EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000006371 (Gene tree)
Gene ID: 106925733
Gene Symbol: -
Alias: -
Full Name: trinucleotide repeat-containing gene 6B protein-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 21584 bases
Position: chrKQ551781.1:136728-158311
Accession: 106925733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000004877	Ago_hook	PF10427.9	8.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000008342	-	8692	XM_015000203	ENSPMEP00000004927	1878 (aa)	XP_014855689	UPI00072DE6D8
ENSPMET00000008443	-	4500	-	ENSPMEP00000004877	1499 (aa)	-	-
ENSPMET00000008321	-	8812	XM_015000202	ENSPMEP00000024166	1918 (aa)	XP_014855688	UPI00072DF842
ENSPMET00000008358	-	8671	-	ENSPMEP00000004918	1871 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000006371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006371	-	61	59.516	ENSG00000100354	TNRC6B	69	78.788	Homo_sapiens
ENSPMEG00000006371	-	91	53.810	ENSAPLG00000009347	TNRC6B	64	53.431	Anas_platyrhynchos
ENSPMEG00000006371	-	68	54.739	ENSANAG00000035042	TNRC6B	69	78.788	Aotus_nancymaae
ENSPMEG00000006371	-	60	63.043	ENSAMXG00000008707	tnrc6b	87	51.277	Astyanax_mexicanus
ENSPMEG00000006371	-	90	54.502	ENSBTAG00000021076	TNRC6B	56	53.808	Bos_taurus
ENSPMEG00000006371	-	56	54.739	ENSCAFG00000001255	TNRC6B	71	54.054	Canis_familiaris
ENSPMEG00000006371	-	58	49.517	ENSCAFG00020002189	TNRC6B	73	60.065	Canis_lupus_dingo
ENSPMEG00000006371	-	94	54.739	ENSCHIG00000003491	TNRC6B	56	54.054	Capra_hircus
ENSPMEG00000006371	-	84	54.976	ENSTSYG00000011836	TNRC6B	71	78.788	Carlito_syrichta
ENSPMEG00000006371	-	84	54.502	ENSCPOG00000005705	TNRC6B	78	53.808	Cavia_porcellus
ENSPMEG00000006371	-	83	50.595	ENSCPBG00000022932	TNRC6B	79	50.595	Chrysemys_picta_bellii
ENSPMEG00000006371	-	90	54.353	ENSDNOG00000012744	TNRC6B	63	53.415	Dasypus_novemcinctus
ENSPMEG00000006371	-	90	36.493	ENSETEG00000006570	TNRC6B	78	45.283	Echinops_telfairi
ENSPMEG00000006371	-	94	54.739	ENSEASG00005005306	TNRC6B	72	60.390	Equus_asinus_asinus
ENSPMEG00000006371	-	91	54.028	ENSGALG00000012050	TNRC6B	77	53.563	Gallus_gallus
ENSPMEG00000006371	-	90	52.983	ENSGAGG00000025188	TNRC6B	77	53.465	Gopherus_agassizii
ENSPMEG00000006371	-	93	54.739	ENSGGOG00000008444	TNRC6B	69	78.788	Gorilla_gorilla
ENSPMEG00000006371	-	72	65.257	ENSIPUG00000001515	tnrc6b	67	66.465	Ictalurus_punctatus
ENSPMEG00000006371	-	90	54.502	ENSSTOG00000008927	TNRC6B	77	53.563	Ictidomys_tridecemlineatus
ENSPMEG00000006371	-	87	44.103	ENSLACG00000000628	-	50	49.254	Latimeria_chalumnae
ENSPMEG00000006371	-	68	55.213	ENSLAFG00000014473	TNRC6B	83	55.450	Loxodonta_africana
ENSPMEG00000006371	-	90	54.028	ENSMAUG00000016123	Tnrc6b	77	53.071	Mesocricetus_auratus
ENSPMEG00000006371	-	84	54.739	ENSMICG00000014056	TNRC6B	71	78.788	Microcebus_murinus
ENSPMEG00000006371	-	54	93.548	ENSMMOG00000002799	si:dkey-217f16.6	83	94.286	Mola_mola
ENSPMEG00000006371	-	68	54.265	MGP_CAROLIEiJ_G0020043	Tnrc6b	76	53.317	Mus_caroli
ENSPMEG00000006371	-	68	54.265	ENSMUSG00000047888	Tnrc6b	76	53.317	Mus_musculus
ENSPMEG00000006371	-	68	54.265	MGP_SPRETEiJ_G0020941	Tnrc6b	76	53.317	Mus_spretus
ENSPMEG00000006371	-	68	54.225	ENSNGAG00000021294	Tnrc6b	76	53.285	Nannospalax_galili
ENSPMEG00000006371	-	67	54.739	ENSNLEG00000015311	TNRC6B	69	78.788	Nomascus_leucogenys
ENSPMEG00000006371	-	77	56.429	ENSOPRG00000012054	TNRC6B	70	56.376	Ochotona_princeps
ENSPMEG00000006371	-	90	54.739	ENSOARG00000017238	TNRC6B	76	54.054	Ovis_aries
ENSPMEG00000006371	-	56	54.502	ENSPPRG00000017741	TNRC6B	71	67.470	Panthera_pardus
ENSPMEG00000006371	-	59	51.544	ENSPTIG00000022064	TNRC6B	72	78.788	Panthera_tigris_altaica
ENSPMEG00000006371	-	91	42.963	ENSPANG00000009271	TNRC6B	77	78.788	Papio_anubis
ENSPMEG00000006371	-	90	53.349	ENSPSIG00000005318	TNRC6B	78	53.846	Pelodiscus_sinensis
ENSPMEG00000006371	-	68	54.524	ENSPCIG00000020347	TNRC6B	79	53.598	Phascolarctos_cinereus
ENSPMEG00000006371	-	93	89.000	ENSPFOG00000006033	-	85	89.000	Poecilia_formosa
ENSPMEG00000006371	-	95	84.272	ENSPLAG00000001418	-	87	84.471	Poecilia_latipinna
ENSPMEG00000006371	-	52	49.409	ENSPCAG00000008739	TNRC6B	50	49.645	Procavia_capensis
ENSPMEG00000006371	-	84	54.739	ENSPCOG00000020790	TNRC6B	71	78.788	Propithecus_coquereli
ENSPMEG00000006371	-	90	70.164	ENSPNAG00000011713	tnrc6b	77	70.395	Pygocentrus_nattereri
ENSPMEG00000006371	-	85	60.390	ENSRNOG00000024907	Tnrc6b	58	60.390	Rattus_norvegicus
ENSPMEG00000006371	-	86	54.028	ENSSHAG00000009692	TNRC6B	58	54.020	Sarcophilus_harrisii
ENSPMEG00000006371	-	64	54.502	ENSSPUG00000010801	TNRC6B	72	54.054	Sphenodon_punctatus
ENSPMEG00000006371	-	51	60.726	ENSTGUG00000010138	-	77	60.726	Taeniopygia_guttata
ENSPMEG00000006371	-	87	54.869	ENSTTRG00000011465	TNRC6B	72	54.187	Tursiops_truncatus
ENSPMEG00000006371	-	59	54.739	ENSUAMG00000007174	TNRC6B	78	54.054	Ursus_americanus
ENSPMEG00000006371	-	56	54.739	ENSVVUG00000007064	TNRC6B	88	44.404	Vulpes_vulpes
ENSPMEG00000006371	-	84	94.425	ENSXCOG00000003042	-	90	94.425	Xiphophorus_couchianus