EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000006448 (Gene tree)
Gene ID: 106923106
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein MEX3B-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 16095 bases
Position: chrKQ551584.1:272987-289081
Accession: 106923106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000024256	KH_1	PF00013.29	8.5e-26	1	2
ENSPMEP00000024256	KH_1	PF00013.29	8.5e-26	2	2
ENSPMEP00000005104	KH_1	PF00013.29	1.7e-25	1	2
ENSPMEP00000005104	KH_1	PF00013.29	1.7e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000008063	-	7021	XM_014995993	ENSPMEP00000005104	680 (aa)	XP_014851479	UPI00072DD0DD
ENSPMET00000008089	-	1542	-	ENSPMEP00000024256	513 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000006448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000006448	-	91	48.057	ENSPMEG00000009307	MEX3D	79	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006448	-	59	69.145	ENSG00000183496	MEX3B	55	70.111	Homo_sapiens
ENSPMEG00000006448	-	88	55.844	ENSAPOG00000006457	mex3b	97	54.329	Acanthochromis_polyacanthus
ENSPMEG00000006448	-	99	82.684	ENSAPOG00000024248	-	100	82.973	Acanthochromis_polyacanthus
ENSPMEG00000006448	-	54	65.000	ENSAMEG00000006037	MEX3B	54	68.817	Ailuropoda_melanoleuca
ENSPMEG00000006448	-	88	55.794	ENSACIG00000017783	mex3b	89	53.680	Amphilophus_citrinellus
ENSPMEG00000006448	-	96	69.781	ENSACIG00000005655	-	95	67.372	Amphilophus_citrinellus
ENSPMEG00000006448	-	88	54.762	ENSAOCG00000023903	mex3b	91	51.282	Amphiprion_ocellaris
ENSPMEG00000006448	-	99	82.540	ENSAOCG00000021347	-	100	83.117	Amphiprion_ocellaris
ENSPMEG00000006448	-	99	82.395	ENSAPEG00000003579	-	100	82.973	Amphiprion_percula
ENSPMEG00000006448	-	88	55.195	ENSAPEG00000000263	mex3b	87	54.762	Amphiprion_percula
ENSPMEG00000006448	-	99	75.867	ENSATEG00000015187	-	100	76.734	Anabas_testudineus
ENSPMEG00000006448	-	88	54.150	ENSATEG00000012352	mex3b	91	50.462	Anabas_testudineus
ENSPMEG00000006448	-	56	68.050	ENSACAG00000011072	MEX3B	50	79.444	Anolis_carolinensis
ENSPMEG00000006448	-	99	77.680	ENSACLG00000017634	-	100	78.708	Astatotilapia_calliptera
ENSPMEG00000006448	-	88	52.756	ENSACLG00000025776	mex3b	91	51.272	Astatotilapia_calliptera
ENSPMEG00000006448	-	88	54.065	ENSAMXG00000033615	mex3b	90	51.619	Astyanax_mexicanus
ENSPMEG00000006448	-	59	68.773	ENSBTAG00000052904	MEX3B	53	69.742	Bos_taurus
ENSPMEG00000006448	-	59	66.429	ENSCJAG00000008043	MEX3B	56	67.376	Callithrix_jacchus
ENSPMEG00000006448	-	59	68.773	ENSCHIG00000019863	MEX3B	54	69.742	Capra_hircus
ENSPMEG00000006448	-	59	69.145	ENSCATG00000030784	MEX3B	55	70.111	Cercocebus_atys
ENSPMEG00000006448	-	59	69.145	ENSCSAG00000015153	MEX3B	55	70.111	Chlorocebus_sabaeus
ENSPMEG00000006448	-	88	50.394	ENSCPBG00000007809	MEX3B	89	52.390	Chrysemys_picta_bellii
ENSPMEG00000006448	-	59	69.145	ENSCANG00000034524	MEX3B	71	70.111	Colobus_angolensis_palliatus
ENSPMEG00000006448	-	59	69.145	ENSCGRG00001016198	Mex3b	55	70.111	Cricetulus_griseus_chok1gshd
ENSPMEG00000006448	-	56	66.942	ENSCGRG00000018461	Mex3b	59	68.033	Cricetulus_griseus_crigri
ENSPMEG00000006448	-	92	50.095	ENSCSEG00000005852	mex3b	89	51.860	Cynoglossus_semilaevis
ENSPMEG00000006448	-	99	64.368	ENSCSEG00000011533	-	99	63.722	Cynoglossus_semilaevis
ENSPMEG00000006448	-	87	74.752	ENSCSEG00000006809	-	90	74.043	Cynoglossus_semilaevis
ENSPMEG00000006448	-	100	88.106	ENSCVAG00000006043	-	100	87.665	Cyprinodon_variegatus
ENSPMEG00000006448	-	88	55.110	ENSDARG00000058369	mex3b	90	54.234	Danio_rerio
ENSPMEG00000006448	-	59	68.889	ENSDNOG00000043628	MEX3B	56	69.853	Dasypus_novemcinctus
ENSPMEG00000006448	-	88	51.782	ENSEBUG00000007080	mex3b	89	58.309	Eptatretus_burgeri
ENSPMEG00000006448	-	74	73.462	ENSEBUG00000013015	mex3b	68	73.643	Eptatretus_burgeri
ENSPMEG00000006448	-	59	70.073	ENSEASG00005007105	MEX3B	55	68.978	Equus_asinus_asinus
ENSPMEG00000006448	-	59	65.870	ENSECAG00000013497	MEX3B	56	64.846	Equus_caballus
ENSPMEG00000006448	-	59	71.161	ENSELUG00000002503	mex3b	91	50.295	Esox_lucius
ENSPMEG00000006448	-	59	71.212	ENSFALG00000011102	MEX3B	54	70.076	Ficedula_albicollis
ENSPMEG00000006448	-	59	69.517	ENSFDAG00000018452	MEX3B	79	70.480	Fukomys_damarensis
ENSPMEG00000006448	-	99	88.029	ENSFHEG00000022740	-	100	89.051	Fundulus_heteroclitus
ENSPMEG00000006448	-	88	68.660	ENSGMOG00000005826	-	100	69.291	Gadus_morhua
ENSPMEG00000006448	-	75	71.483	ENSGALG00000032984	MEX3B	92	50.877	Gallus_gallus
ENSPMEG00000006448	-	94	97.966	ENSGAFG00000013694	-	98	97.966	Gambusia_affinis
ENSPMEG00000006448	-	88	70.428	ENSGACG00000007490	-	100	72.285	Gasterosteus_aculeatus
ENSPMEG00000006448	-	88	52.664	ENSGAGG00000022839	MEX3B	89	53.279	Gopherus_agassizii
ENSPMEG00000006448	-	59	69.145	ENSGGOG00000000597	MEX3B	55	70.111	Gorilla_gorilla
ENSPMEG00000006448	-	88	52.559	ENSHBUG00000022683	mex3b	91	51.076	Haplochromis_burtoni
ENSPMEG00000006448	-	99	77.924	ENSHBUG00000010552	-	100	78.947	Haplochromis_burtoni
ENSPMEG00000006448	-	59	69.517	ENSHGLG00000012504	MEX3B	55	70.480	Heterocephalus_glaber_female
ENSPMEG00000006448	-	59	69.517	ENSHGLG00100008208	MEX3B	58	70.480	Heterocephalus_glaber_male
ENSPMEG00000006448	-	99	67.100	ENSHCOG00000010812	-	100	67.100	Hippocampus_comes
ENSPMEG00000006448	-	88	52.818	ENSHCOG00000007290	mex3b	63	71.591	Hippocampus_comes
ENSPMEG00000006448	-	88	51.107	ENSIPUG00000023356	mex3b	90	51.837	Ictalurus_punctatus
ENSPMEG00000006448	-	59	69.145	ENSSTOG00000006738	MEX3B	52	70.111	Ictidomys_tridecemlineatus
ENSPMEG00000006448	-	59	69.145	ENSJJAG00000015411	Mex3b	54	70.111	Jaculus_jaculus
ENSPMEG00000006448	-	100	82.895	ENSKMAG00000021181	MEX3B	100	83.576	Kryptolebias_marmoratus
ENSPMEG00000006448	-	87	74.959	ENSLBEG00000007607	-	92	75.407	Labrus_bergylta
ENSPMEG00000006448	-	91	50.407	ENSLBEG00000015131	mex3b	80	65.116	Labrus_bergylta
ENSPMEG00000006448	-	88	51.829	ENSLACG00000015887	MEX3B	90	51.052	Latimeria_chalumnae
ENSPMEG00000006448	-	88	52.684	ENSLOCG00000012858	mex3b	90	51.277	Lepisosteus_oculatus
ENSPMEG00000006448	-	75	64.236	ENSLAFG00000006027	MEX3B	95	83.838	Loxodonta_africana
ENSPMEG00000006448	-	66	64.026	ENSMFAG00000037608	MEX3B	55	70.111	Macaca_fascicularis
ENSPMEG00000006448	-	66	61.783	ENSMMUG00000018639	MEX3B	56	67.376	Macaca_mulatta
ENSPMEG00000006448	-	66	64.026	ENSMNEG00000043420	MEX3B	55	70.111	Macaca_nemestrina
ENSPMEG00000006448	-	88	50.870	ENSMLEG00000037832	MEX3B	50	69.176	Mandrillus_leucophaeus
ENSPMEG00000006448	-	99	77.292	ENSMAMG00000001370	-	100	78.561	Mastacembelus_armatus
ENSPMEG00000006448	-	88	54.851	ENSMAMG00000011325	mex3b	91	51.796	Mastacembelus_armatus
ENSPMEG00000006448	-	88	52.559	ENSMZEG00005003082	mex3b	91	51.076	Maylandia_zebra
ENSPMEG00000006448	-	99	77.680	ENSMZEG00005004908	-	100	78.708	Maylandia_zebra
ENSPMEG00000006448	-	59	69.145	ENSMAUG00000001211	Mex3b	55	70.111	Mesocricetus_auratus
ENSPMEG00000006448	-	59	69.145	ENSMOCG00000019726	Mex3b	55	70.111	Microtus_ochrogaster
ENSPMEG00000006448	-	99	76.413	ENSMMOG00000000120	-	99	76.998	Mola_mola
ENSPMEG00000006448	-	85	52.869	ENSMMOG00000015373	mex3b	88	51.844	Mola_mola
ENSPMEG00000006448	-	63	84.772	ENSMODG00000019387	MEX3B	67	69.597	Monodelphis_domestica
ENSPMEG00000006448	-	88	51.992	ENSMALG00000010929	mex3b	56	72.031	Monopterus_albus
ENSPMEG00000006448	-	86	77.907	ENSMALG00000009589	-	92	78.808	Monopterus_albus
ENSPMEG00000006448	-	81	69.145	MGP_CAROLIEiJ_G0029937	Mex3b	69	70.111	Mus_caroli
ENSPMEG00000006448	-	81	69.145	ENSMUSG00000057706	Mex3b	69	70.111	Mus_musculus
ENSPMEG00000006448	-	81	69.145	MGP_PahariEiJ_G0013158	Mex3b	69	70.111	Mus_pahari
ENSPMEG00000006448	-	81	68.773	MGP_SPRETEiJ_G0031039	Mex3b	69	69.742	Mus_spretus
ENSPMEG00000006448	-	59	69.145	ENSNGAG00000010102	Mex3b	55	70.111	Nannospalax_galili
ENSPMEG00000006448	-	88	52.559	ENSNBRG00000000526	mex3b	89	51.076	Neolamprologus_brichardi
ENSPMEG00000006448	-	98	73.735	ENSNBRG00000012485	-	97	73.346	Neolamprologus_brichardi
ENSPMEG00000006448	-	59	64.074	ENSNLEG00000036285	MEX3B	55	65.074	Nomascus_leucogenys
ENSPMEG00000006448	-	50	80.476	ENSOPRG00000009604	MEX3B	61	67.361	Ochotona_princeps
ENSPMEG00000006448	-	88	52.559	ENSONIG00000003391	mex3b	91	51.076	Oreochromis_niloticus
ENSPMEG00000006448	-	98	75.665	ENSONIG00000015037	-	99	77.297	Oreochromis_niloticus
ENSPMEG00000006448	-	88	49.130	ENSOCUG00000011603	MEX3B	91	49.126	Oryctolagus_cuniculus
ENSPMEG00000006448	-	99	79.595	ENSORLG00000004985	-	100	79.305	Oryzias_latipes
ENSPMEG00000006448	-	99	79.942	ENSORLG00020020174	-	100	80.233	Oryzias_latipes_hni
ENSPMEG00000006448	-	99	80.087	ENSORLG00015008649	-	100	80.378	Oryzias_latipes_hsok
ENSPMEG00000006448	-	99	81.541	ENSOMEG00000023339	-	100	81.831	Oryzias_melastigma
ENSPMEG00000006448	-	59	69.145	ENSPPAG00000020407	MEX3B	56	70.111	Pan_paniscus
ENSPMEG00000006448	-	59	69.145	ENSPTRG00000007373	MEX3B	55	70.111	Pan_troglodytes
ENSPMEG00000006448	-	59	69.145	ENSPANG00000015634	MEX3B	55	70.111	Papio_anubis
ENSPMEG00000006448	-	88	53.069	ENSPKIG00000018385	mex3b	93	50.680	Paramormyrops_kingsleyae
ENSPMEG00000006448	-	88	54.945	ENSPKIG00000019969	-	95	54.405	Paramormyrops_kingsleyae
ENSPMEG00000006448	-	99	70.923	ENSPMGG00000017559	-	92	70.530	Periophthalmus_magnuspinnatus
ENSPMEG00000006448	-	88	54.832	ENSPMGG00000015808	mex3b	50	69.084	Periophthalmus_magnuspinnatus
ENSPMEG00000006448	-	88	42.105	ENSPMAG00000000125	mex3b	99	41.257	Petromyzon_marinus
ENSPMEG00000006448	-	100	99.559	ENSPFOG00000018999	-	100	99.559	Poecilia_formosa
ENSPMEG00000006448	-	100	99.265	ENSPLAG00000002303	-	100	99.265	Poecilia_latipinna
ENSPMEG00000006448	-	100	97.357	ENSPREG00000018559	-	100	97.357	Poecilia_reticulata
ENSPMEG00000006448	-	99	77.778	ENSPNYG00000010418	-	100	78.801	Pundamilia_nyererei
ENSPMEG00000006448	-	88	52.559	ENSPNYG00000019384	mex3b	88	51.076	Pundamilia_nyererei
ENSPMEG00000006448	-	88	53.896	ENSPNAG00000002109	mex3b	86	67.606	Pygocentrus_nattereri
ENSPMEG00000006448	-	81	69.145	ENSRNOG00000025142	Mex3b	69	70.111	Rattus_norvegicus
ENSPMEG00000006448	-	59	69.145	ENSRBIG00000033099	MEX3B	70	70.111	Rhinopithecus_bieti
ENSPMEG00000006448	-	59	69.145	ENSRROG00000041868	MEX3B	70	70.111	Rhinopithecus_roxellana
ENSPMEG00000006448	-	58	69.084	ENSSBOG00000031708	MEX3B	61	70.076	Saimiri_boliviensis_boliviensis
ENSPMEG00000006448	-	88	52.273	ENSSFOG00015016667	mex3b	87	50.482	Scleropages_formosus
ENSPMEG00000006448	-	88	54.113	ENSSFOG00015016308	mex3b	69	65.734	Scleropages_formosus
ENSPMEG00000006448	-	88	52.549	ENSSMAG00000017078	mex3b	91	50.662	Scophthalmus_maximus
ENSPMEG00000006448	-	87	75.778	ENSSMAG00000001075	-	100	82.444	Scophthalmus_maximus
ENSPMEG00000006448	-	99	81.439	ENSSDUG00000022255	-	100	82.878	Seriola_dumerili
ENSPMEG00000006448	-	88	53.254	ENSSDUG00000013254	mex3b	91	51.132	Seriola_dumerili
ENSPMEG00000006448	-	99	80.830	ENSSLDG00000024917	-	100	82.260	Seriola_lalandi_dorsalis
ENSPMEG00000006448	-	88	53.057	ENSSLDG00000014620	mex3b	91	51.132	Seriola_lalandi_dorsalis
ENSPMEG00000006448	-	88	55.699	ENSSPAG00000011854	mex3b	90	54.624	Stegastes_partitus
ENSPMEG00000006448	-	93	81.061	ENSSPAG00000002581	-	96	82.273	Stegastes_partitus
ENSPMEG00000006448	-	59	69.145	ENSSSCG00000038491	MEX3B	55	70.111	Sus_scrofa
ENSPMEG00000006448	-	99	74.746	ENSTRUG00000011888	-	100	76.197	Takifugu_rubripes
ENSPMEG00000006448	-	88	54.818	ENSTRUG00000000367	mex3b	93	50.000	Takifugu_rubripes
ENSPMEG00000006448	-	88	54.334	ENSTNIG00000003398	mex3b	90	53.170	Tetraodon_nigroviridis
ENSPMEG00000006448	-	59	63.918	ENSUAMG00000019302	MEX3B	56	64.846	Ursus_americanus
ENSPMEG00000006448	-	88	53.138	ENSXETG00000027601	mex3b	99	50.093	Xenopus_tropicalis
ENSPMEG00000006448	-	82	86.988	ENSXCOG00000005190	-	99	86.096	Xiphophorus_couchianus
ENSPMEG00000006448	-	100	97.647	ENSXMAG00000015283	-	100	97.647	Xiphophorus_maculatus