EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000005347 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171929
Alias: -
Full Name: zgc:171929
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 6289 bases
Position: chrKQ554537.1:2042-8330
Accession: ZDB-GENE-070820-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000023631	zf-C2H2	PF00096.26	9.3e-17	1	3
ENSPMEP00000023631	zf-C2H2	PF00096.26	9.3e-17	2	3
ENSPMEP00000023631	zf-C2H2	PF00096.26	9.3e-17	3	3
ENSPMEP00000023631	zf-met	PF12874.7	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000009697	-	606	-	ENSPMEP00000023631	201 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000005347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000005347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000005347	zgc:171929	86	40.650	ENSPMEG00000016458	-	71	40.650
ENSPMEG00000005347	zgc:171929	61	37.662	ENSPMEG00000023059	-	62	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000005347	zgc:171929	96	80.412	ENSAPOG00000006365	zgc:171929	88	80.412	Acanthochromis_polyacanthus
ENSPMEG00000005347	zgc:171929	85	88.889	ENSAOCG00000010460	zgc:171929	71	88.889	Amphiprion_ocellaris
ENSPMEG00000005347	zgc:171929	74	63.514	ENSAPLG00000016199	OVOL2	79	63.514	Anas_platyrhynchos
ENSPMEG00000005347	zgc:171929	73	58.599	ENSACAG00000014216	OVOL2	62	58.599	Anolis_carolinensis
ENSPMEG00000005347	zgc:171929	74	62.162	ENSTSYG00000012790	OVOL2	74	62.162	Carlito_syrichta
ENSPMEG00000005347	zgc:171929	65	68.702	ENSCAPG00000005775	OVOL2	78	68.702	Cavia_aperea
ENSPMEG00000005347	zgc:171929	78	61.250	ENSCPBG00000023454	OVOL2	69	61.250	Chrysemys_picta_bellii
ENSPMEG00000005347	zgc:171929	71	61.039	ENSCANG00000033179	OVOL2	67	61.039	Colobus_angolensis_palliatus
ENSPMEG00000005347	zgc:171929	85	93.567	ENSCVAG00000001397	zgc:171929	62	93.567	Cyprinodon_variegatus
ENSPMEG00000005347	zgc:171929	80	59.006	ENSDORG00000016697	Ovol2	66	59.006	Dipodomys_ordii
ENSPMEG00000005347	zgc:171929	85	76.608	ENSELUG00000020356	zgc:171929	58	76.608	Esox_lucius
ENSPMEG00000005347	zgc:171929	74	62.838	ENSFALG00000007594	OVOL2	52	62.838	Ficedula_albicollis
ENSPMEG00000005347	zgc:171929	70	65.035	ENSFDAG00000008730	OVOL2	85	65.035	Fukomys_damarensis
ENSPMEG00000005347	zgc:171929	74	63.514	ENSGALG00000008702	OVOL2	54	63.514	Gallus_gallus
ENSPMEG00000005347	zgc:171929	68	81.752	ENSHCOG00000007100	zgc:171929	76	81.752	Hippocampus_comes
ENSPMEG00000005347	zgc:171929	65	69.466	ENSJJAG00000014942	Ovol2	56	62.987	Jaculus_jaculus
ENSPMEG00000005347	zgc:171929	85	87.135	ENSLBEG00000006082	zgc:171929	62	87.135	Labrus_bergylta
ENSPMEG00000005347	zgc:171929	69	64.493	ENSLACG00000011247	OVOL2	52	64.493	Latimeria_chalumnae
ENSPMEG00000005347	zgc:171929	85	88.304	ENSMAMG00000021196	zgc:171929	72	88.304	Mastacembelus_armatus
ENSPMEG00000005347	zgc:171929	74	62.838	ENSMGAG00000006770	OVOL2	85	62.838	Meleagris_gallopavo
ENSPMEG00000005347	zgc:171929	84	53.158	ENSMICG00000032455	OVOL2	68	53.723	Microcebus_murinus
ENSPMEG00000005347	zgc:171929	50	85.149	ENSMMOG00000006418	zgc:171929	98	85.149	Mola_mola
ENSPMEG00000005347	zgc:171929	66	67.669	ENSMODG00000005504	OVOL2	50	67.669	Monodelphis_domestica
ENSPMEG00000005347	zgc:171929	71	62.338	MGP_CAROLIEiJ_G0024381	Ovol2	64	62.338	Mus_caroli
ENSPMEG00000005347	zgc:171929	71	62.338	ENSMUSG00000037279	Ovol2	64	62.338	Mus_musculus
ENSPMEG00000005347	zgc:171929	65	68.702	MGP_PahariEiJ_G0025825	Ovol2	54	68.702	Mus_pahari
ENSPMEG00000005347	zgc:171929	71	62.338	MGP_SPRETEiJ_G0025300	Ovol2	64	62.338	Mus_spretus
ENSPMEG00000005347	zgc:171929	65	68.702	ENSNGAG00000007174	Ovol2	54	68.702	Nannospalax_galili
ENSPMEG00000005347	zgc:171929	73	62.252	ENSMEUG00000011922	OVOL2	54	62.252	Notamacropus_eugenii
ENSPMEG00000005347	zgc:171929	85	87.719	ENSONIG00000004778	zgc:171929	67	87.719	Oreochromis_niloticus
ENSPMEG00000005347	zgc:171929	74	62.500	ENSOANG00000001250	OVOL2	89	62.500	Ornithorhynchus_anatinus
ENSPMEG00000005347	zgc:171929	65	67.939	ENSOCUG00000012116	OVOL2	52	67.939	Oryctolagus_cuniculus
ENSPMEG00000005347	zgc:171929	87	85.057	ENSORLG00015015191	zgc:171929	61	89.610	Oryzias_latipes_hsok
ENSPMEG00000005347	zgc:171929	71	61.039	ENSPPAG00000032300	OVOL2	68	61.039	Pan_paniscus
ENSPMEG00000005347	zgc:171929	65	68.702	ENSPSIG00000006768	OVOL2	56	68.702	Pelodiscus_sinensis
ENSPMEG00000005347	zgc:171929	71	61.039	ENSPCOG00000013518	OVOL2	56	61.039	Propithecus_coquereli
ENSPMEG00000005347	zgc:171929	65	67.939	ENSPVAG00000001140	OVOL2	55	67.939	Pteropus_vampyrus
ENSPMEG00000005347	zgc:171929	94	77.941	ENSSMAG00000003204	zgc:171929	87	77.941	Scophthalmus_maximus
ENSPMEG00000005347	zgc:171929	65	68.702	ENSSARG00000006563	OVOL2	78	68.702	Sorex_araneus
ENSPMEG00000005347	zgc:171929	65	67.939	ENSSPUG00000001720	OVOL2	67	67.939	Sphenodon_punctatus
ENSPMEG00000005347	zgc:171929	85	89.474	ENSSPAG00000001700	zgc:171929	80	88.953	Stegastes_partitus
ENSPMEG00000005347	zgc:171929	74	63.514	ENSTGUG00000005909	OVOL2	54	63.514	Taeniopygia_guttata
ENSPMEG00000005347	zgc:171929	66	66.165	ENSXETG00000020587	ovol1	50	66.165	Xenopus_tropicalis
ENSPMEG00000005347	zgc:171929	87	99.429	ENSXMAG00000022405	zgc:171929	84	99.429	Xiphophorus_maculatus