EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000006042 (Gene tree)
Gene ID: 106920168
Gene Symbol: SRSF6 (1 of many)
Alias: -
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 3406 bases
Position: chrKQ551008.1:174768-178173
Accession: 106920168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000004754	RRM_1	PF00076.22	1.3e-31	1	2
ENSPMEP00000004754	RRM_1	PF00076.22	1.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000008643	SRSF6 (1 of many)-201	1035	XM_014991031	ENSPMEP00000004754	344 (aa)	XP_014846517	-

Gene Model

Click here to download ENSPMEG00000006042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000006042	SRSF6	62	93.458	ENSPMEG00000006056	SRSF6	100	93.458
ENSPMEG00000006042	SRSF6	53	76.471	ENSPMEG00000023638	srsf4	53	73.913
ENSPMEG00000006042	SRSF6	52	60.106	ENSPMEG00000012751	srsf5b	82	58.871
ENSPMEG00000006042	SRSF6	53	37.173	ENSPMEG00000008809	srsf9	73	38.021

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006042	SRSF6	54	87.027	ENSG00000124193	SRSF6	58	92.308	Homo_sapiens
ENSPMEG00000006042	SRSF6	54	69.355	ENSAMEG00000003710	SRSF6	53	69.730	Ailuropoda_melanoleuca
ENSPMEG00000006042	SRSF6	92	82.390	ENSACIG00000023658	-	84	91.111	Amphilophus_citrinellus
ENSPMEG00000006042	SRSF6	100	63.218	ENSACIG00000020091	-	95	81.250	Amphilophus_citrinellus
ENSPMEG00000006042	SRSF6	53	86.486	ENSAOCG00000004309	-	57	84.239	Amphiprion_ocellaris
ENSPMEG00000006042	SRSF6	55	81.122	ENSAPEG00000020746	-	96	60.923	Amphiprion_percula
ENSPMEG00000006042	SRSF6	94	84.940	ENSAPEG00000013086	-	53	93.514	Amphiprion_percula
ENSPMEG00000006042	SRSF6	53	83.696	ENSATEG00000007255	-	71	80.328	Anabas_testudineus
ENSPMEG00000006042	SRSF6	53	86.413	ENSACAG00000002061	SRSF6	52	85.326	Anolis_carolinensis
ENSPMEG00000006042	SRSF6	54	87.027	ENSANAG00000024080	SRSF6	58	92.308	Aotus_nancymaae
ENSPMEG00000006042	SRSF6	94	74.769	ENSAMXG00000042692	-	96	86.667	Astyanax_mexicanus
ENSPMEG00000006042	SRSF6	54	87.027	ENSBTAG00000008527	SRSF6	58	93.590	Bos_taurus
ENSPMEG00000006042	SRSF6	54	87.027	ENSCJAG00000048403	SRSF6	68	85.326	Callithrix_jacchus
ENSPMEG00000006042	SRSF6	54	87.027	ENSCAFG00000009289	SRSF6	58	93.590	Canis_familiaris
ENSPMEG00000006042	SRSF6	54	87.027	ENSCAFG00020013559	SRSF6	58	93.590	Canis_lupus_dingo
ENSPMEG00000006042	SRSF6	54	85.946	ENSCHIG00000009148	-	53	84.239	Capra_hircus
ENSPMEG00000006042	SRSF6	54	87.027	ENSCHIG00000015890	-	58	93.590	Capra_hircus
ENSPMEG00000006042	SRSF6	54	81.081	ENSCPOG00000011761	SRSF6	58	92.308	Cavia_porcellus
ENSPMEG00000006042	SRSF6	54	76.344	ENSCCAG00000018540	-	60	74.595	Cebus_capucinus
ENSPMEG00000006042	SRSF6	54	87.027	ENSCCAG00000026018	-	58	92.308	Cebus_capucinus
ENSPMEG00000006042	SRSF6	54	87.027	ENSCATG00000030794	SRSF6	58	92.308	Cercocebus_atys
ENSPMEG00000006042	SRSF6	54	87.027	ENSCLAG00000010247	SRSF6	58	92.308	Chinchilla_lanigera
ENSPMEG00000006042	SRSF6	54	87.027	ENSCSAG00000014022	SRSF6	53	85.326	Chlorocebus_sabaeus
ENSPMEG00000006042	SRSF6	54	86.631	ENSCPBG00000018200	SRSF6	54	88.710	Chrysemys_picta_bellii
ENSPMEG00000006042	SRSF6	54	85.946	ENSCANG00000037774	-	53	84.239	Colobus_angolensis_palliatus
ENSPMEG00000006042	SRSF6	54	87.027	ENSCGRG00001022339	Srsf6	58	92.308	Cricetulus_griseus_chok1gshd
ENSPMEG00000006042	SRSF6	53	88.235	ENSDARG00000016783	srsf6b	83	93.671	Danio_rerio
ENSPMEG00000006042	SRSF6	54	87.027	ENSDNOG00000008410	SRSF6	53	85.326	Dasypus_novemcinctus
ENSPMEG00000006042	SRSF6	54	87.027	ENSDORG00000028378	Srsf6	58	92.308	Dipodomys_ordii
ENSPMEG00000006042	SRSF6	54	83.243	ENSETEG00000006221	SRSF6	53	82.609	Echinops_telfairi
ENSPMEG00000006042	SRSF6	54	87.027	ENSEASG00005023429	SRSF6	53	85.326	Equus_asinus_asinus
ENSPMEG00000006042	SRSF6	54	87.027	ENSECAG00000023932	SRSF6	56	85.326	Equus_caballus
ENSPMEG00000006042	SRSF6	53	88.462	ENSELUG00000013506	SRSF6	71	92.405	Esox_lucius
ENSPMEG00000006042	SRSF6	53	87.766	ENSELUG00000024182	SRSF6	90	86.179	Esox_lucius
ENSPMEG00000006042	SRSF6	54	87.027	ENSFCAG00000032814	SRSF6	53	85.326	Felis_catus
ENSPMEG00000006042	SRSF6	94	86.646	ENSFHEG00000023065	srsf6a	93	85.404	Fundulus_heteroclitus
ENSPMEG00000006042	SRSF6	53	85.714	ENSGMOG00000014458	srsf6a	51	81.579	Gadus_morhua
ENSPMEG00000006042	SRSF6	52	76.667	ENSGMOG00000006105	srsf6a	62	73.889	Gadus_morhua
ENSPMEG00000006042	SRSF6	53	87.166	ENSGALG00000000990	SRSF6	89	65.831	Gallus_gallus
ENSPMEG00000006042	SRSF6	93	71.751	ENSGACG00000006084	srsf6a	95	74.359	Gasterosteus_aculeatus
ENSPMEG00000006042	SRSF6	54	86.631	ENSGAGG00000003238	SRSF6	54	88.710	Gopherus_agassizii
ENSPMEG00000006042	SRSF6	54	87.027	ENSGGOG00000009808	SRSF6	58	92.308	Gorilla_gorilla
ENSPMEG00000006042	SRSF6	66	76.170	ENSHBUG00000006386	-	57	83.696	Haplochromis_burtoni
ENSPMEG00000006042	SRSF6	89	57.929	ENSHGLG00000007701	-	57	67.391	Heterocephalus_glaber_female
ENSPMEG00000006042	SRSF6	54	87.027	ENSHGLG00000007348	SRSF6	58	92.308	Heterocephalus_glaber_female
ENSPMEG00000006042	SRSF6	91	71.019	ENSHCOG00000002740	srsf6a	57	87.500	Hippocampus_comes
ENSPMEG00000006042	SRSF6	53	87.027	ENSIPUG00000004776	-	63	89.130	Ictalurus_punctatus
ENSPMEG00000006042	SRSF6	54	87.027	ENSSTOG00000010866	SRSF6	58	92.308	Ictidomys_tridecemlineatus
ENSPMEG00000006042	SRSF6	94	73.913	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSPMEG00000006042	SRSF6	53	93.478	ENSLBEG00000007356	srsf6a	51	94.022	Labrus_bergylta
ENSPMEG00000006042	SRSF6	90	73.567	ENSLACG00000005466	SRSF6	54	85.326	Latimeria_chalumnae
ENSPMEG00000006042	SRSF6	54	87.027	ENSMFAG00000036925	SRSF6	58	92.308	Macaca_fascicularis
ENSPMEG00000006042	SRSF6	54	87.027	ENSMMUG00000006742	SRSF6	58	92.308	Macaca_mulatta
ENSPMEG00000006042	SRSF6	54	86.486	ENSMNEG00000038270	-	53	84.783	Macaca_nemestrina
ENSPMEG00000006042	SRSF6	54	86.486	ENSMNEG00000027392	-	58	91.026	Macaca_nemestrina
ENSPMEG00000006042	SRSF6	53	96.757	ENSMAMG00000017161	srsf6a	94	83.784	Mastacembelus_armatus
ENSPMEG00000006042	SRSF6	53	86.264	ENSMZEG00005020658	-	60	86.264	Maylandia_zebra
ENSPMEG00000006042	SRSF6	66	76.695	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSPMEG00000006042	SRSF6	54	86.486	ENSMICG00000008537	SRSF6	58	92.308	Microcebus_murinus
ENSPMEG00000006042	SRSF6	54	87.568	ENSMODG00000003107	SRSF6	54	87.500	Monodelphis_domestica
ENSPMEG00000006042	SRSF6	78	83.333	ENSMALG00000003702	srsf6a	62	80.769	Monopterus_albus
ENSPMEG00000006042	SRSF6	54	87.027	MGP_CAROLIEiJ_G0024606	Srsf6	58	92.308	Mus_caroli
ENSPMEG00000006042	SRSF6	54	87.027	ENSMUSG00000016921	Srsf6	58	92.308	Mus_musculus
ENSPMEG00000006042	SRSF6	54	87.027	MGP_PahariEiJ_G0026050	Srsf6	58	92.308	Mus_pahari
ENSPMEG00000006042	SRSF6	54	87.027	MGP_SPRETEiJ_G0025528	Srsf6	58	92.308	Mus_spretus
ENSPMEG00000006042	SRSF6	54	87.027	ENSMPUG00000017692	SRSF6	64	85.326	Mustela_putorius_furo
ENSPMEG00000006042	SRSF6	54	59.434	ENSMLUG00000016618	SRSF6	53	57.143	Myotis_lucifugus
ENSPMEG00000006042	SRSF6	54	87.027	ENSNGAG00000017560	Srsf6	58	92.308	Nannospalax_galili
ENSPMEG00000006042	SRSF6	53	83.696	ENSNBRG00000014709	-	57	83.696	Neolamprologus_brichardi
ENSPMEG00000006042	SRSF6	76	95.628	ENSNBRG00000001846	-	91	79.758	Neolamprologus_brichardi
ENSPMEG00000006042	SRSF6	54	87.027	ENSNLEG00000006524	SRSF6	58	92.308	Nomascus_leucogenys
ENSPMEG00000006042	SRSF6	54	87.568	ENSMEUG00000014615	SRSF6	61	87.500	Notamacropus_eugenii
ENSPMEG00000006042	SRSF6	93	82.298	ENSONIG00000001925	-	88	83.901	Oreochromis_niloticus
ENSPMEG00000006042	SRSF6	53	83.696	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSPMEG00000006042	SRSF6	53	54.144	ENSOCUG00000023999	-	70	50.549	Oryctolagus_cuniculus
ENSPMEG00000006042	SRSF6	54	67.179	ENSOCUG00000009785	-	63	68.063	Oryctolagus_cuniculus
ENSPMEG00000006042	SRSF6	54	75.135	ENSOMEG00000006001	srsf6a	62	75.543	Oryzias_melastigma
ENSPMEG00000006042	SRSF6	54	86.486	ENSOGAG00000014468	SRSF6	53	84.783	Otolemur_garnettii
ENSPMEG00000006042	SRSF6	54	80.208	ENSOARG00000003117	SRSF6	53	83.152	Ovis_aries
ENSPMEG00000006042	SRSF6	54	71.351	ENSPPAG00000043131	-	57	71.196	Pan_paniscus
ENSPMEG00000006042	SRSF6	54	86.486	ENSPPAG00000034327	-	53	84.783	Pan_paniscus
ENSPMEG00000006042	SRSF6	54	87.027	ENSPPRG00000008917	SRSF6	53	85.326	Panthera_pardus
ENSPMEG00000006042	SRSF6	54	71.351	ENSPTRG00000046274	-	57	71.196	Pan_troglodytes
ENSPMEG00000006042	SRSF6	54	87.027	ENSPTRG00000044686	-	58	92.308	Pan_troglodytes
ENSPMEG00000006042	SRSF6	54	87.027	ENSPANG00000035224	SRSF6	58	92.308	Papio_anubis
ENSPMEG00000006042	SRSF6	94	78.279	ENSPKIG00000018463	-	86	88.043	Paramormyrops_kingsleyae
ENSPMEG00000006042	SRSF6	88	55.663	ENSPKIG00000015703	-	95	62.000	Paramormyrops_kingsleyae
ENSPMEG00000006042	SRSF6	94	80.805	ENSPMGG00000014963	srsf6a	55	94.022	Periophthalmus_magnuspinnatus
ENSPMEG00000006042	SRSF6	54	87.568	ENSPCIG00000003820	SRSF6	58	94.872	Phascolarctos_cinereus
ENSPMEG00000006042	SRSF6	100	89.764	ENSPFOG00000006437	srsf6a	90	100.000	Poecilia_formosa
ENSPMEG00000006042	SRSF6	94	90.390	ENSPLAG00000009243	srsf6a	94	89.790	Poecilia_latipinna
ENSPMEG00000006042	SRSF6	54	87.027	ENSPPYG00000011019	SRSF6	53	85.326	Pongo_abelii
ENSPMEG00000006042	SRSF6	54	86.486	ENSPCAG00000010954	SRSF6	55	84.783	Procavia_capensis
ENSPMEG00000006042	SRSF6	54	86.486	ENSPCOG00000026364	SRSF6	58	92.308	Propithecus_coquereli
ENSPMEG00000006042	SRSF6	54	87.568	ENSPVAG00000015232	SRSF6	53	86.339	Pteropus_vampyrus
ENSPMEG00000006042	SRSF6	80	95.628	ENSPNYG00000011272	-	51	92.973	Pundamilia_nyererei
ENSPMEG00000006042	SRSF6	53	83.696	ENSPNYG00000004944	-	57	83.696	Pundamilia_nyererei
ENSPMEG00000006042	SRSF6	54	87.027	ENSRNOG00000006380	Srsf6	54	85.326	Rattus_norvegicus
ENSPMEG00000006042	SRSF6	54	85.405	ENSRBIG00000041414	SRSF6	60	92.308	Rhinopithecus_bieti
ENSPMEG00000006042	SRSF6	54	87.027	ENSRROG00000029989	SRSF6	58	92.308	Rhinopithecus_roxellana
ENSPMEG00000006042	SRSF6	54	87.027	ENSSBOG00000033708	-	58	92.308	Saimiri_boliviensis_boliviensis
ENSPMEG00000006042	SRSF6	53	70.330	ENSSBOG00000034078	-	54	69.780	Saimiri_boliviensis_boliviensis
ENSPMEG00000006042	SRSF6	54	87.568	ENSSHAG00000012805	SRSF6	54	87.500	Sarcophilus_harrisii
ENSPMEG00000006042	SRSF6	94	71.714	ENSSFOG00015019681	-	53	82.902	Scleropages_formosus
ENSPMEG00000006042	SRSF6	70	74.380	ENSSMAG00000014819	-	83	72.973	Scophthalmus_maximus
ENSPMEG00000006042	SRSF6	53	80.328	ENSSMAG00000017447	-	55	81.421	Scophthalmus_maximus
ENSPMEG00000006042	SRSF6	53	96.757	ENSSDUG00000016097	srsf6a	94	82.282	Seriola_dumerili
ENSPMEG00000006042	SRSF6	94	76.364	ENSSLDG00000022841	srsf6a	94	82.282	Seriola_lalandi_dorsalis
ENSPMEG00000006042	SRSF6	53	87.500	ENSSPUG00000004967	SRSF6	58	94.872	Sphenodon_punctatus
ENSPMEG00000006042	SRSF6	91	83.333	ENSSPAG00000002362	srsf6a	86	78.378	Stegastes_partitus
ENSPMEG00000006042	SRSF6	54	87.027	ENSSSCG00000007362	SRSF6	61	85.326	Sus_scrofa
ENSPMEG00000006042	SRSF6	53	88.043	ENSTGUG00000003455	SRSF6	89	67.089	Taeniopygia_guttata
ENSPMEG00000006042	SRSF6	92	73.981	ENSTNIG00000001692	srsf6a	56	90.811	Tetraodon_nigroviridis
ENSPMEG00000006042	SRSF6	54	87.027	ENSUAMG00000003559	SRSF6	58	93.590	Ursus_americanus
ENSPMEG00000006042	SRSF6	100	94.186	ENSXMAG00000021849	srsf6a	100	94.186	Xiphophorus_maculatus