000005183	prpf18	100	82.749	ENSPSIG00000016064	-	100	82.749	Pelodiscus_sinensis
ENSPMEG00000005183	prpf18	100	83.626	ENSPMGG00000016486	prpf18	100	83.626	Periophthalmus_magnuspinnatus
ENSPMEG00000005183	prpf18	100	83.333	ENSPEMG00000013704	Prpf18	100	83.333	Peromyscus_maniculatus_bairdii
ENSPMEG00000005183	prpf18	100	73.775	ENSPMAG00000000204	prpf18	100	73.714	Petromyzon_marinus
ENSPMEG00000005183	prpf18	92	82.595	ENSPCIG00000012963	-	99	82.595	Phascolarctos_cinereus
ENSPMEG00000005183	prpf18	100	99.714	ENSPFOG00000017611	prpf18	100	99.714	Poecilia_formosa
ENSPMEG00000005183	prpf18	100	99.707	ENSPLAG00000000369	prpf18	100	99.707	Poecilia_latipinna
ENSPMEG00000005183	prpf18	100	97.067	ENSPREG00000015232	prpf18	100	97.067	Poecilia_reticulata
ENSPMEG00000005183	prpf18	100	83.333	ENSPPYG00000002101	PRPF18	100	83.333	Pongo_abelii
ENSPMEG00000005183	prpf18	100	65.789	ENSPCAG00000010833	-	100	65.789	Procavia_capensis
ENSPMEG00000005183	prpf18	100	79.765	ENSPCOG00000013057	-	100	79.765	Propithecus_coquereli
ENSPMEG00000005183	prpf18	100	50.000	ENSPVAG00000002947	-	100	50.000	Pteropus_vampyrus
ENSPMEG00000005183	prpf18	100	91.789	ENSPNYG00000003554	prpf18	100	91.789	Pundamilia_nyererei
ENSPMEG00000005183	prpf18	100	86.610	ENSPNAG00000023151	prpf18	100	86.610	Pygocentrus_nattereri
ENSPMEG00000005183	prpf18	100	83.333	ENSRNOG00000018396	Prpf18	100	83.333	Rattus_norvegicus
ENSPMEG00000005183	prpf18	100	83.918	ENSRBIG00000028028	-	100	83.918	Rhinopithecus_bieti
ENSPMEG00000005183	prpf18	100	83.626	ENSRROG00000040695	-	100	83.626	Rhinopithecus_roxellana
ENSPMEG00000005183	prpf18	100	83.626	ENSSBOG00000034482	-	100	83.626	Saimiri_boliviensis_boliviensis
ENSPMEG00000005183	prpf18	100	69.298	ENSSHAG00000009669	-	100	69.298	Sarcophilus_harrisii
ENSPMEG00000005183	prpf18	100	83.333	ENSSHAG00000016463	-	100	83.333	Sarcophilus_harrisii
ENSPMEG00000005183	prpf18	98	84.638	ENSSFOG00015022118	prpf18	100	79.251	Scleropages_formosus
ENSPMEG00000005183	prpf18	77	43.939	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSPMEG00000005183	prpf18	100	90.029	ENSSMAG00000005308	prpf18	100	90.029	Scophthalmus_maximus
ENSPMEG00000005183	prpf18	100	92.669	ENSSDUG00000015428	prpf18	100	92.669	Seriola_dumerili
ENSPMEG00000005183	prpf18	100	92.375	ENSSLDG00000023989	prpf18	100	92.375	Seriola_lalandi_dorsalis
ENSPMEG00000005183	prpf18	100	55.263	ENSSARG00000005307	-	100	55.263	Sorex_araneus
ENSPMEG00000005183	prpf18	100	83.041	ENSSPUG00000002619	-	100	83.041	Sphenodon_punctatus
ENSPMEG00000005183	prpf18	100	92.962	ENSSPAG00000019502	prpf18	100	92.962	Stegastes_partitus
ENSPMEG00000005183	prpf18	100	83.041	ENSSSCG00000026354	-	100	83.041	Sus_scrofa
ENSPMEG00000005183	prpf18	100	82.164	ENSTGUG00000002286	-	100	82.164	Taeniopygia_guttata
ENSPMEG00000005183	prpf18	100	90.029	ENSTRUG00000011278	prpf18	100	90.029	Takifugu_rubripes
ENSPMEG00000005183	prpf18	100	89.150	ENSTNIG00000000911	prpf18	100	89.150	Tetraodon_nigroviridis
ENSPMEG00000005183	prpf18	80	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSPMEG00000005183	prpf18	100	83.918	ENSTTRG00000011117	PRPF18	100	83.918	Tursiops_truncatus
ENSPMEG00000005183	prpf18	91	85.531	ENSUAMG00000001815	-	93	85.531	Ursus_americanus
ENSPMEG00000005183	prpf18	100	78.363	ENSUMAG00000012329	-	100	78.363	Ursus_maritimus
ENSPMEG00000005183	prpf18	100	77.485	ENSVPAG00000011486	-	100	77.485	Vicugna_pacos
ENSPMEG00000005183	prpf18	100	83.041	ENSVVUG00000005453	-	100	83.041	Vulpes_vulpes
ENSPMEG00000005183	prpf18	100	74.783	ENSXETG00000024057	prpf18	100	74.783	Xenopus_tropicalis
ENSPMEG00000005183	prpf18	100	97.668	ENSXCOG00000020414	prpf18	100	97.668	Xiphophorus_couchianus
ENSPMEG00000005183	prpf18	100	98.571	ENSXMAG00000004713	prpf18	91	98.571	Xiphophorus_maculatus