EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000006278 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 1080 bases
Position: chrLMXC01027347.1:63184-64263
Accession: 106908166
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000004947	RRM_1	PF00076.22	9.7e-33	1	2
ENSPMEP00000004947	RRM_1	PF00076.22	9.7e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000008323	-	474	XM_014974161	ENSPMEP00000004947	157 (aa)	XP_014829647	-

Gene Model

Click here to download ENSPMEG00000006278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000006278	-	93	49.275	ENSPMEG00000024260	rbm4.3	62	49.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006278	-	88	76.812	ENSAPOG00000012375	-	95	76.812	Acanthochromis_polyacanthus
ENSPMEG00000006278	-	93	76.510	ENSACIG00000016472	-	91	76.510	Amphilophus_citrinellus
ENSPMEG00000006278	-	88	76.812	ENSAOCG00000010907	-	95	76.812	Amphiprion_ocellaris
ENSPMEG00000006278	-	90	76.056	ENSAPEG00000009476	-	88	76.056	Amphiprion_percula
ENSPMEG00000006278	-	92	75.172	ENSATEG00000001912	-	95	75.172	Anabas_testudineus
ENSPMEG00000006278	-	88	56.522	ENSAMXG00000032121	rbm4.2	87	56.522	Astyanax_mexicanus
ENSPMEG00000006278	-	96	50.725	ENSCPBG00000023666	-	92	50.725	Chrysemys_picta_bellii
ENSPMEG00000006278	-	88	68.116	ENSCSEG00000007739	-	99	68.116	Cynoglossus_semilaevis
ENSPMEG00000006278	-	94	66.234	ENSDARG00000036386	rbm4.1	88	66.234	Danio_rerio
ENSPMEG00000006278	-	92	54.362	ENSEBUG00000007174	-	88	54.362	Eptatretus_burgeri
ENSPMEG00000006278	-	88	83.333	ENSFHEG00000003483	-	91	83.333	Fundulus_heteroclitus
ENSPMEG00000006278	-	88	95.652	ENSGAFG00000019301	-	91	95.652	Gambusia_affinis
ENSPMEG00000006278	-	96	50.725	ENSGAGG00000014558	-	92	50.725	Gopherus_agassizii
ENSPMEG00000006278	-	88	80.435	ENSHBUG00000011624	-	91	80.435	Haplochromis_burtoni
ENSPMEG00000006278	-	88	78.261	ENSHCOG00000011413	-	81	78.261	Hippocampus_comes
ENSPMEG00000006278	-	88	78.986	ENSLBEG00000019756	-	86	78.986	Labrus_bergylta
ENSPMEG00000006278	-	96	55.970	ENSLACG00000006343	zgc:77262	56	55.970	Latimeria_chalumnae
ENSPMEG00000006278	-	88	62.319	ENSLOCG00000002772	rbm4.1	94	62.319	Lepisosteus_oculatus
ENSPMEG00000006278	-	92	55.172	ENSMZEG00005028161	-	80	55.172	Maylandia_zebra
ENSPMEG00000006278	-	94	69.799	ENSMZEG00005009210	-	84	69.799	Maylandia_zebra
ENSPMEG00000006278	-	87	81.022	ENSMZEG00005028160	-	93	81.022	Maylandia_zebra
ENSPMEG00000006278	-	88	80.435	ENSMMOG00000020484	-	86	80.435	Mola_mola
ENSPMEG00000006278	-	88	79.710	ENSNBRG00000017763	-	90	79.710	Neolamprologus_brichardi
ENSPMEG00000006278	-	88	68.841	ENSPKIG00000020805	rbm4.1	85	68.841	Paramormyrops_kingsleyae
ENSPMEG00000006278	-	88	70.290	ENSPMGG00000004331	rbm4.1	92	70.290	Periophthalmus_magnuspinnatus
ENSPMEG00000006278	-	87	51.095	ENSPMAG00000003433	rbm4.2	73	51.095	Petromyzon_marinus
ENSPMEG00000006278	-	90	97.887	ENSPFOG00000012685	-	59	97.887	Poecilia_formosa
ENSPMEG00000006278	-	100	100.000	ENSPLAG00000018569	-	100	100.000	Poecilia_latipinna
ENSPMEG00000006278	-	88	97.826	ENSPREG00000003764	-	60	97.826	Poecilia_reticulata
ENSPMEG00000006278	-	88	80.435	ENSPNYG00000004649	-	90	80.435	Pundamilia_nyererei
ENSPMEG00000006278	-	85	54.386	ENSSFOG00015018567	zgc:77262	89	54.386	Scleropages_formosus
ENSPMEG00000006278	-	91	75.676	ENSSMAG00000007575	-	95	75.676	Scophthalmus_maximus
ENSPMEG00000006278	-	88	97.826	ENSXCOG00000003730	-	86	97.826	Xiphophorus_couchianus
ENSPMEG00000006278	-	90	96.479	ENSXMAG00000008059	-	59	96.479	Xiphophorus_maculatus