EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000005218 (Gene tree)
Gene ID: 106928166
Gene Symbol: smg7
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 19419 bases
Position: chrKQ551990.1:3456-22874
Accession: 106928166
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000023547	EST1	PF10374.9	2.2e-24	1	1
ENSPMEP00000023547	EST1_DNA_bind	PF10373.9	2.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000009888	-	4268	XM_015004237	ENSPMEP00000023547	1105 (aa)	XP_014859723	UPI00072DE340

Gene Model

Click here to download ENSPMEG00000005218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000005218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000005218	smg7	99	63.790	ENSG00000116698	SMG7	88	90.683	Homo_sapiens
ENSPMEG00000005218	smg7	88	87.370	ENSAPOG00000009611	smg7	93	87.370	Acanthochromis_polyacanthus
ENSPMEG00000005218	smg7	99	62.890	ENSAMEG00000002357	SMG7	96	62.979	Ailuropoda_melanoleuca
ENSPMEG00000005218	smg7	96	79.291	ENSACIG00000015152	smg7	97	79.963	Amphilophus_citrinellus
ENSPMEG00000005218	smg7	99	84.395	ENSAOCG00000013538	smg7	97	85.305	Amphiprion_ocellaris
ENSPMEG00000005218	smg7	99	84.409	ENSAPEG00000007851	smg7	97	85.318	Amphiprion_percula
ENSPMEG00000005218	smg7	99	83.542	ENSATEG00000006931	smg7	97	83.631	Anabas_testudineus
ENSPMEG00000005218	smg7	99	62.986	ENSAPLG00000015811	SMG7	96	62.677	Anas_platyrhynchos
ENSPMEG00000005218	smg7	99	60.714	ENSACAG00000014989	SMG7	97	60.305	Anolis_carolinensis
ENSPMEG00000005218	smg7	99	63.766	ENSANAG00000028114	SMG7	85	90.446	Aotus_nancymaae
ENSPMEG00000005218	smg7	99	82.047	ENSACLG00000022079	smg7	97	81.655	Astatotilapia_calliptera
ENSPMEG00000005218	smg7	99	73.357	ENSAMXG00000020809	smg7	97	73.447	Astyanax_mexicanus
ENSPMEG00000005218	smg7	99	63.805	ENSBTAG00000008003	SMG7	96	63.717	Bos_taurus
ENSPMEG00000005218	smg7	99	63.677	ENSCJAG00000005135	SMG7	86	90.446	Callithrix_jacchus
ENSPMEG00000005218	smg7	99	59.231	ENSCAFG00000013276	SMG7	94	59.316	Canis_familiaris
ENSPMEG00000005218	smg7	99	62.832	ENSCAFG00020015475	SMG7	89	87.805	Canis_lupus_dingo
ENSPMEG00000005218	smg7	99	59.949	ENSCHIG00000018192	SMG7	97	60.120	Capra_hircus
ENSPMEG00000005218	smg7	99	63.669	ENSTSYG00000002667	SMG7	80	91.613	Carlito_syrichta
ENSPMEG00000005218	smg7	99	59.487	ENSCPOG00000008906	SMG7	96	59.107	Cavia_porcellus
ENSPMEG00000005218	smg7	99	63.943	ENSCCAG00000028596	SMG7	85	90.446	Cebus_capucinus
ENSPMEG00000005218	smg7	99	64.057	ENSCATG00000011063	SMG7	85	90.446	Cercocebus_atys
ENSPMEG00000005218	smg7	99	63.773	ENSCLAG00000010751	SMG7	96	64.039	Chinchilla_lanigera
ENSPMEG00000005218	smg7	99	59.983	ENSCSAG00000012654	SMG7	94	60.154	Chlorocebus_sabaeus
ENSPMEG00000005218	smg7	94	56.436	ENSCHOG00000010522	SMG7	93	56.643	Choloepus_hoffmanni
ENSPMEG00000005218	smg7	99	64.831	ENSCPBG00000015724	SMG7	96	64.444	Chrysemys_picta_bellii
ENSPMEG00000005218	smg7	99	63.929	ENSCANG00000015680	SMG7	85	90.446	Colobus_angolensis_palliatus
ENSPMEG00000005218	smg7	99	63.065	ENSCGRG00001013705	Smg7	96	63.242	Cricetulus_griseus_chok1gshd
ENSPMEG00000005218	smg7	99	62.900	ENSCGRG00000018401	Smg7	97	63.078	Cricetulus_griseus_crigri
ENSPMEG00000005218	smg7	98	88.219	ENSCVAG00000011842	smg7	97	88.311	Cyprinodon_variegatus
ENSPMEG00000005218	smg7	99	73.046	ENSDARG00000060767	smg7	97	73.632	Danio_rerio
ENSPMEG00000005218	smg7	99	60.154	ENSDORG00000007331	Smg7	96	60.497	Dipodomys_ordii
ENSPMEG00000005218	smg7	99	59.983	ENSETEG00000002654	SMG7	99	60.411	Echinops_telfairi
ENSPMEG00000005218	smg7	99	60.583	ENSEASG00005006524	SMG7	96	60.668	Equus_asinus_asinus
ENSPMEG00000005218	smg7	92	85.970	ENSECAG00000004313	SMG7	94	85.757	Equus_caballus
ENSPMEG00000005218	smg7	99	59.399	ENSEEUG00000002024	SMG7	94	59.399	Erinaceus_europaeus
ENSPMEG00000005218	smg7	99	73.712	ENSELUG00000010293	smg7	99	74.067	Esox_lucius
ENSPMEG00000005218	smg7	99	61.402	ENSFCAG00000010900	SMG7	96	61.146	Felis_catus
ENSPMEG00000005218	smg7	98	58.977	ENSFALG00000003047	SMG7	97	59.931	Ficedula_albicollis
ENSPMEG00000005218	smg7	99	60.429	ENSFDAG00000012121	SMG7	96	59.931	Fukomys_damarensis
ENSPMEG00000005218	smg7	99	89.502	ENSFHEG00000011073	smg7	97	89.502	Fundulus_heteroclitus
ENSPMEG00000005218	smg7	85	79.323	ENSGMOG00000004916	smg7	91	79.323	Gadus_morhua
ENSPMEG00000005218	smg7	99	63.204	ENSGALG00000004667	SMG7	96	63.242	Gallus_gallus
ENSPMEG00000005218	smg7	99	97.731	ENSGAFG00000019000	smg7	97	97.731	Gambusia_affinis
ENSPMEG00000005218	smg7	99	79.317	ENSGACG00000001634	smg7	99	79.676	Gasterosteus_aculeatus
ENSPMEG00000005218	smg7	99	63.790	ENSGGOG00000002342	SMG7	82	89.375	Gorilla_gorilla
ENSPMEG00000005218	smg7	99	81.859	ENSHBUG00000003726	smg7	99	81.671	Haplochromis_burtoni
ENSPMEG00000005218	smg7	99	64.146	ENSHGLG00000009353	SMG7	96	64.324	Heterocephalus_glaber_female
ENSPMEG00000005218	smg7	99	64.057	ENSHGLG00100009637	-	96	64.235	Heterocephalus_glaber_male
ENSPMEG00000005218	smg7	99	54.936	ENSHGLG00100004878	-	96	54.725	Heterocephalus_glaber_male
ENSPMEG00000005218	smg7	99	73.442	ENSIPUG00000016997	smg7	97	73.351	Ictalurus_punctatus
ENSPMEG00000005218	smg7	99	62.343	ENSSTOG00000000401	SMG7	96	62.522	Ictidomys_tridecemlineatus
ENSPMEG00000005218	smg7	99	59.966	ENSJJAG00000012351	Smg7	96	60.137	Jaculus_jaculus
ENSPMEG00000005218	smg7	97	81.169	ENSKMAG00000004900	smg7	97	81.262	Kryptolebias_marmoratus
ENSPMEG00000005218	smg7	99	81.047	ENSLBEG00000002983	smg7	96	81.769	Labrus_bergylta
ENSPMEG00000005218	smg7	66	62.602	ENSLBEG00000005220	-	75	73.869	Labrus_bergylta
ENSPMEG00000005218	smg7	99	64.799	ENSLACG00000000972	SMG7	97	64.991	Latimeria_chalumnae
ENSPMEG00000005218	smg7	99	64.746	ENSLOCG00000002010	smg7	96	64.661	Lepisosteus_oculatus
ENSPMEG00000005218	smg7	99	59.845	ENSLAFG00000008186	SMG7	96	59.828	Loxodonta_africana
ENSPMEG00000005218	smg7	99	62.266	ENSMFAG00000031653	SMG7	85	90.446	Macaca_fascicularis
ENSPMEG00000005218	smg7	99	63.069	ENSMMUG00000018458	SMG7	96	63.247	Macaca_mulatta
ENSPMEG00000005218	smg7	99	64.057	ENSMNEG00000034798	SMG7	85	90.446	Macaca_nemestrina
ENSPMEG00000005218	smg7	99	64.057	ENSMLEG00000037170	SMG7	96	64.235	Mandrillus_leucophaeus
ENSPMEG00000005218	smg7	90	81.009	ENSMAMG00000018733	smg7	85	81.683	Mastacembelus_armatus
ENSPMEG00000005218	smg7	99	82.316	ENSMZEG00005015247	smg7	97	80.948	Maylandia_zebra
ENSPMEG00000005218	smg7	99	62.743	ENSMGAG00000001561	SMG7	96	62.689	Meleagris_gallopavo
ENSPMEG00000005218	smg7	99	63.186	ENSMAUG00000019484	Smg7	96	63.274	Mesocricetus_auratus
ENSPMEG00000005218	smg7	99	63.790	ENSMICG00000007145	SMG7	82	90.446	Microcebus_murinus
ENSPMEG00000005218	smg7	99	63.019	ENSMOCG00000020748	Smg7	96	62.920	Microtus_ochrogaster
ENSPMEG00000005218	smg7	99	79.133	ENSMMOG00000001524	smg7	96	79.765	Mola_mola
ENSPMEG00000005218	smg7	94	64.525	ENSMODG00000007139	SMG7	99	64.930	Monodelphis_domestica
ENSPMEG00000005218	smg7	99	82.883	ENSMALG00000000061	smg7	90	83.243	Monopterus_albus
ENSPMEG00000005218	smg7	99	63.443	MGP_CAROLIEiJ_G0014704	Smg7	96	63.265	Mus_caroli
ENSPMEG00000005218	smg7	99	63.177	ENSMUSG00000042772	Smg7	96	63.265	Mus_musculus
ENSPMEG00000005218	smg7	99	63.354	MGP_PahariEiJ_G0027940	Smg7	96	63.443	Mus_pahari
ENSPMEG00000005218	smg7	99	63.265	MGP_SPRETEiJ_G0015511	Smg7	96	63.354	Mus_spretus
ENSPMEG00000005218	smg7	98	58.870	ENSMPUG00000011732	SMG7	94	58.957	Mustela_putorius_furo
ENSPMEG00000005218	smg7	99	59.880	ENSMLUG00000015417	SMG7	96	59.966	Myotis_lucifugus
ENSPMEG00000005218	smg7	99	62.907	ENSNGAG00000009836	Smg7	97	62.467	Nannospalax_galili
ENSPMEG00000005218	smg7	98	75.479	ENSNBRG00000024343	smg7	96	75.023	Neolamprologus_brichardi
ENSPMEG00000005218	smg7	99	63.968	ENSNLEG00000018018	SMG7	96	64.146	Nomascus_leucogenys
ENSPMEG00000005218	smg7	72	65.341	ENSMEUG00000004681	SMG7	73	65.341	Notamacropus_eugenii
ENSPMEG00000005218	smg7	99	57.550	ENSOPRG00000013942	SMG7	96	57.991	Ochotona_princeps
ENSPMEG00000005218	smg7	99	63.717	ENSODEG00000010390	SMG7	96	64.071	Octodon_degus
ENSPMEG00000005218	smg7	99	82.226	ENSONIG00000000277	smg7	97	82.194	Oreochromis_niloticus
ENSPMEG00000005218	smg7	98	59.410	ENSOANG00000000994	SMG7	97	59.237	Ornithorhynchus_anatinus
ENSPMEG00000005218	smg7	99	58.919	ENSOCUG00000005887	SMG7	90	58.753	Oryctolagus_cuniculus
ENSPMEG00000005218	smg7	99	78.895	ENSORLG00000007314	smg7	97	79.438	Oryzias_latipes
ENSPMEG00000005218	smg7	99	78.986	ENSORLG00020015779	smg7	97	79.529	Oryzias_latipes_hni
ENSPMEG00000005218	smg7	99	79.438	ENSORLG00015012289	smg7	97	79.438	Oryzias_latipes_hsok
ENSPMEG00000005218	smg7	99	76.670	ENSOMEG00000002328	smg7	97	76.323	Oryzias_melastigma
ENSPMEG00000005218	smg7	99	59.199	ENSOGAG00000003107	SMG7	93	59.231	Otolemur_garnettii
ENSPMEG00000005218	smg7	98	62.196	ENSOARG00000001352	SMG7	97	62.376	Ovis_aries
ENSPMEG00000005218	smg7	99	63.968	ENSPPAG00000031619	SMG7	90	87.273	Pan_paniscus
ENSPMEG00000005218	smg7	99	63.186	ENSPPRG00000011222	SMG7	96	63.363	Panthera_pardus
ENSPMEG00000005218	smg7	99	59.367	ENSPTIG00000007242	SMG7	97	60.123	Panthera_tigris_altaica
ENSPMEG00000005218	smg7	99	63.968	ENSPTRG00000001764	SMG7	85	90.446	Pan_troglodytes
ENSPMEG00000005218	smg7	99	64.057	ENSPANG00000004520	SMG7	96	64.235	Papio_anubis
ENSPMEG00000005218	smg7	99	66.818	ENSPKIG00000007242	smg7	96	66.215	Paramormyrops_kingsleyae
ENSPMEG00000005218	smg7	98	64.484	ENSPSIG00000012201	SMG7	97	64.151	Pelodiscus_sinensis
ENSPMEG00000005218	smg7	68	48.768	ENSPMGG00000021833	smg7	87	49.934	Periophthalmus_magnuspinnatus
ENSPMEG00000005218	smg7	99	62.679	ENSPEMG00000011315	Smg7	96	62.768	Peromyscus_maniculatus_bairdii
ENSPMEG00000005218	smg7	99	64.039	ENSPCIG00000003786	SMG7	89	91.250	Phascolarctos_cinereus
ENSPMEG00000005218	smg7	99	95.304	ENSPFOG00000019219	smg7	97	95.304	Poecilia_formosa
ENSPMEG00000005218	smg7	99	99.727	ENSPLAG00000001446	smg7	97	99.727	Poecilia_latipinna
ENSPMEG00000005218	smg7	90	93.441	ENSPREG00000019039	smg7	91	92.936	Poecilia_reticulata
ENSPMEG00000005218	smg7	99	63.968	ENSPPYG00000000427	SMG7	96	64.146	Pongo_abelii
ENSPMEG00000005218	smg7	86	69.651	ENSPCAG00000008360	SMG7	86	69.651	Procavia_capensis
ENSPMEG00000005218	smg7	99	62.433	ENSPCOG00000011996	SMG7	77	90.446	Propithecus_coquereli
ENSPMEG00000005218	smg7	93	56.897	ENSPVAG00000000851	SMG7	89	57.169	Pteropus_vampyrus
ENSPMEG00000005218	smg7	99	81.883	ENSPNYG00000007643	smg7	97	81.695	Pundamilia_nyererei
ENSPMEG00000005218	smg7	99	74.150	ENSPNAG00000011374	smg7	97	74.240	Pygocentrus_nattereri
ENSPMEG00000005218	smg7	99	63.387	ENSRNOG00000027962	Smg7	99	65.019	Rattus_norvegicus
ENSPMEG00000005218	smg7	99	63.968	ENSRBIG00000036316	SMG7	96	64.146	Rhinopithecus_bieti
ENSPMEG00000005218	smg7	99	63.968	ENSRROG00000035719	SMG7	96	64.146	Rhinopithecus_roxellana
ENSPMEG00000005218	smg7	99	62.321	ENSSBOG00000023454	SMG7	88	90.683	Saimiri_boliviensis_boliviensis
ENSPMEG00000005218	smg7	99	63.854	ENSSHAG00000013147	SMG7	96	63.918	Sarcophilus_harrisii
ENSPMEG00000005218	smg7	99	70.054	ENSSFOG00015017252	smg7	97	70.054	Scleropages_formosus
ENSPMEG00000005218	smg7	99	82.023	ENSSMAG00000006067	smg7	97	80.776	Scophthalmus_maximus
ENSPMEG00000005218	smg7	65	88.430	ENSSDUG00000017543	smg7	97	84.135	Seriola_dumerili
ENSPMEG00000005218	smg7	99	64.064	ENSSPUG00000002064	SMG7	96	63.588	Sphenodon_punctatus
ENSPMEG00000005218	smg7	99	81.120	ENSSPAG00000008733	smg7	96	81.301	Stegastes_partitus
ENSPMEG00000005218	smg7	99	62.612	ENSSSCG00000015558	SMG7	96	62.701	Sus_scrofa
ENSPMEG00000005218	smg7	99	61.867	ENSTGUG00000003928	SMG7	97	63.191	Taeniopygia_guttata
ENSPMEG00000005218	smg7	99	68.846	ENSTNIG00000002802	smg7	97	67.918	Tetraodon_nigroviridis
ENSPMEG00000005218	smg7	80	65.714	ENSTBEG00000003220	SMG7	72	65.714	Tupaia_belangeri
ENSPMEG00000005218	smg7	99	60.275	ENSTTRG00000014778	SMG7	94	60.361	Tursiops_truncatus
ENSPMEG00000005218	smg7	96	60.685	ENSUAMG00000017473	SMG7	96	60.777	Ursus_americanus
ENSPMEG00000005218	smg7	96	60.685	ENSUMAG00000016389	SMG7	96	60.777	Ursus_maritimus
ENSPMEG00000005218	smg7	99	61.717	ENSVVUG00000008976	SMG7	96	61.807	Vulpes_vulpes
ENSPMEG00000005218	smg7	99	59.269	ENSXETG00000012528	smg7	97	59.111	Xenopus_tropicalis
ENSPMEG00000005218	smg7	99	97.545	ENSXMAG00000007123	smg7	97	97.545	Xiphophorus_maculatus