EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000005418 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 2973 bases
Position: chrKQ551284.1:406315-409287
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000023670	RVT_1	PF00078.27	2.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000009560	-	1140	-	ENSPMEP00000023670	380 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000005418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000005418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000005418	-	92	73.370	ENSPMEG00000021732	-	90	73.370
ENSPMEG00000005418	-	68	36.923	ENSPMEG00000004673	-	65	36.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000005418	-	63	41.667	ENSACLG00000006900	-	67	41.667	Astatotilapia_calliptera
ENSPMEG00000005418	-	74	34.495	ENSDARG00000086849	si:dkey-187k19.2	50	34.495	Danio_rerio
ENSPMEG00000005418	-	72	35.338	ENSEBUG00000005774	-	84	35.338	Eptatretus_burgeri
ENSPMEG00000005418	-	90	40.290	ENSHBUG00000020868	-	83	40.290	Haplochromis_burtoni
ENSPMEG00000005418	-	72	38.989	ENSKMAG00000007124	-	56	38.989	Kryptolebias_marmoratus
ENSPMEG00000005418	-	59	40.088	ENSLBEG00000018239	-	76	40.088	Labrus_bergylta
ENSPMEG00000005418	-	79	42.904	ENSLOCG00000018030	-	85	42.904	Lepisosteus_oculatus
ENSPMEG00000005418	-	63	32.780	ENSONIG00000020426	-	67	32.780	Oreochromis_niloticus
ENSPMEG00000005418	-	83	37.736	ENSORLG00000029559	-	79	37.736	Oryzias_latipes
ENSPMEG00000005418	-	54	32.547	ENSORLG00000029764	-	80	32.547	Oryzias_latipes
ENSPMEG00000005418	-	56	31.481	ENSPFOG00000022364	-	74	31.481	Poecilia_formosa
ENSPMEG00000005418	-	93	72.507	ENSPLAG00000021304	-	88	72.507	Poecilia_latipinna
ENSPMEG00000005418	-	62	34.728	ENSSFOG00015015726	-	77	34.728	Scleropages_formosus
ENSPMEG00000005418	-	67	40.392	ENSSLDG00000000237	-	81	40.392	Seriola_lalandi_dorsalis
ENSPMEG00000005418	-	55	36.493	ENSTNIG00000000750	-	70	36.493	Tetraodon_nigroviridis
ENSPMEG00000005418	-	81	67.961	ENSXCOG00000012075	-	75	67.961	Xiphophorus_couchianus
ENSPMEG00000005418	-	98	76.726	ENSXMAG00000028317	-	88	76.726	Xiphophorus_maculatus
ENSPMEG00000005418	-	98	76.982	ENSXMAG00000020872	-	88	76.982	Xiphophorus_maculatus