EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000005330 (Gene tree)
Gene ID: 106908204
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain-containing protein 2-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 24162 bases
Position: chrKQ553721.1:46288-70449
Accession: 106908204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000004036	R3H	PF01424.22	9.1e-11	1	1
ENSPMEP00000004052	R3H	PF01424.22	1e-10	1	1
ENSPMEP00000004060	R3H	PF01424.22	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000009830	-	5045	XM_014974227	ENSPMEP00000004060	1055 (aa)	XP_014829713	UPI000444116E
ENSPMET00000009844	-	4946	XM_014974233	ENSPMEP00000004052	1022 (aa)	XP_014829719	-
ENSPMET00000009868	-	2775	-	ENSPMEP00000004036	924 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000005330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000005330's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000005330	r3hdm2	73	60.339	ENSPMEG00000023947	r3hdm1	62	63.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000005330	r3hdm2	99	66.738	ENSG00000179912	R3HDM2	89	81.600	Homo_sapiens
ENSPMEG00000005330	r3hdm2	50	38.919	ENSAPOG00000021873	-	73	39.372	Acanthochromis_polyacanthus
ENSPMEG00000005330	r3hdm2	100	91.481	ENSAPOG00000020341	r3hdm2	100	92.435	Acanthochromis_polyacanthus
ENSPMEG00000005330	r3hdm2	95	65.541	ENSAMEG00000004812	R3HDM2	99	62.878	Ailuropoda_melanoleuca
ENSPMEG00000005330	r3hdm2	99	91.276	ENSACIG00000016146	r3hdm2	98	89.749	Amphilophus_citrinellus
ENSPMEG00000005330	r3hdm2	100	91.839	ENSAOCG00000023694	r3hdm2	100	92.763	Amphiprion_ocellaris
ENSPMEG00000005330	r3hdm2	100	91.932	ENSAPEG00000008851	r3hdm2	100	92.857	Amphiprion_percula
ENSPMEG00000005330	r3hdm2	100	89.952	ENSATEG00000025024	r3hdm2	100	91.779	Anabas_testudineus
ENSPMEG00000005330	r3hdm2	99	56.035	ENSAPLG00000004298	R3HDM2	92	67.062	Anas_platyrhynchos
ENSPMEG00000005330	r3hdm2	99	62.654	ENSACAG00000006388	R3HDM2	99	61.611	Anolis_carolinensis
ENSPMEG00000005330	r3hdm2	99	61.273	ENSANAG00000031310	-	98	61.738	Aotus_nancymaae
ENSPMEG00000005330	r3hdm2	99	66.631	ENSANAG00000025397	-	99	64.820	Aotus_nancymaae
ENSPMEG00000005330	r3hdm2	100	92.105	ENSACLG00000019106	r3hdm2	100	92.467	Astatotilapia_calliptera
ENSPMEG00000005330	r3hdm2	99	70.619	ENSAMXG00000017180	r3hdm2	99	72.670	Astyanax_mexicanus
ENSPMEG00000005330	r3hdm2	99	64.431	ENSBTAG00000018361	R3HDM2	99	64.431	Bos_taurus
ENSPMEG00000005330	r3hdm2	99	66.277	ENSCJAG00000007365	R3HDM2	99	64.723	Callithrix_jacchus
ENSPMEG00000005330	r3hdm2	99	64.124	ENSCAFG00000000215	R3HDM2	99	64.541	Canis_familiaris
ENSPMEG00000005330	r3hdm2	99	66.417	ENSCAFG00020023713	R3HDM2	99	64.632	Canis_lupus_dingo
ENSPMEG00000005330	r3hdm2	99	64.503	ENSCHIG00000014022	R3HDM2	99	64.820	Capra_hircus
ENSPMEG00000005330	r3hdm2	99	65.882	ENSTSYG00000001449	R3HDM2	99	64.626	Carlito_syrichta
ENSPMEG00000005330	r3hdm2	99	65.789	ENSCPOG00000009217	R3HDM2	99	63.636	Cavia_porcellus
ENSPMEG00000005330	r3hdm2	86	67.282	ENSCCAG00000026083	R3HDM2	99	65.854	Cebus_capucinus
ENSPMEG00000005330	r3hdm2	99	66.524	ENSCATG00000036929	R3HDM2	99	64.723	Cercocebus_atys
ENSPMEG00000005330	r3hdm2	99	65.728	ENSCLAG00000011997	R3HDM2	99	65.038	Chinchilla_lanigera
ENSPMEG00000005330	r3hdm2	99	65.262	ENSCSAG00000004911	R3HDM2	99	64.789	Chlorocebus_sabaeus
ENSPMEG00000005330	r3hdm2	73	62.227	ENSCHOG00000005636	R3HDM2	89	64.881	Choloepus_hoffmanni
ENSPMEG00000005330	r3hdm2	99	61.462	ENSCPBG00000013922	R3HDM2	99	62.282	Chrysemys_picta_bellii
ENSPMEG00000005330	r3hdm2	99	65.739	ENSCANG00000043807	R3HDM2	99	64.529	Colobus_angolensis_palliatus
ENSPMEG00000005330	r3hdm2	99	63.346	ENSCGRG00001017324	R3hdm2	99	62.369	Cricetulus_griseus_chok1gshd
ENSPMEG00000005330	r3hdm2	99	63.261	ENSCGRG00000003862	R3hdm2	99	62.315	Cricetulus_griseus_crigri
ENSPMEG00000005330	r3hdm2	100	89.717	ENSCSEG00000010925	r3hdm2	99	90.647	Cynoglossus_semilaevis
ENSPMEG00000005330	r3hdm2	100	96.682	ENSCVAG00000009058	r3hdm2	100	96.682	Cyprinodon_variegatus
ENSPMEG00000005330	r3hdm2	99	70.155	ENSDARG00000102610	r3hdm2	99	74.794	Danio_rerio
ENSPMEG00000005330	r3hdm2	99	64.332	ENSDNOG00000015033	R3HDM2	100	65.414	Dasypus_novemcinctus
ENSPMEG00000005330	r3hdm2	99	63.466	ENSDORG00000011462	R3hdm2	98	64.428	Dipodomys_ordii
ENSPMEG00000005330	r3hdm2	99	64.153	ENSEASG00005007091	R3HDM2	99	65.005	Equus_asinus_asinus
ENSPMEG00000005330	r3hdm2	99	64.607	ENSECAG00000003157	R3HDM2	99	64.911	Equus_caballus
ENSPMEG00000005330	r3hdm2	100	78.617	ENSELUG00000015969	r3hdm2	100	77.880	Esox_lucius
ENSPMEG00000005330	r3hdm2	99	66.096	ENSFCAG00000000192	R3HDM2	99	61.680	Felis_catus
ENSPMEG00000005330	r3hdm2	80	63.182	ENSFALG00000000255	R3HDM2	99	58.855	Ficedula_albicollis
ENSPMEG00000005330	r3hdm2	99	63.646	ENSFDAG00000019385	R3HDM2	99	64.165	Fukomys_damarensis
ENSPMEG00000005330	r3hdm2	100	97.652	ENSFHEG00000016484	r3hdm2	100	97.652	Fundulus_heteroclitus
ENSPMEG00000005330	r3hdm2	95	80.626	ENSGMOG00000007961	r3hdm2	100	80.724	Gadus_morhua
ENSPMEG00000005330	r3hdm2	99	64.592	ENSGALG00000043736	R3HDM2	99	63.076	Gallus_gallus
ENSPMEG00000005330	r3hdm2	100	99.147	ENSGAFG00000013887	r3hdm2	100	99.025	Gambusia_affinis
ENSPMEG00000005330	r3hdm2	95	87.122	ENSGACG00000006442	r3hdm2	100	88.098	Gasterosteus_aculeatus
ENSPMEG00000005330	r3hdm2	99	61.771	ENSGAGG00000017797	R3HDM2	99	61.290	Gopherus_agassizii
ENSPMEG00000005330	r3hdm2	99	66.524	ENSGGOG00000015007	R3HDM2	99	64.723	Gorilla_gorilla
ENSPMEG00000005330	r3hdm2	94	59.842	ENSHGLG00000010421	-	97	58.894	Heterocephalus_glaber_female
ENSPMEG00000005330	r3hdm2	99	65.132	ENSHGLG00000010434	-	99	64.252	Heterocephalus_glaber_female
ENSPMEG00000005330	r3hdm2	99	65.038	ENSHGLG00100004183	-	99	64.158	Heterocephalus_glaber_male
ENSPMEG00000005330	r3hdm2	97	58.462	ENSHGLG00100018871	-	96	58.193	Heterocephalus_glaber_male
ENSPMEG00000005330	r3hdm2	100	86.936	ENSHCOG00000001142	r3hdm2	97	87.204	Hippocampus_comes
ENSPMEG00000005330	r3hdm2	100	76.287	ENSIPUG00000023873	r3hdm2	100	76.654	Ictalurus_punctatus
ENSPMEG00000005330	r3hdm2	99	64.000	ENSSTOG00000013424	R3HDM2	99	60.777	Ictidomys_tridecemlineatus
ENSPMEG00000005330	r3hdm2	99	64.574	ENSJJAG00000010001	R3hdm2	99	64.353	Jaculus_jaculus
ENSPMEG00000005330	r3hdm2	51	36.163	ENSKMAG00000004052	-	70	38.171	Kryptolebias_marmoratus
ENSPMEG00000005330	r3hdm2	100	92.293	ENSKMAG00000012695	r3hdm2	97	92.453	Kryptolebias_marmoratus
ENSPMEG00000005330	r3hdm2	50	38.380	ENSLBEG00000002779	-	52	47.006	Labrus_bergylta
ENSPMEG00000005330	r3hdm2	100	90.660	ENSLBEG00000013115	r3hdm2	96	90.368	Labrus_bergylta
ENSPMEG00000005330	r3hdm2	100	59.922	ENSLACG00000019064	r3hdm2	100	64.182	Latimeria_chalumnae
ENSPMEG00000005330	r3hdm2	99	74.272	ENSLOCG00000005976	r3hdm2	99	73.786	Lepisosteus_oculatus
ENSPMEG00000005330	r3hdm2	99	64.067	ENSLAFG00000006510	R3HDM2	99	64.498	Loxodonta_africana
ENSPMEG00000005330	r3hdm2	99	66.524	ENSMFAG00000036385	R3HDM2	99	64.723	Macaca_fascicularis
ENSPMEG00000005330	r3hdm2	99	66.524	ENSMMUG00000021789	R3HDM2	99	64.723	Macaca_mulatta
ENSPMEG00000005330	r3hdm2	99	66.667	ENSMNEG00000025314	R3HDM2	99	64.723	Macaca_nemestrina
ENSPMEG00000005330	r3hdm2	99	66.631	ENSMLEG00000028915	R3HDM2	99	64.820	Mandrillus_leucophaeus
ENSPMEG00000005330	r3hdm2	100	92.257	ENSMAMG00000009793	r3hdm2	100	92.185	Mastacembelus_armatus
ENSPMEG00000005330	r3hdm2	100	91.541	ENSMZEG00005007319	r3hdm2	100	91.902	Maylandia_zebra
ENSPMEG00000005330	r3hdm2	99	66.241	ENSMICG00000012389	R3HDM2	99	64.341	Microcebus_murinus
ENSPMEG00000005330	r3hdm2	99	64.064	ENSMOCG00000014425	R3hdm2	99	63.261	Microtus_ochrogaster
ENSPMEG00000005330	r3hdm2	100	85.896	ENSMMOG00000007448	r3hdm2	99	85.472	Mola_mola
ENSPMEG00000005330	r3hdm2	95	79.072	ENSMALG00000010211	r3hdm2	98	86.572	Monopterus_albus
ENSPMEG00000005330	r3hdm2	99	63.494	MGP_CAROLIEiJ_G0015896	R3hdm2	99	63.816	Mus_caroli
ENSPMEG00000005330	r3hdm2	99	64.507	ENSMUSG00000025404	R3hdm2	99	64.064	Mus_musculus
ENSPMEG00000005330	r3hdm2	99	63.223	MGP_PahariEiJ_G0031189	R3hdm2	99	64.064	Mus_pahari
ENSPMEG00000005330	r3hdm2	99	64.480	MGP_SPRETEiJ_G0016722	R3hdm2	99	63.756	Mus_spretus
ENSPMEG00000005330	r3hdm2	97	62.817	ENSMPUG00000001818	R3HDM2	96	62.769	Mustela_putorius_furo
ENSPMEG00000005330	r3hdm2	99	63.401	ENSMLUG00000004980	R3HDM2	99	63.460	Myotis_lucifugus
ENSPMEG00000005330	r3hdm2	99	64.513	ENSNGAG00000018800	R3hdm2	99	64.817	Nannospalax_galili
ENSPMEG00000005330	r3hdm2	100	91.234	ENSNBRG00000004483	r3hdm2	100	91.017	Neolamprologus_brichardi
ENSPMEG00000005330	r3hdm2	99	66.738	ENSNLEG00000017351	R3HDM2	99	64.917	Nomascus_leucogenys
ENSPMEG00000005330	r3hdm2	99	54.940	ENSMEUG00000008588	R3HDM2	99	54.663	Notamacropus_eugenii
ENSPMEG00000005330	r3hdm2	99	61.490	ENSOPRG00000013670	R3HDM2	99	58.155	Ochotona_princeps
ENSPMEG00000005330	r3hdm2	100	90.714	ENSONIG00000005075	r3hdm2	100	90.616	Oreochromis_niloticus
ENSPMEG00000005330	r3hdm2	99	62.949	ENSOCUG00000013258	R3HDM2	99	63.192	Oryctolagus_cuniculus
ENSPMEG00000005330	r3hdm2	100	90.313	ENSORLG00000005502	r3hdm2	100	88.630	Oryzias_latipes
ENSPMEG00000005330	r3hdm2	100	90.521	ENSORLG00020017069	r3hdm2	100	90.806	Oryzias_latipes_hni
ENSPMEG00000005330	r3hdm2	100	90.616	ENSORLG00015012735	r3hdm2	100	90.900	Oryzias_latipes_hsok
ENSPMEG00000005330	r3hdm2	99	87.338	ENSOMEG00000018079	r3hdm2	99	82.583	Oryzias_melastigma
ENSPMEG00000005330	r3hdm2	99	62.570	ENSOGAG00000012055	R3HDM2	99	62.160	Otolemur_garnettii
ENSPMEG00000005330	r3hdm2	96	57.457	ENSOGAG00000027966	-	99	56.942	Otolemur_garnettii
ENSPMEG00000005330	r3hdm2	99	64.031	ENSOARG00000006929	R3HDM2	99	64.341	Ovis_aries
ENSPMEG00000005330	r3hdm2	99	66.738	ENSPPAG00000034395	R3HDM2	99	64.917	Pan_paniscus
ENSPMEG00000005330	r3hdm2	99	66.096	ENSPPRG00000009240	R3HDM2	99	63.610	Panthera_pardus
ENSPMEG00000005330	r3hdm2	99	66.096	ENSPTIG00000008752	R3HDM2	99	63.610	Panthera_tigris_altaica
ENSPMEG00000005330	r3hdm2	99	66.631	ENSPTRG00000046457	R3HDM2	99	64.820	Pan_troglodytes
ENSPMEG00000005330	r3hdm2	99	66.631	ENSPANG00000024002	R3HDM2	97	66.905	Papio_anubis
ENSPMEG00000005330	r3hdm2	100	80.320	ENSPKIG00000003171	r3hdm2	100	79.567	Paramormyrops_kingsleyae
ENSPMEG00000005330	r3hdm2	63	56.241	ENSPSIG00000006954	R3HDM2	99	54.407	Pelodiscus_sinensis
ENSPMEG00000005330	r3hdm2	99	87.677	ENSPMGG00000007061	r3hdm2	99	87.241	Periophthalmus_magnuspinnatus
ENSPMEG00000005330	r3hdm2	99	64.038	ENSPEMG00000015964	R3hdm2	99	63.594	Peromyscus_maniculatus_bairdii
ENSPMEG00000005330	r3hdm2	99	63.589	ENSPCIG00000023841	R3HDM2	99	63.725	Phascolarctos_cinereus
ENSPMEG00000005330	r3hdm2	99	83.988	ENSPFOG00000006077	r3hdm2	98	86.819	Poecilia_formosa
ENSPMEG00000005330	r3hdm2	100	100.000	ENSPLAG00000002971	r3hdm2	100	100.000	Poecilia_latipinna
ENSPMEG00000005330	r3hdm2	100	99.431	ENSPREG00000008424	r3hdm2	100	99.431	Poecilia_reticulata
ENSPMEG00000005330	r3hdm2	97	62.151	ENSPPYG00000004685	R3HDM2	80	59.623	Pongo_abelii
ENSPMEG00000005330	r3hdm2	89	76.619	ENSPCAG00000014642	R3HDM2	90	80.303	Procavia_capensis
ENSPMEG00000005330	r3hdm2	99	66.096	ENSPCOG00000013201	R3HDM2	99	64.529	Propithecus_coquereli
ENSPMEG00000005330	r3hdm2	99	63.401	ENSPVAG00000003967	R3HDM2	99	63.552	Pteropus_vampyrus
ENSPMEG00000005330	r3hdm2	99	82.341	ENSPNYG00000013479	r3hdm2	100	86.321	Pundamilia_nyererei
ENSPMEG00000005330	r3hdm2	100	75.184	ENSPNAG00000017473	r3hdm2	100	76.930	Pygocentrus_nattereri
ENSPMEG00000005330	r3hdm2	99	62.642	ENSRNOG00000007801	R3hdm2	99	62.816	Rattus_norvegicus
ENSPMEG00000005330	r3hdm2	99	63.265	ENSRBIG00000037403	R3HDM2	99	63.071	Rhinopithecus_bieti
ENSPMEG00000005330	r3hdm2	99	66.631	ENSRROG00000022271	R3HDM2	99	64.820	Rhinopithecus_roxellana
ENSPMEG00000005330	r3hdm2	99	66.170	ENSSBOG00000023547	R3HDM2	99	64.723	Saimiri_boliviensis_boliviensis
ENSPMEG00000005330	r3hdm2	99	61.773	ENSSHAG00000003511	R3HDM2	99	64.978	Sarcophilus_harrisii
ENSPMEG00000005330	r3hdm2	99	76.225	ENSSFOG00015011219	r3hdm2	99	78.131	Scleropages_formosus
ENSPMEG00000005330	r3hdm2	100	91.296	ENSSMAG00000012073	r3hdm2	100	91.098	Scophthalmus_maximus
ENSPMEG00000005330	r3hdm2	100	91.989	ENSSDUG00000019269	r3hdm2	100	91.823	Seriola_dumerili
ENSPMEG00000005330	r3hdm2	100	91.879	ENSSLDG00000005252	r3hdm2	100	91.902	Seriola_lalandi_dorsalis
ENSPMEG00000005330	r3hdm2	94	60.276	ENSSARG00000003958	R3HDM2	80	69.737	Sorex_araneus
ENSPMEG00000005330	r3hdm2	99	61.169	ENSSPUG00000014132	R3HDM2	99	59.849	Sphenodon_punctatus
ENSPMEG00000005330	r3hdm2	100	91.917	ENSSPAG00000022594	r3hdm2	100	92.575	Stegastes_partitus
ENSPMEG00000005330	r3hdm2	99	66.170	ENSSSCG00000026498	R3HDM2	100	64.558	Sus_scrofa
ENSPMEG00000005330	r3hdm2	72	62.056	ENSTGUG00000015881	R3HDM2	99	60.000	Taeniopygia_guttata
ENSPMEG00000005330	r3hdm2	100	89.622	ENSTRUG00000015075	r3hdm2	98	89.189	Takifugu_rubripes
ENSPMEG00000005330	r3hdm2	92	87.637	ENSTNIG00000007057	r3hdm2	90	90.385	Tetraodon_nigroviridis
ENSPMEG00000005330	r3hdm2	82	64.626	ENSTBEG00000015967	R3HDM2	78	64.286	Tupaia_belangeri
ENSPMEG00000005330	r3hdm2	92	66.359	ENSTTRG00000013082	R3HDM2	94	61.702	Tursiops_truncatus
ENSPMEG00000005330	r3hdm2	99	63.909	ENSUAMG00000020913	R3HDM2	99	64.206	Ursus_americanus
ENSPMEG00000005330	r3hdm2	96	65.410	ENSUMAG00000019179	R3HDM2	96	64.486	Ursus_maritimus
ENSPMEG00000005330	r3hdm2	89	76.066	ENSVPAG00000008656	R3HDM2	87	80.505	Vicugna_pacos
ENSPMEG00000005330	r3hdm2	93	66.768	ENSVVUG00000018014	R3HDM2	95	63.923	Vulpes_vulpes
ENSPMEG00000005330	r3hdm2	99	62.281	ENSXETG00000017153	r3hdm2	99	61.014	Xenopus_tropicalis
ENSPMEG00000005330	r3hdm2	92	99.176	ENSXCOG00000013882	r3hdm2	100	99.176	Xiphophorus_couchianus
ENSPMEG00000005330	r3hdm2	100	99.242	ENSXMAG00000017978	r3hdm2	100	99.176	Xiphophorus_maculatus