EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000005864 (Gene tree)
Gene ID: 106906014
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 30945 bases
Position: chrLMXC01024346.1:347-31291
Accession: 106906014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000004610	RRM_1	PF00076.22	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000008895	-	8908	XM_014971082	ENSPMEP00000004610	2165 (aa)	XP_014826568	UPI00072E38AE

Gene Model

Click here to download ENSPMEG00000005864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000005864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000005864	setd1a	56	67.213	ENSPMEG00000020446	setd1ba	53	67.213

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000005864	setd1a	82	95.522	ENSAPOG00000018002	setd1a	79	93.333	Acanthochromis_polyacanthus
ENSPMEG00000005864	setd1a	76	92.188	ENSACIG00000007144	setd1a	99	92.476	Amphilophus_citrinellus
ENSPMEG00000005864	setd1a	100	79.578	ENSAOCG00000003663	setd1a	100	79.883	Amphiprion_ocellaris
ENSPMEG00000005864	setd1a	100	76.233	ENSATEG00000022798	setd1a	100	76.637	Anabas_testudineus
ENSPMEG00000005864	setd1a	100	79.024	ENSACLG00000024747	setd1a	100	80.154	Astatotilapia_calliptera
ENSPMEG00000005864	setd1a	59	80.405	ENSCANG00000038478	-	52	80.405	Colobus_angolensis_palliatus
ENSPMEG00000005864	setd1a	100	75.711	ENSCSEG00000021605	setd1a	100	73.836	Cynoglossus_semilaevis
ENSPMEG00000005864	setd1a	100	58.049	ENSELUG00000020261	setd1a	68	56.453	Esox_lucius
ENSPMEG00000005864	setd1a	89	83.730	ENSFHEG00000023258	setd1a	97	90.625	Fundulus_heteroclitus
ENSPMEG00000005864	setd1a	60	95.833	ENSGAFG00000011698	setd1a	86	97.959	Gambusia_affinis
ENSPMEG00000005864	setd1a	53	84.110	ENSGACG00000013688	setd1a	68	85.519	Gasterosteus_aculeatus
ENSPMEG00000005864	setd1a	100	79.521	ENSHBUG00000008893	setd1a	100	80.479	Haplochromis_burtoni
ENSPMEG00000005864	setd1a	77	85.511	ENSHCOG00000003119	setd1a	98	86.207	Hippocampus_comes
ENSPMEG00000005864	setd1a	100	79.234	ENSKMAG00000009484	setd1a	100	80.045	Kryptolebias_marmoratus
ENSPMEG00000005864	setd1a	100	74.284	ENSLBEG00000004399	setd1a	100	75.134	Labrus_bergylta
ENSPMEG00000005864	setd1a	72	90.272	ENSMAMG00000021851	setd1a	97	90.272	Mastacembelus_armatus
ENSPMEG00000005864	setd1a	100	78.933	ENSMZEG00005023141	setd1a	100	80.063	Maylandia_zebra
ENSPMEG00000005864	setd1a	72	92.837	ENSMMOG00000016992	setd1a	97	93.623	Mola_mola
ENSPMEG00000005864	setd1a	99	70.159	ENSMALG00000007401	setd1a	98	71.429	Monopterus_albus
ENSPMEG00000005864	setd1a	53	82.095	MGP_PahariEiJ_G0013726	-	100	72.081	Mus_pahari
ENSPMEG00000005864	setd1a	74	75.580	ENSNBRG00000004760	setd1a	100	75.917	Neolamprologus_brichardi
ENSPMEG00000005864	setd1a	51	81.849	ENSMEUG00000003396	-	58	78.378	Notamacropus_eugenii
ENSPMEG00000005864	setd1a	86	82.392	ENSONIG00000009854	setd1a	88	82.392	Oreochromis_niloticus
ENSPMEG00000005864	setd1a	100	75.283	ENSORLG00000002213	setd1a	100	76.460	Oryzias_latipes
ENSPMEG00000005864	setd1a	100	75.339	ENSORLG00020011897	setd1a	100	76.550	Oryzias_latipes_hni
ENSPMEG00000005864	setd1a	100	75.815	ENSORLG00015004826	setd1a	100	76.937	Oryzias_latipes_hsok
ENSPMEG00000005864	setd1a	100	75.545	ENSOMEG00000019732	setd1a	100	76.022	Oryzias_melastigma
ENSPMEG00000005864	setd1a	50	77.955	ENSPSIG00000005027	-	58	78.302	Pelodiscus_sinensis
ENSPMEG00000005864	setd1a	100	96.911	ENSPFOG00000013669	setd1a	100	96.911	Poecilia_formosa
ENSPMEG00000005864	setd1a	100	98.523	ENSPLAG00000009294	setd1a	100	98.523	Poecilia_latipinna
ENSPMEG00000005864	setd1a	100	97.280	ENSPREG00000010201	setd1a	100	97.280	Poecilia_reticulata
ENSPMEG00000005864	setd1a	100	79.357	ENSPNYG00000014139	setd1a	100	80.145	Pundamilia_nyererei
ENSPMEG00000005864	setd1a	100	59.340	ENSPNAG00000019165	setd1a	100	59.169	Pygocentrus_nattereri
ENSPMEG00000005864	setd1a	51	80.887	ENSRROG00000040062	-	64	80.887	Rhinopithecus_roxellana
ENSPMEG00000005864	setd1a	100	76.152	ENSSMAG00000008846	setd1a	100	76.680	Scophthalmus_maximus
ENSPMEG00000005864	setd1a	100	79.200	ENSSDUG00000022142	setd1a	100	78.751	Seriola_dumerili
ENSPMEG00000005864	setd1a	100	79.245	ENSSLDG00000018250	setd1a	100	78.796	Seriola_lalandi_dorsalis
ENSPMEG00000005864	setd1a	100	79.127	ENSSPAG00000007822	setd1a	100	79.532	Stegastes_partitus
ENSPMEG00000005864	setd1a	78	81.702	ENSTRUG00000008953	setd1a	92	81.435	Takifugu_rubripes
ENSPMEG00000005864	setd1a	95	93.366	ENSXCOG00000017585	setd1a	59	94.033	Xiphophorus_couchianus
ENSPMEG00000005864	setd1a	100	96.591	ENSXMAG00000008021	setd1a	100	96.591	Xiphophorus_maculatus