EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000006335 (Gene tree)
Gene ID: 106926969
Gene Symbol: sall2
Alias: -
Full Name: sal-like protein 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 11780 bases
Position: chrKQ551892.1:335684-347463
Accession: 106926969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000005002	zf-C2H2	PF00096.26	6.6e-16	1	2
ENSPMEP00000005002	zf-C2H2	PF00096.26	6.6e-16	2	2
ENSPMEP00000005008	zf-C2H2	PF00096.26	6.6e-16	1	2
ENSPMEP00000005008	zf-C2H2	PF00096.26	6.6e-16	2	2
ENSPMEP00000024197	zf-C2H2	PF00096.26	6.6e-16	1	2
ENSPMEP00000024197	zf-C2H2	PF00096.26	6.6e-16	2	2
ENSPMEP00000005002	zf-met	PF12874.7	8.1e-09	1	2
ENSPMEP00000005002	zf-met	PF12874.7	8.1e-09	2	2
ENSPMEP00000005008	zf-met	PF12874.7	8.1e-09	1	2
ENSPMEP00000005008	zf-met	PF12874.7	8.1e-09	2	2
ENSPMEP00000024197	zf-met	PF12874.7	8.1e-09	1	2
ENSPMEP00000024197	zf-met	PF12874.7	8.1e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000008235	-	5984	XM_015002203	ENSPMEP00000024197	1252 (aa)	XP_014857689	UPI00072EA5EC
ENSPMET00000008219	-	6225	XM_015002202	ENSPMEP00000005002	1252 (aa)	XP_014857688	UPI00072EA5EC
ENSPMET00000008226	-	6164	XM_015002201	ENSPMEP00000005008	1252 (aa)	XP_014857687	UPI00072EA5EC

Gene Model

Click here to download ENSPMEG00000006335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000006335	sall2	58	46.947	ENSPMEG00000016395	si:ch211-212k18.5	56	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006335	sall2	100	69.243	ENSAPOG00000015347	sall2	90	68.072	Acanthochromis_polyacanthus
ENSPMEG00000006335	sall2	59	47.190	ENSACIG00000019922	si:ch211-212k18.5	68	45.977	Amphilophus_citrinellus
ENSPMEG00000006335	sall2	100	69.945	ENSAOCG00000016559	sall2	90	68.384	Amphiprion_ocellaris
ENSPMEG00000006335	sall2	71	73.018	ENSAPEG00000020215	sall2	100	72.137	Amphiprion_percula
ENSPMEG00000006335	sall2	58	45.953	ENSATEG00000001254	si:ch211-212k18.5	71	47.165	Anabas_testudineus
ENSPMEG00000006335	sall2	100	64.816	ENSATEG00000007303	sall2	100	63.018	Anabas_testudineus
ENSPMEG00000006335	sall2	60	47.266	ENSACLG00000009709	si:ch211-212k18.5	58	59.184	Astatotilapia_calliptera
ENSPMEG00000006335	sall2	99	67.722	ENSACLG00000019867	sall2	100	66.123	Astatotilapia_calliptera
ENSPMEG00000006335	sall2	69	57.407	ENSAMXG00000010979	si:ch211-212k18.5	60	81.250	Astyanax_mexicanus
ENSPMEG00000006335	sall2	99	43.053	ENSAMXG00000020956	sall2	94	42.661	Astyanax_mexicanus
ENSPMEG00000006335	sall2	99	58.141	ENSCSEG00000021148	sall2	88	57.765	Cynoglossus_semilaevis
ENSPMEG00000006335	sall2	54	48.718	ENSCSEG00000004426	si:ch211-212k18.5	60	57.407	Cynoglossus_semilaevis
ENSPMEG00000006335	sall2	100	81.235	ENSCVAG00000006032	sall2	100	79.335	Cyprinodon_variegatus
ENSPMEG00000006335	sall2	94	43.186	ENSDARG00000075116	sall2	92	42.435	Danio_rerio
ENSPMEG00000006335	sall2	68	63.158	ENSDARG00000103316	si:ch211-212k18.5	58	63.158	Danio_rerio
ENSPMEG00000006335	sall2	93	51.586	ENSELUG00000004389	sall2	87	53.090	Esox_lucius
ENSPMEG00000006335	sall2	60	44.591	ENSELUG00000024534	si:ch211-212k18.5	56	44.149	Esox_lucius
ENSPMEG00000006335	sall2	100	85.250	ENSFHEG00000017550	sall2	100	84.615	Fundulus_heteroclitus
ENSPMEG00000006335	sall2	59	44.914	ENSFHEG00000017264	si:ch211-212k18.5	58	67.647	Fundulus_heteroclitus
ENSPMEG00000006335	sall2	100	94.657	ENSGAFG00000015194	sall2	100	93.381	Gambusia_affinis
ENSPMEG00000006335	sall2	61	69.697	ENSGAFG00000003746	si:ch211-212k18.5	62	47.326	Gambusia_affinis
ENSPMEG00000006335	sall2	60	47.135	ENSHBUG00000019672	si:ch211-212k18.5	58	59.184	Haplochromis_burtoni
ENSPMEG00000006335	sall2	99	67.642	ENSHBUG00000002882	sall2	90	66.045	Haplochromis_burtoni
ENSPMEG00000006335	sall2	62	60.976	ENSIPUG00000002559	sall2	53	46.205	Ictalurus_punctatus
ENSPMEG00000006335	sall2	99	69.436	ENSKMAG00000020172	sall2	99	69.044	Kryptolebias_marmoratus
ENSPMEG00000006335	sall2	52	76.923	ENSLBEG00000020887	si:ch211-212k18.5	57	70.588	Labrus_bergylta
ENSPMEG00000006335	sall2	99	66.615	ENSMAMG00000016229	sall2	99	65.367	Mastacembelus_armatus
ENSPMEG00000006335	sall2	59	45.897	ENSMAMG00000015887	si:ch211-212k18.5	76	46.597	Mastacembelus_armatus
ENSPMEG00000006335	sall2	60	47.266	ENSMZEG00005021214	si:ch211-212k18.5	58	59.184	Maylandia_zebra
ENSPMEG00000006335	sall2	99	67.722	ENSMZEG00005012103	sall2	90	66.123	Maylandia_zebra
ENSPMEG00000006335	sall2	52	50.847	ENSMMOG00000012726	si:ch211-212k18.5	65	51.724	Mola_mola
ENSPMEG00000006335	sall2	58	44.664	ENSMALG00000000979	si:ch211-212k18.5	55	46.134	Monopterus_albus
ENSPMEG00000006335	sall2	91	59.364	ENSNBRG00000017645	sall2	88	59.410	Neolamprologus_brichardi
ENSPMEG00000006335	sall2	60	45.396	ENSNBRG00000023948	si:ch211-212k18.5	54	46.235	Neolamprologus_brichardi
ENSPMEG00000006335	sall2	99	62.902	ENSORLG00000026871	sall2	99	62.745	Oryzias_latipes
ENSPMEG00000006335	sall2	59	45.065	ENSORLG00000030429	si:ch211-212k18.5	59	55.102	Oryzias_latipes
ENSPMEG00000006335	sall2	59	45.254	ENSORLG00020008145	si:ch211-212k18.5	59	55.769	Oryzias_latipes_hni
ENSPMEG00000006335	sall2	99	62.824	ENSORLG00020007873	sall2	99	62.824	Oryzias_latipes_hni
ENSPMEG00000006335	sall2	59	44.819	ENSORLG00015004982	si:ch211-212k18.5	59	54.717	Oryzias_latipes_hsok
ENSPMEG00000006335	sall2	99	62.902	ENSORLG00015002422	sall2	99	62.745	Oryzias_latipes_hsok
ENSPMEG00000006335	sall2	99	62.637	ENSOMEG00000012904	sall2	99	62.794	Oryzias_melastigma
ENSPMEG00000006335	sall2	59	44.444	ENSOMEG00000013949	si:ch211-212k18.5	58	58.000	Oryzias_melastigma
ENSPMEG00000006335	sall2	72	49.043	ENSPKIG00000009207	sall2	84	42.388	Paramormyrops_kingsleyae
ENSPMEG00000006335	sall2	67	42.509	ENSPMGG00000018714	si:ch211-212k18.5	61	45.849	Periophthalmus_magnuspinnatus
ENSPMEG00000006335	sall2	58	46.947	ENSPFOG00000023705	si:ch211-212k18.5	56	66.667	Poecilia_formosa
ENSPMEG00000006335	sall2	100	99.281	ENSPFOG00000016504	sall2	100	99.281	Poecilia_formosa
ENSPMEG00000006335	sall2	100	98.882	ENSPLAG00000018320	sall2	100	98.882	Poecilia_latipinna
ENSPMEG00000006335	sall2	58	46.955	ENSPLAG00000002577	si:ch211-212k18.5	57	66.667	Poecilia_latipinna
ENSPMEG00000006335	sall2	51	49.153	ENSPREG00000005292	si:ch211-212k18.5	75	47.067	Poecilia_reticulata
ENSPMEG00000006335	sall2	100	97.524	ENSPREG00000021908	sall2	100	97.524	Poecilia_reticulata
ENSPMEG00000006335	sall2	50	70.000	ENSPNAG00000006123	si:ch211-212k18.5	57	70.000	Pygocentrus_nattereri
ENSPMEG00000006335	sall2	98	42.027	ENSPNAG00000021463	sall2	94	40.943	Pygocentrus_nattereri
ENSPMEG00000006335	sall2	99	66.799	ENSSMAG00000014157	sall2	90	65.156	Scophthalmus_maximus
ENSPMEG00000006335	sall2	59	45.893	ENSSDUG00000006164	si:ch211-212k18.5	56	63.415	Seriola_dumerili
ENSPMEG00000006335	sall2	99	68.833	ENSSDUG00000012274	sall2	90	67.189	Seriola_dumerili
ENSPMEG00000006335	sall2	59	46.563	ENSSLDG00000003393	si:ch211-212k18.5	57	57.778	Seriola_lalandi_dorsalis
ENSPMEG00000006335	sall2	99	68.363	ENSSLDG00000001653	sall2	90	66.719	Seriola_lalandi_dorsalis
ENSPMEG00000006335	sall2	100	70.226	ENSSPAG00000023009	sall2	90	68.589	Stegastes_partitus
ENSPMEG00000006335	sall2	99	57.874	ENSTRUG00000024556	sall2	98	56.974	Takifugu_rubripes
ENSPMEG00000006335	sall2	87	54.724	ENSTNIG00000007934	sall2	96	53.014	Tetraodon_nigroviridis
ENSPMEG00000006335	sall2	51	49.153	ENSXCOG00000000762	si:ch211-212k18.5	55	66.667	Xiphophorus_couchianus
ENSPMEG00000006335	sall2	100	96.335	ENSXMAG00000000902	sall2	100	96.335	Xiphophorus_maculatus