EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000005890 (Gene tree)
Gene ID: 106922022
Gene Symbol: SRL (1 of many)
Alias: -
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 21824 bases
Position: chrKQ551515.1:51073-72896
Accession: 106922022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000004632	MMR_HSR1	PF01926.23	6.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000008854	SRL (1 of many)-201	5056	XM_014994113	ENSPMEP00000004632	765 (aa)	XP_014849599	-

Gene Model

Click here to download ENSPMEG00000005890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000005890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000005890	SRL	53	31.941	ENSPMEG00000006514	ehd3	70	32.474
ENSPMEG00000005890	SRL	54	30.714	ENSPMEG00000017519	ehd4	68	31.959
ENSPMEG00000005890	SRL	55	32.634	ENSPMEG00000008030	ehd2b	69	33.673
ENSPMEG00000005890	SRL	61	75.378	ENSPMEG00000006745	srl	98	75.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000005890	SRL	61	71.215	ENSG00000185739	SRL	99	73.923	Homo_sapiens
ENSPMEG00000005890	SRL	68	82.798	ENSAPOG00000012432	SRL	99	86.117	Acanthochromis_polyacanthus
ENSPMEG00000005890	SRL	61	73.504	ENSAPOG00000018093	srl	99	74.670	Acanthochromis_polyacanthus
ENSPMEG00000005890	SRL	59	73.626	ENSAMEG00000010862	SRL	50	73.304	Ailuropoda_melanoleuca
ENSPMEG00000005890	SRL	61	74.730	ENSACIG00000015799	srl	99	75.162	Amphilophus_citrinellus
ENSPMEG00000005890	SRL	60	85.900	ENSACIG00000015419	SRL	99	85.900	Amphilophus_citrinellus
ENSPMEG00000005890	SRL	61	86.752	ENSAOCG00000017049	SRL	99	86.325	Amphiprion_ocellaris
ENSPMEG00000005890	SRL	58	74.497	ENSAOCG00000007574	srl	100	74.944	Amphiprion_ocellaris
ENSPMEG00000005890	SRL	61	81.624	ENSAPEG00000006533	SRL	99	82.479	Amphiprion_percula
ENSPMEG00000005890	SRL	61	73.718	ENSAPEG00000006911	srl	97	74.145	Amphiprion_percula
ENSPMEG00000005890	SRL	61	74.145	ENSATEG00000024315	srl	97	74.573	Anabas_testudineus
ENSPMEG00000005890	SRL	72	78.191	ENSATEG00000009643	SRL	97	61.430	Anabas_testudineus
ENSPMEG00000005890	SRL	59	72.532	ENSACAG00000016380	SRL	85	71.368	Anolis_carolinensis
ENSPMEG00000005890	SRL	99	65.174	ENSACLG00000024674	SRL	99	65.675	Astatotilapia_calliptera
ENSPMEG00000005890	SRL	61	74.573	ENSACLG00000027685	srl	98	75.488	Astatotilapia_calliptera
ENSPMEG00000005890	SRL	60	74.026	ENSAMXG00000018789	srl	88	74.026	Astyanax_mexicanus
ENSPMEG00000005890	SRL	58	80.198	ENSAMXG00000038693	SRL	100	75.824	Astyanax_mexicanus
ENSPMEG00000005890	SRL	62	71.882	ENSBTAG00000001078	SRL	59	70.204	Bos_taurus
ENSPMEG00000005890	SRL	59	72.967	ENSCJAG00000019750	SRL	93	73.742	Callithrix_jacchus
ENSPMEG00000005890	SRL	59	73.626	ENSCAFG00000019233	SRL	82	73.304	Canis_familiaris
ENSPMEG00000005890	SRL	59	73.626	ENSCAFG00020025024	SRL	64	66.479	Canis_lupus_dingo
ENSPMEG00000005890	SRL	63	70.393	ENSCHIG00000017927	SRL	59	70.000	Capra_hircus
ENSPMEG00000005890	SRL	59	72.747	ENSTSYG00000007919	SRL	99	74.150	Carlito_syrichta
ENSPMEG00000005890	SRL	59	72.967	ENSCPOG00000012643	SRL	94	73.742	Cavia_porcellus
ENSPMEG00000005890	SRL	59	68.791	ENSCCAG00000032646	SRL	100	74.873	Cebus_capucinus
ENSPMEG00000005890	SRL	59	73.846	ENSCATG00000032227	-	96	71.975	Cercocebus_atys
ENSPMEG00000005890	SRL	59	72.967	ENSCLAG00000016242	SRL	94	73.742	Chinchilla_lanigera
ENSPMEG00000005890	SRL	52	76.382	ENSCHOG00000001618	SRL	52	76.000	Choloepus_hoffmanni
ENSPMEG00000005890	SRL	68	75.879	ENSCPBG00000026371	SRL	96	70.650	Chrysemys_picta_bellii
ENSPMEG00000005890	SRL	55	55.819	ENSCING00000005231	-	94	55.819	Ciona_intestinalis
ENSPMEG00000005890	SRL	59	72.747	ENSCANG00000035872	SRL	99	73.923	Colobus_angolensis_palliatus
ENSPMEG00000005890	SRL	59	72.867	ENSCGRG00001016630	Srl	94	73.961	Cricetulus_griseus_chok1gshd
ENSPMEG00000005890	SRL	59	72.867	ENSCGRG00000005458	Srl	94	73.961	Cricetulus_griseus_crigri
ENSPMEG00000005890	SRL	60	81.818	ENSCSEG00000011866	SRL	90	82.684	Cynoglossus_semilaevis
ENSPMEG00000005890	SRL	61	73.932	ENSCSEG00000016151	srl	97	74.359	Cynoglossus_semilaevis
ENSPMEG00000005890	SRL	61	74.946	ENSCVAG00000003513	srl	96	76.264	Cyprinodon_variegatus
ENSPMEG00000005890	SRL	96	77.807	ENSCVAG00000022465	SRL	97	77.025	Cyprinodon_variegatus
ENSPMEG00000005890	SRL	61	74.786	ENSDARG00000104587	srl	97	74.786	Danio_rerio
ENSPMEG00000005890	SRL	51	79.337	ENSDARG00000112959	CABZ01072309.1	100	78.571	Danio_rerio
ENSPMEG00000005890	SRL	59	73.407	ENSDNOG00000011643	SRL	53	73.085	Dasypus_novemcinctus
ENSPMEG00000005890	SRL	59	72.867	ENSDORG00000014807	Srl	94	73.961	Dipodomys_ordii
ENSPMEG00000005890	SRL	59	73.789	ENSEASG00005000942	SRL	57	68.566	Equus_asinus_asinus
ENSPMEG00000005890	SRL	61	71.215	ENSECAG00000024219	SRL	96	71.975	Equus_caballus
ENSPMEG00000005890	SRL	61	72.594	ENSELUG00000015616	srl	96	72.594	Esox_lucius
ENSPMEG00000005890	SRL	65	73.400	ENSELUG00000022266	SRL	53	73.600	Esox_lucius
ENSPMEG00000005890	SRL	59	73.626	ENSFCAG00000022075	SRL	97	71.702	Felis_catus
ENSPMEG00000005890	SRL	59	73.731	ENSFALG00000004328	SRL	63	73.289	Ficedula_albicollis
ENSPMEG00000005890	SRL	59	73.187	ENSFDAG00000006199	SRL	94	73.961	Fukomys_damarensis
ENSPMEG00000005890	SRL	61	74.730	ENSFHEG00000011239	srl	97	75.000	Fundulus_heteroclitus
ENSPMEG00000005890	SRL	99	78.544	ENSFHEG00000011854	SRL	97	92.735	Fundulus_heteroclitus
ENSPMEG00000005890	SRL	59	73.019	ENSGMOG00000014954	srl	100	72.921	Gadus_morhua
ENSPMEG00000005890	SRL	59	73.951	ENSGALG00000038884	SRL	93	73.510	Gallus_gallus
ENSPMEG00000005890	SRL	99	94.495	ENSGAFG00000016984	SRL	100	94.626	Gambusia_affinis
ENSPMEG00000005890	SRL	61	75.162	ENSGAFG00000000010	srl	98	75.322	Gambusia_affinis
ENSPMEG00000005890	SRL	60	73.291	ENSGACG00000011332	srl	100	73.718	Gasterosteus_aculeatus
ENSPMEG00000005890	SRL	68	67.241	ENSGAGG00000015590	SRL	51	66.794	Gopherus_agassizii
ENSPMEG00000005890	SRL	59	73.846	ENSGGOG00000011312	-	96	71.975	Gorilla_gorilla
ENSPMEG00000005890	SRL	99	65.174	ENSHBUG00000015710	SRL	99	65.239	Haplochromis_burtoni
ENSPMEG00000005890	SRL	61	74.573	ENSHBUG00000007581	srl	98	75.488	Haplochromis_burtoni
ENSPMEG00000005890	SRL	59	72.967	ENSHGLG00000015271	SRL	94	73.742	Heterocephalus_glaber_female
ENSPMEG00000005890	SRL	59	72.967	ENSHGLG00100019378	SRL	94	73.742	Heterocephalus_glaber_male
ENSPMEG00000005890	SRL	99	73.666	ENSHCOG00000001012	SRL	69	72.978	Hippocampus_comes
ENSPMEG00000005890	SRL	61	74.194	ENSHCOG00000008687	srl	99	74.675	Hippocampus_comes
ENSPMEG00000005890	SRL	61	72.903	ENSIPUG00000012513	srl	98	72.128	Ictalurus_punctatus
ENSPMEG00000005890	SRL	59	70.524	ENSIPUG00000011609	SRL	100	69.869	Ictalurus_punctatus
ENSPMEG00000005890	SRL	66	69.583	ENSSTOG00000021151	-	94	73.961	Ictidomys_tridecemlineatus
ENSPMEG00000005890	SRL	59	72.867	ENSJJAG00000016400	Srl	94	73.961	Jaculus_jaculus
ENSPMEG00000005890	SRL	56	78.788	ENSKMAG00000014115	srl	100	72.805	Kryptolebias_marmoratus
ENSPMEG00000005890	SRL	96	67.742	ENSKMAG00000019537	SRL	100	87.445	Kryptolebias_marmoratus
ENSPMEG00000005890	SRL	61	73.932	ENSLBEG00000026643	srl	97	74.359	Labrus_bergylta
ENSPMEG00000005890	SRL	61	84.615	ENSLBEG00000013811	SRL	98	84.188	Labrus_bergylta
ENSPMEG00000005890	SRL	59	71.648	ENSLACG00000002825	SRL	98	71.648	Latimeria_chalumnae
ENSPMEG00000005890	SRL	59	75.385	ENSLOCG00000002644	srl	94	74.725	Lepisosteus_oculatus
ENSPMEG00000005890	SRL	59	73.407	ENSLAFG00000006329	SRL	50	73.304	Loxodonta_africana
ENSPMEG00000005890	SRL	57	73.121	ENSMFAG00000037383	SRL	99	73.923	Macaca_fascicularis
ENSPMEG00000005890	SRL	59	73.846	ENSMNEG00000019236	-	93	73.523	Macaca_nemestrina
ENSPMEG00000005890	SRL	59	66.813	ENSMLEG00000032156	SRL	96	66.242	Mandrillus_leucophaeus
ENSPMEG00000005890	SRL	82	77.917	ENSMAMG00000013756	SRL	100	61.414	Mastacembelus_armatus
ENSPMEG00000005890	SRL	60	74.617	ENSMAMG00000023322	srl	96	74.514	Mastacembelus_armatus
ENSPMEG00000005890	SRL	61	74.573	ENSMZEG00005004548	srl	98	75.488	Maylandia_zebra
ENSPMEG00000005890	SRL	96	66.324	ENSMZEG00005004010	SRL	97	66.329	Maylandia_zebra
ENSPMEG00000005890	SRL	59	73.951	ENSMGAG00000009342	SRL	92	80.000	Meleagris_gallopavo
ENSPMEG00000005890	SRL	59	74.286	ENSMICG00000032307	SRL	93	73.961	Microcebus_murinus
ENSPMEG00000005890	SRL	59	72.648	ENSMOCG00000008208	Srl	94	73.742	Microtus_ochrogaster
ENSPMEG00000005890	SRL	61	73.866	ENSMMOG00000013970	srl	100	74.298	Mola_mola
ENSPMEG00000005890	SRL	59	84.188	ENSMMOG00000021572	SRL	99	83.333	Mola_mola
ENSPMEG00000005890	SRL	61	73.134	ENSMODG00000016380	-	51	72.824	Monodelphis_domestica
ENSPMEG00000005890	SRL	61	73.820	ENSMALG00000005039	srl	99	74.249	Monopterus_albus
ENSPMEG00000005890	SRL	56	83.796	ENSMALG00000000670	SRL	98	83.796	Monopterus_albus
ENSPMEG00000005890	SRL	61	72.611	MGP_CAROLIEiJ_G0020400	Srl	95	73.118	Mus_caroli
ENSPMEG00000005890	SRL	61	72.611	ENSMUSG00000022519	Srl	95	73.118	Mus_musculus
ENSPMEG00000005890	SRL	61	72.611	MGP_SPRETEiJ_G0021294	Srl	95	73.118	Mus_spretus
ENSPMEG00000005890	SRL	59	73.626	ENSMPUG00000015025	SRL	54	73.304	Mustela_putorius_furo
ENSPMEG00000005890	SRL	68	68.462	ENSMLUG00000030733	SRL	63	68.199	Myotis_lucifugus
ENSPMEG00000005890	SRL	59	73.085	ENSNGAG00000019741	Srl	94	74.179	Nannospalax_galili
ENSPMEG00000005890	SRL	62	73.784	ENSNBRG00000023775	srl	98	74.207	Neolamprologus_brichardi
ENSPMEG00000005890	SRL	99	65.590	ENSNBRG00000002422	SRL	99	65.556	Neolamprologus_brichardi
ENSPMEG00000005890	SRL	59	68.132	ENSNLEG00000029051	SRL	93	68.928	Nomascus_leucogenys
ENSPMEG00000005890	SRL	65	65.789	ENSOPRG00000000477	-	56	65.524	Ochotona_princeps
ENSPMEG00000005890	SRL	61	72.786	ENSODEG00000013256	SRL	96	73.391	Octodon_degus
ENSPMEG00000005890	SRL	61	74.730	ENSONIG00000005192	srl	96	75.162	Oreochromis_niloticus
ENSPMEG00000005890	SRL	67	68.493	ENSOCUG00000025140	SRL	54	68.226	Oryctolagus_cuniculus
ENSPMEG00000005890	SRL	100	66.292	ENSORLG00000015064	SRL	99	85.560	Oryzias_latipes
ENSPMEG00000005890	SRL	61	74.514	ENSORLG00000008291	srl	94	74.786	Oryzias_latipes
ENSPMEG00000005890	SRL	61	74.730	ENSORLG00020019784	srl	82	75.000	Oryzias_latipes_hni
ENSPMEG00000005890	SRL	61	85.991	ENSORLG00020018173	SRL	99	85.776	Oryzias_latipes_hni
ENSPMEG00000005890	SRL	61	85.991	ENSORLG00015019063	SRL	99	85.560	Oryzias_latipes_hsok
ENSPMEG00000005890	SRL	61	74.514	ENSORLG00015009342	srl	94	74.786	Oryzias_latipes_hsok
ENSPMEG00000005890	SRL	92	73.984	ENSOMEG00000005682	SRL	68	87.815	Oryzias_melastigma
ENSPMEG00000005890	SRL	61	74.946	ENSOMEG00000010006	srl	98	75.938	Oryzias_melastigma
ENSPMEG00000005890	SRL	65	69.661	ENSOGAG00000029266	SRL	58	69.384	Otolemur_garnettii
ENSPMEG00000005890	SRL	59	73.348	ENSOARG00000003074	SRL	55	73.026	Ovis_aries
ENSPMEG00000005890	SRL	59	73.846	ENSPPAG00000024919	-	99	73.923	Pan_paniscus
ENSPMEG00000005890	SRL	59	72.527	ENSPPRG00000010274	SRL	99	73.804	Panthera_pardus
ENSPMEG00000005890	SRL	59	72.527	ENSPTIG00000015162	SRL	99	73.804	Panthera_tigris_altaica
ENSPMEG00000005890	SRL	59	73.846	ENSPTRG00000007712	SRL	99	73.923	Pan_troglodytes
ENSPMEG00000005890	SRL	59	72.747	ENSPANG00000013804	SRL	95	73.523	Papio_anubis
ENSPMEG00000005890	SRL	61	75.810	ENSPKIG00000006405	srl	95	75.810	Paramormyrops_kingsleyae
ENSPMEG00000005890	SRL	71	72.068	ENSPKIG00000024974	SRL	90	72.138	Paramormyrops_kingsleyae
ENSPMEG00000005890	SRL	59	82.418	ENSPMGG00000023505	-	99	81.978	Periophthalmus_magnuspinnatus
ENSPMEG00000005890	SRL	59	75.385	ENSPMGG00000021081	srl	95	75.824	Periophthalmus_magnuspinnatus
ENSPMEG00000005890	SRL	59	72.867	ENSPEMG00000015842	Srl	94	73.961	Peromyscus_maniculatus_bairdii
ENSPMEG00000005890	SRL	57	63.820	ENSPMAG00000004786	srl	99	63.146	Petromyzon_marinus
ENSPMEG00000005890	SRL	59	74.890	ENSPCIG00000012128	SRL	96	74.561	Phascolarctos_cinereus
ENSPMEG00000005890	SRL	61	73.684	ENSPFOG00000011408	srl	96	73.695	Poecilia_formosa
ENSPMEG00000005890	SRL	100	98.693	ENSPLAG00000002932	SRL	100	98.693	Poecilia_latipinna
ENSPMEG00000005890	SRL	61	75.107	ENSPLAG00000008017	srl	98	75.536	Poecilia_latipinna
ENSPMEG00000005890	SRL	61	75.162	ENSPREG00000007751	srl	99	75.594	Poecilia_reticulata
ENSPMEG00000005890	SRL	100	96.601	ENSPREG00000000315	SRL	100	96.601	Poecilia_reticulata
ENSPMEG00000005890	SRL	58	72.235	ENSPPYG00000007053	SRL	100	73.034	Pongo_abelii
ENSPMEG00000005890	SRL	59	74.229	ENSPCAG00000003378	-	50	73.904	Procavia_capensis
ENSPMEG00000005890	SRL	59	72.747	ENSPCOG00000023135	SRL	99	74.150	Propithecus_coquereli
ENSPMEG00000005890	SRL	62	71.967	ENSPVAG00000006586	SRL	60	68.288	Pteropus_vampyrus
ENSPMEG00000005890	SRL	99	64.951	ENSPNYG00000003423	SRL	99	65.116	Pundamilia_nyererei
ENSPMEG00000005890	SRL	61	74.573	ENSPNYG00000001200	srl	98	75.488	Pundamilia_nyererei
ENSPMEG00000005890	SRL	61	73.650	ENSPNAG00000023106	srl	96	73.650	Pygocentrus_nattereri
ENSPMEG00000005890	SRL	61	76.017	ENSPNAG00000007361	-	93	76.017	Pygocentrus_nattereri
ENSPMEG00000005890	SRL	59	74.066	ENSSBOG00000029273	SRL	93	73.742	Saimiri_boliviensis_boliviensis
ENSPMEG00000005890	SRL	60	74.836	ENSSFOG00015009773	srl	96	74.298	Scleropages_formosus
ENSPMEG00000005890	SRL	60	73.742	ENSSFOG00015021327	SRL	52	68.390	Scleropages_formosus
ENSPMEG00000005890	SRL	83	73.134	ENSSMAG00000002232	SRL	72	72.937	Scophthalmus_maximus
ENSPMEG00000005890	SRL	60	74.510	ENSSMAG00000016274	srl	98	74.837	Scophthalmus_maximus
ENSPMEG00000005890	SRL	60	83.795	ENSSDUG00000009161	SRL	100	83.795	Seriola_dumerili
ENSPMEG00000005890	SRL	60	75.381	ENSSDUG00000010808	srl	98	75.817	Seriola_dumerili
ENSPMEG00000005890	SRL	61	75.162	ENSSLDG00000022024	srl	97	75.705	Seriola_lalandi_dorsalis
ENSPMEG00000005890	SRL	59	90.330	ENSSLDG00000014601	SRL	99	90.330	Seriola_lalandi_dorsalis
ENSPMEG00000005890	SRL	60	72.210	ENSSPUG00000016859	SRL	98	71.772	Sphenodon_punctatus
ENSPMEG00000005890	SRL	60	85.249	ENSSPAG00000014254	SRL	99	85.249	Stegastes_partitus
ENSPMEG00000005890	SRL	61	74.082	ENSSPAG00000019105	srl	95	74.514	Stegastes_partitus
ENSPMEG00000005890	SRL	59	73.789	ENSSSCG00000007949	SRL	98	73.465	Sus_scrofa
ENSPMEG00000005890	SRL	59	73.731	ENSTGUG00000003951	-	97	73.289	Taeniopygia_guttata
ENSPMEG00000005890	SRL	72	71.846	ENSTRUG00000013310	SRL	97	59.924	Takifugu_rubripes
ENSPMEG00000005890	SRL	61	74.145	ENSTRUG00000006005	srl	97	74.573	Takifugu_rubripes
ENSPMEG00000005890	SRL	61	74.082	ENSTNIG00000009739	srl	97	74.359	Tetraodon_nigroviridis
ENSPMEG00000005890	SRL	64	69.478	ENSUAMG00000005701	SRL	63	67.433	Ursus_americanus
ENSPMEG00000005890	SRL	64	69.478	ENSUMAG00000002574	SRL	63	67.433	Ursus_maritimus
ENSPMEG00000005890	SRL	64	68.577	ENSVVUG00000016331	-	57	66.729	Vulpes_vulpes
ENSPMEG00000005890	SRL	59	73.626	ENSXETG00000017313	srl	98	73.304	Xenopus_tropicalis
ENSPMEG00000005890	SRL	57	76.147	ENSXCOG00000010424	srl	97	76.606	Xiphophorus_couchianus
ENSPMEG00000005890	SRL	61	94.397	ENSXCOG00000014584	SRL	100	94.397	Xiphophorus_couchianus
ENSPMEG00000005890	SRL	61	75.162	ENSXMAG00000004625	srl	92	75.427	Xiphophorus_maculatus
ENSPMEG00000005890	SRL	96	95.296	ENSXMAG00000027598	SRL	100	95.504	Xiphophorus_maculatus