EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000005288 (Gene tree)
Gene ID: 106911433
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-1A-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 16200 bases
Position: chrKQ554934.1:21-16220
Accession: 106911433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000023583	MMR_HSR1	PF01926.23	2.5e-05	1	1
ENSPMEP00000023581	MMR_HSR1	PF01926.23	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000009784	-	4497	XM_014978236	ENSPMEP00000023583	202 (aa)	XP_014833722	UPI000443D2F4
ENSPMET00000009798	-	648	-	ENSPMEP00000023581	215 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000005288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000005288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000005288	-	83	42.391	ENSPMEG00000003177	rab33a	65	42.391
ENSPMEG00000005288	-	87	43.258	ENSPMEG00000019497	rab42a	82	43.258
ENSPMEG00000005288	-	88	56.425	ENSPMEG00000008020	-	90	56.425
ENSPMEG00000005288	-	85	49.711	ENSPMEG00000013085	rab18a	93	46.154
ENSPMEG00000005288	-	96	44.615	ENSPMEG00000008223	rab18b	95	44.615
ENSPMEG00000005288	-	96	38.776	ENSPMEG00000019167	rab6ba	94	38.776
ENSPMEG00000005288	-	80	40.994	ENSPMEG00000021872	rab6bb	77	40.994
ENSPMEG00000005288	-	85	40.341	ENSPMEG00000012932	si:dkey-34d22.5	76	41.420
ENSPMEG00000005288	-	83	53.571	ENSPMEG00000007917	rab11ba	58	53.571
ENSPMEG00000005288	-	96	43.878	ENSPMEG00000007238	rab5aa	90	43.564
ENSPMEG00000005288	-	100	90.594	ENSPMEG00000002054	rab1ba	100	90.594
ENSPMEG00000005288	-	82	51.205	ENSPMEG00000009701	rab30	82	51.205
ENSPMEG00000005288	-	84	49.704	ENSPMEG00000021986	rab15	79	49.704
ENSPMEG00000005288	-	98	36.232	ENSPMEG00000013734	rab9b	90	35.885
ENSPMEG00000005288	-	78	37.267	ENSPMEG00000013297	rab34b	63	37.267
ENSPMEG00000005288	-	82	35.928	ENSPMEG00000012042	si:ch73-116o1.2	86	34.637
ENSPMEG00000005288	-	57	33.607	ENSPMEG00000007064	-	63	33.607
ENSPMEG00000005288	-	59	34.167	ENSPMEG00000010573	-	85	34.167
ENSPMEG00000005288	-	84	43.353	ENSPMEG00000017161	-	71	43.353
ENSPMEG00000005288	-	82	53.614	ENSPMEG00000007842	-	76	53.614
ENSPMEG00000005288	-	98	43.069	ENSPMEG00000005491	rab25a	96	43.069
ENSPMEG00000005288	-	96	37.629	ENSPMEG00000014170	rab41	91	37.629
ENSPMEG00000005288	-	82	33.533	ENSPMEG00000020579	rhebl1	90	33.533
ENSPMEG00000005288	-	84	49.112	ENSPMEG00000001400	rab25b	81	49.112
ENSPMEG00000005288	-	90	58.791	ENSPMEG00000007165	si:dkey-16l2.16	84	58.791
ENSPMEG00000005288	-	59	34.167	ENSPMEG00000017927	RRAS2	85	34.167
ENSPMEG00000005288	-	82	32.934	ENSPMEG00000014302	rheb	90	32.934
ENSPMEG00000005288	-	83	51.479	ENSPMEG00000010417	rab12	84	45.098
ENSPMEG00000005288	-	81	37.195	ENSPMEG00000019525	KRAS	95	34.807
ENSPMEG00000005288	-	79	39.264	ENSPMEG00000021641	-	82	38.235
ENSPMEG00000005288	-	80	65.432	ENSPMEG00000021947	rab35b	80	65.432
ENSPMEG00000005288	-	69	30.496	ENSPMEG00000008907	arl3	72	30.496
ENSPMEG00000005288	-	90	33.516	ENSPMEG00000017300	rab23	98	32.178
ENSPMEG00000005288	-	81	46.626	ENSPMEG00000012614	-	89	43.564
ENSPMEG00000005288	-	81	34.756	ENSPMEG00000000572	rras	83	34.756
ENSPMEG00000005288	-	58	33.898	ENSPMEG00000017237	arl8a	61	33.898
ENSPMEG00000005288	-	58	31.933	ENSPMEG00000007028	arl4cb	59	31.933
ENSPMEG00000005288	-	57	30.833	ENSPMEG00000017081	-	70	30.833
ENSPMEG00000005288	-	71	30.345	ENSPMEG00000017082	-	70	30.216
ENSPMEG00000005288	-	84	45.614	ENSPMEG00000007976	-	80	45.614
ENSPMEG00000005288	-	85	35.593	ENSPMEG00000020891	hrasb	93	35.593
ENSPMEG00000005288	-	100	74.877	ENSPMEG00000022350	zgc:171927	98	74.877
ENSPMEG00000005288	-	99	48.309	ENSPMEG00000000804	rab11al	96	48.309
ENSPMEG00000005288	-	82	30.909	ENSPMEG00000001179	-	85	30.909
ENSPMEG00000005288	-	84	43.386	ENSPMEG00000010152	zgc:101559	78	43.386
ENSPMEG00000005288	-	78	39.264	ENSPMEG00000002086	rab34a	61	39.264
ENSPMEG00000005288	-	84	43.353	ENSPMEG00000002564	-	71	43.353
ENSPMEG00000005288	-	84	45.614	ENSPMEG00000004946	RAB39B	80	45.614
ENSPMEG00000005288	-	97	45.128	ENSPMEG00000006424	-	90	45.128
ENSPMEG00000005288	-	99	42.254	ENSPMEG00000012205	rab4a	100	42.254
ENSPMEG00000005288	-	77	36.538	ENSPMEG00000004703	rabl2	69	36.538
ENSPMEG00000005288	-	80	36.970	ENSPMEG00000019159	si:dkey-13a21.4	80	36.970
ENSPMEG00000005288	-	88	56.425	ENSPMEG00000022988	-	90	56.425
ENSPMEG00000005288	-	72	46.358	ENSPMEG00000019646	-	63	46.358
ENSPMEG00000005288	-	58	32.231	ENSPMEG00000009877	arl2	64	31.746
ENSPMEG00000005288	-	61	31.852	ENSPMEG00000013451	arfrp1	69	30.496
ENSPMEG00000005288	-	96	44.615	ENSPMEG00000011336	rab5c	90	44.279
ENSPMEG00000005288	-	100	91.626	ENSPMEG00000003046	rab1ab	100	91.626
ENSPMEG00000005288	-	96	39.175	ENSPMEG00000003369	rab6a	93	39.175
ENSPMEG00000005288	-	99	49.515	ENSPMEG00000007932	rab11a	96	49.515
ENSPMEG00000005288	-	99	34.529	ENSPMEG00000010190	RAB9A	99	34.529
ENSPMEG00000005288	-	98	32.394	ENSPMEG00000021807	RAB29	99	32.394
ENSPMEG00000005288	-	88	32.418	ENSPMEG00000011210	si:cabz01085950.1	88	32.418
ENSPMEG00000005288	-	61	34.127	ENSPMEG00000021972	arl4d	61	34.127
ENSPMEG00000005288	-	57	47.009	ENSPMEG00000015292	rab36	65	47.009
ENSPMEG00000005288	-	79	39.264	ENSPMEG00000004392	RAB7A	82	38.235
ENSPMEG00000005288	-	97	46.154	ENSPMEG00000010857	rab14	90	46.154
ENSPMEG00000005288	-	86	30.729	ENSPMEG00000018145	rasl11a	75	30.729
ENSPMEG00000005288	-	55	35.714	ENSPMEG00000018380	rras2	67	35.714
ENSPMEG00000005288	-	97	37.073	ENSPMEG00000023735	rab9a	97	37.073
ENSPMEG00000005288	-	85	43.243	ENSPMEG00000022709	rab33ba	76	43.243
ENSPMEG00000005288	-	96	38.144	ENSPMEG00000003743	rab22a	97	38.144
ENSPMEG00000005288	-	99	46.890	ENSPMEG00000012389	rab11bb	96	46.890
ENSPMEG00000005288	-	81	48.466	ENSPMEG00000000408	RAB15	78	48.466
ENSPMEG00000005288	-	98	36.232	ENSPMEG00000024399	rab9b	90	35.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000005288	-	100	94.059	ENSG00000138069	RAB1A	98	100.000	Homo_sapiens
ENSPMEG00000005288	-	100	97.030	ENSAPOG00000008143	-	100	97.030	Acanthochromis_polyacanthus
ENSPMEG00000005288	-	100	94.059	ENSAMEG00000001127	RAB1A	99	94.059	Ailuropoda_melanoleuca
ENSPMEG00000005288	-	100	97.030	ENSAOCG00000020606	-	100	97.030	Amphiprion_ocellaris
ENSPMEG00000005288	-	100	97.030	ENSAPEG00000022488	-	100	97.030	Amphiprion_percula
ENSPMEG00000005288	-	100	94.059	ENSANAG00000020929	RAB1A	99	94.059	Aotus_nancymaae
ENSPMEG00000005288	-	100	97.525	ENSACLG00000003326	-	100	97.525	Astatotilapia_calliptera
ENSPMEG00000005288	-	100	92.079	ENSAMXG00000034850	-	100	92.079	Astyanax_mexicanus
ENSPMEG00000005288	-	100	94.059	ENSBTAG00000016720	RAB1A	99	94.059	Bos_taurus
ENSPMEG00000005288	-	100	94.059	ENSCJAG00000046275	RAB1A	99	94.059	Callithrix_jacchus
ENSPMEG00000005288	-	100	94.059	ENSCAFG00000003187	RAB1A	99	94.059	Canis_familiaris
ENSPMEG00000005288	-	100	94.059	ENSCAFG00020026971	RAB1A	99	94.059	Canis_lupus_dingo
ENSPMEG00000005288	-	98	93.909	ENSCHIG00000014060	RAB1A	100	91.220	Capra_hircus
ENSPMEG00000005288	-	100	92.574	ENSTSYG00000005996	RAB1A	100	93.909	Carlito_syrichta
ENSPMEG00000005288	-	100	94.059	ENSCPOG00000015437	RAB1A	99	94.059	Cavia_porcellus
ENSPMEG00000005288	-	100	94.059	ENSCCAG00000021869	RAB1A	99	94.059	Cebus_capucinus
ENSPMEG00000005288	-	100	94.059	ENSCATG00000030853	RAB1A	99	94.059	Cercocebus_atys
ENSPMEG00000005288	-	100	94.059	ENSCLAG00000014766	RAB1A	99	94.059	Chinchilla_lanigera
ENSPMEG00000005288	-	100	94.554	ENSCPBG00000013243	RAB1A	99	94.554	Chrysemys_picta_bellii
ENSPMEG00000005288	-	100	92.079	ENSCANG00000035916	RAB1A	99	92.079	Colobus_angolensis_palliatus
ENSPMEG00000005288	-	100	94.059	ENSCGRG00001012691	-	99	94.059	Cricetulus_griseus_chok1gshd
ENSPMEG00000005288	-	100	94.059	ENSCGRG00000008456	-	99	94.059	Cricetulus_griseus_crigri
ENSPMEG00000005288	-	100	94.059	ENSDNOG00000018236	RAB1A	99	94.059	Dasypus_novemcinctus
ENSPMEG00000005288	-	100	94.059	ENSDORG00000028628	-	99	94.059	Dipodomys_ordii
ENSPMEG00000005288	-	100	85.222	FBgn0285937	Rab1	99	85.222	Drosophila_melanogaster
ENSPMEG00000005288	-	100	94.059	ENSETEG00000002205	RAB1A	100	94.059	Echinops_telfairi
ENSPMEG00000005288	-	100	94.059	ENSEASG00005007298	RAB1A	99	94.059	Equus_asinus_asinus
ENSPMEG00000005288	-	100	94.059	ENSECAG00000009926	RAB1A	99	94.059	Equus_caballus
ENSPMEG00000005288	-	100	94.059	ENSEEUG00000011721	RAB1A	100	94.059	Erinaceus_europaeus
ENSPMEG00000005288	-	100	93.627	ENSELUG00000012166	RAB1A	96	93.627	Esox_lucius
ENSPMEG00000005288	-	100	94.059	ENSFCAG00000002536	RAB1A	99	94.059	Felis_catus
ENSPMEG00000005288	-	100	92.574	ENSFALG00000013624	RAB1A	99	92.574	Ficedula_albicollis
ENSPMEG00000005288	-	100	94.059	ENSFDAG00000019505	-	99	94.059	Fukomys_damarensis
ENSPMEG00000005288	-	100	97.030	ENSFHEG00000014414	-	100	97.030	Fundulus_heteroclitus
ENSPMEG00000005288	-	100	94.554	ENSGALG00000031582	RAB1A	99	94.554	Gallus_gallus
ENSPMEG00000005288	-	100	99.505	ENSGAFG00000000918	-	100	99.505	Gambusia_affinis
ENSPMEG00000005288	-	100	94.554	ENSGAGG00000006802	RAB1A	99	94.554	Gopherus_agassizii
ENSPMEG00000005288	-	100	94.059	ENSGGOG00000026603	RAB1A	99	94.059	Gorilla_gorilla
ENSPMEG00000005288	-	100	94.059	ENSHGLG00000013585	RAB1A	99	94.059	Heterocephalus_glaber_female
ENSPMEG00000005288	-	100	92.574	ENSHGLG00100007994	RAB1A	99	92.574	Heterocephalus_glaber_male
ENSPMEG00000005288	-	100	94.059	ENSSTOG00000020693	-	99	94.059	Ictidomys_tridecemlineatus
ENSPMEG00000005288	-	98	93.909	ENSJJAG00000014396	Rab1a	100	93.909	Jaculus_jaculus
ENSPMEG00000005288	-	98	96.447	ENSKMAG00000014038	-	93	96.447	Kryptolebias_marmoratus
ENSPMEG00000005288	-	100	96.040	ENSLBEG00000028426	RAB1A	100	96.040	Labrus_bergylta
ENSPMEG00000005288	-	100	94.059	ENSLACG00000012869	RAB1A	99	94.059	Latimeria_chalumnae
ENSPMEG00000005288	-	100	94.059	ENSLAFG00000016666	RAB1A	99	94.059	Loxodonta_africana
ENSPMEG00000005288	-	100	94.059	ENSMFAG00000046246	RAB1A	99	94.059	Macaca_fascicularis
ENSPMEG00000005288	-	98	93.909	ENSMMUG00000021721	RAB1A	91	93.909	Macaca_mulatta
ENSPMEG00000005288	-	95	95.288	ENSMNEG00000028414	-	96	95.288	Macaca_nemestrina
ENSPMEG00000005288	-	100	94.059	ENSMLEG00000042535	RAB1A	99	94.059	Mandrillus_leucophaeus
ENSPMEG00000005288	-	100	97.525	ENSMZEG00005013959	-	100	97.525	Maylandia_zebra
ENSPMEG00000005288	-	98	94.416	ENSMGAG00000004611	RAB1A	98	94.416	Meleagris_gallopavo
ENSPMEG00000005288	-	100	93.564	ENSMAUG00000012156	Rab1a	99	93.564	Mesocricetus_auratus
ENSPMEG00000005288	-	100	94.059	ENSMICG00000012587	RAB1A	99	94.059	Microcebus_murinus
ENSPMEG00000005288	-	100	93.564	ENSMOCG00000017022	Rab1a	99	93.564	Microtus_ochrogaster
ENSPMEG00000005288	-	100	96.040	ENSMMOG00000018709	RAB1A	100	96.040	Mola_mola
ENSPMEG00000005288	-	100	94.554	ENSMODG00000003340	RAB1A	99	94.554	Monodelphis_domestica
ENSPMEG00000005288	-	100	94.059	MGP_CAROLIEiJ_G0016115	Rab1a	99	94.059	Mus_caroli
ENSPMEG00000005288	-	100	94.059	ENSMUSG00000020149	Rab1a	100	94.059	Mus_musculus
ENSPMEG00000005288	-	100	94.059	MGP_PahariEiJ_G0016776	Rab1a	99	94.059	Mus_pahari
ENSPMEG00000005288	-	100	94.059	MGP_SPRETEiJ_G0016958	Rab1a	100	94.059	Mus_spretus
ENSPMEG00000005288	-	100	94.059	ENSMPUG00000006139	RAB1A	80	94.059	Mustela_putorius_furo
ENSPMEG00000005288	-	100	94.059	ENSMLUG00000009489	RAB1A	99	94.059	Myotis_lucifugus
ENSPMEG00000005288	-	100	94.059	ENSNGAG00000005838	Rab1a	99	94.059	Nannospalax_galili
ENSPMEG00000005288	-	100	97.525	ENSNBRG00000020492	-	100	97.525	Neolamprologus_brichardi
ENSPMEG00000005288	-	98	93.909	ENSOPRG00000006595	RAB1A	100	93.909	Ochotona_princeps
ENSPMEG00000005288	-	94	93.651	ENSODEG00000011248	-	96	93.750	Octodon_degus
ENSPMEG00000005288	-	100	95.545	ENSONIG00000006819	-	99	95.545	Oreochromis_niloticus
ENSPMEG00000005288	-	100	94.554	ENSOANG00000012438	RAB1A	99	94.554	Ornithorhynchus_anatinus
ENSPMEG00000005288	-	100	94.059	ENSOCUG00000017003	RAB1A	99	94.059	Oryctolagus_cuniculus
ENSPMEG00000005288	-	100	94.059	ENSOGAG00000026181	RAB1A	99	94.059	Otolemur_garnettii
ENSPMEG00000005288	-	98	93.909	ENSOARG00000019997	RAB1A	97	93.909	Ovis_aries
ENSPMEG00000005288	-	100	94.059	ENSPPAG00000030253	RAB1A	100	94.059	Pan_paniscus
ENSPMEG00000005288	-	100	94.059	ENSPPRG00000025077	RAB1A	99	94.059	Panthera_pardus
ENSPMEG00000005288	-	98	93.909	ENSPTIG00000013471	RAB1A	97	93.909	Panthera_tigris_altaica
ENSPMEG00000005288	-	100	94.059	ENSPTRG00000011989	RAB1A	99	94.059	Pan_troglodytes
ENSPMEG00000005288	-	100	94.059	ENSPANG00000010485	RAB1A	99	94.059	Papio_anubis
ENSPMEG00000005288	-	100	92.079	ENSPSIG00000008028	RAB1A	99	92.079	Pelodiscus_sinensis
ENSPMEG00000005288	-	100	97.030	ENSPMGG00000021015	-	99	97.030	Periophthalmus_magnuspinnatus
ENSPMEG00000005288	-	100	94.059	ENSPEMG00000009340	Rab1a	99	94.059	Peromyscus_maniculatus_bairdii
ENSPMEG00000005288	-	100	94.554	ENSPCIG00000023212	RAB1A	99	94.554	Phascolarctos_cinereus
ENSPMEG00000005288	-	100	100.000	ENSPFOG00000000498	-	98	100.000	Poecilia_formosa
ENSPMEG00000005288	-	100	100.000	ENSPLAG00000015592	-	100	100.000	Poecilia_latipinna
ENSPMEG00000005288	-	100	94.059	ENSPPYG00000012360	RAB1A	99	94.059	Pongo_abelii
ENSPMEG00000005288	-	100	94.059	ENSPCOG00000017244	RAB1A	99	94.059	Propithecus_coquereli
ENSPMEG00000005288	-	100	97.525	ENSPNYG00000015841	-	100	97.525	Pundamilia_nyererei
ENSPMEG00000005288	-	100	94.059	ENSRNOG00000004992	Rab1a	99	94.059	Rattus_norvegicus
ENSPMEG00000005288	-	100	94.059	ENSSBOG00000023732	RAB1A	99	94.059	Saimiri_boliviensis_boliviensis
ENSPMEG00000005288	-	98	94.416	ENSSHAG00000003597	RAB1A	98	93.035	Sarcophilus_harrisii
ENSPMEG00000005288	-	100	96.535	ENSSMAG00000021049	-	100	96.535	Scophthalmus_maximus
ENSPMEG00000005288	-	100	97.525	ENSSDUG00000022535	RAB1A	100	97.525	Seriola_dumerili
ENSPMEG00000005288	-	100	94.554	ENSSPUG00000012822	RAB1A	99	94.554	Sphenodon_punctatus
ENSPMEG00000005288	-	100	97.030	ENSSPAG00000012564	-	100	97.030	Stegastes_partitus
ENSPMEG00000005288	-	100	94.059	ENSSSCG00000008359	RAB1A	100	93.909	Sus_scrofa
ENSPMEG00000005288	-	100	92.574	ENSTGUG00000002328	RAB1A	99	92.574	Taeniopygia_guttata
ENSPMEG00000005288	-	100	96.535	ENSTRUG00000024994	RAB1A	100	96.535	Takifugu_rubripes
ENSPMEG00000005288	-	98	93.909	ENSUMAG00000021038	RAB1A	99	93.909	Ursus_maritimus
ENSPMEG00000005288	-	98	93.434	ENSVPAG00000005640	RAB1A	99	93.434	Vicugna_pacos
ENSPMEG00000005288	-	100	94.059	ENSVVUG00000027588	RAB1A	99	94.059	Vulpes_vulpes
ENSPMEG00000005288	-	100	99.505	ENSXMAG00000015776	-	100	99.505	Xiphophorus_maculatus