EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000006546 (Gene tree)
Gene ID: 106923103
Gene Symbol: rasef
Alias: -
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 21564 bases
Position: chrKQ551584.1:159778-181341
Accession: 106923103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000005200	MMR_HSR1	PF01926.23	1.5e-07	1	1
ENSPMEP00000024349	MMR_HSR1	PF01926.23	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000007876	-	3345	XM_014995984	ENSPMEP00000024349	696 (aa)	XP_014851470	-
ENSPMET00000007887	-	3019	XM_014995983	ENSPMEP00000005200	696 (aa)	XP_014851469	-

Gene Model

Click here to download ENSPMEG00000006546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000006546	rasef	73	41.026	ENSPMEG00000020754	cracr2b	79	41.026
ENSPMEG00000006546	rasef	75	38.000	ENSPMEG00000007308	cracr2ab	84	38.000
ENSPMEG00000006546	rasef	99	34.758	ENSPMEG00000014713	zgc:162879	99	34.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006546	rasef	99	51.135	ENSG00000165105	RASEF	99	51.333	Homo_sapiens
ENSPMEG00000006546	rasef	95	75.704	ENSAPOG00000024369	rasef	100	80.721	Acanthochromis_polyacanthus
ENSPMEG00000006546	rasef	98	51.696	ENSAMEG00000009467	RASEF	98	51.967	Ailuropoda_melanoleuca
ENSPMEG00000006546	rasef	95	74.887	ENSACIG00000005549	rasef	98	74.887	Amphilophus_citrinellus
ENSPMEG00000006546	rasef	99	76.538	ENSAOCG00000011464	rasef	96	76.538	Amphiprion_ocellaris
ENSPMEG00000006546	rasef	100	81.373	ENSAPEG00000003461	rasef	100	81.933	Amphiprion_percula
ENSPMEG00000006546	rasef	95	80.118	ENSATEG00000015032	rasef	100	80.502	Anabas_testudineus
ENSPMEG00000006546	rasef	85	53.323	ENSAPLG00000013969	RASEF	95	53.323	Anas_platyrhynchos
ENSPMEG00000006546	rasef	100	51.907	ENSACAG00000002155	RASEF	99	51.907	Anolis_carolinensis
ENSPMEG00000006546	rasef	99	51.200	ENSANAG00000035226	RASEF	99	51.600	Aotus_nancymaae
ENSPMEG00000006546	rasef	100	82.560	ENSACLG00000017818	rasef	100	82.560	Astatotilapia_calliptera
ENSPMEG00000006546	rasef	98	57.462	ENSAMXG00000011411	rasef	97	57.880	Astyanax_mexicanus
ENSPMEG00000006546	rasef	99	51.867	ENSBTAG00000021751	RASEF	98	51.807	Bos_taurus
ENSPMEG00000006546	rasef	99	51.872	ENSCJAG00000003547	RASEF	99	51.802	Callithrix_jacchus
ENSPMEG00000006546	rasef	96	54.905	ENSCAFG00000001453	RASEF	91	51.050	Canis_familiaris
ENSPMEG00000006546	rasef	96	55.079	ENSCAFG00020023859	RASEF	99	51.862	Canis_lupus_dingo
ENSPMEG00000006546	rasef	99	51.387	ENSCHIG00000020336	RASEF	96	54.502	Capra_hircus
ENSPMEG00000006546	rasef	74	53.918	ENSTSYG00000006987	RASEF	99	53.918	Carlito_syrichta
ENSPMEG00000006546	rasef	72	46.979	ENSCAPG00000010585	-	99	46.979	Cavia_aperea
ENSPMEG00000006546	rasef	85	52.280	ENSCPOG00000005004	RASEF	99	52.280	Cavia_porcellus
ENSPMEG00000006546	rasef	99	51.673	ENSCCAG00000031624	RASEF	99	52.005	Cebus_capucinus
ENSPMEG00000006546	rasef	74	37.051	ENSCLAG00000004622	-	93	37.051	Chinchilla_lanigera
ENSPMEG00000006546	rasef	99	52.145	ENSCSAG00000007663	RASEF	99	52.145	Chlorocebus_sabaeus
ENSPMEG00000006546	rasef	83	54.682	ENSCHOG00000001831	RASEF	96	54.682	Choloepus_hoffmanni
ENSPMEG00000006546	rasef	99	52.210	ENSCPBG00000019037	RASEF	99	52.210	Chrysemys_picta_bellii
ENSPMEG00000006546	rasef	99	51.402	ENSCANG00000034081	RASEF	99	51.333	Colobus_angolensis_palliatus
ENSPMEG00000006546	rasef	85	53.554	ENSCGRG00001001324	Rasef	99	53.554	Cricetulus_griseus_chok1gshd
ENSPMEG00000006546	rasef	80	52.982	ENSCGRG00000006455	Rasef	99	52.982	Cricetulus_griseus_crigri
ENSPMEG00000006546	rasef	92	67.077	ENSCSEG00000017898	rasef	92	67.385	Cynoglossus_semilaevis
ENSPMEG00000006546	rasef	100	90.085	ENSCVAG00000006168	rasef	96	90.085	Cyprinodon_variegatus
ENSPMEG00000006546	rasef	99	58.626	ENSDARG00000076250	rasef	99	58.626	Danio_rerio
ENSPMEG00000006546	rasef	99	51.798	ENSDNOG00000006002	RASEF	90	51.798	Dasypus_novemcinctus
ENSPMEG00000006546	rasef	78	53.464	ENSDORG00000015570	Rasef	99	53.381	Dipodomys_ordii
ENSPMEG00000006546	rasef	95	43.741	ENSEBUG00000012629	rasef	96	43.696	Eptatretus_burgeri
ENSPMEG00000006546	rasef	84	36.187	ENSEBUG00000012179	rasef	99	36.187	Eptatretus_burgeri
ENSPMEG00000006546	rasef	99	53.760	ENSEASG00005015967	RASEF	99	53.760	Equus_asinus_asinus
ENSPMEG00000006546	rasef	99	53.095	ENSECAG00000000324	RASEF	98	54.560	Equus_caballus
ENSPMEG00000006546	rasef	80	48.696	ENSEEUG00000008455	RASEF	99	48.696	Erinaceus_europaeus
ENSPMEG00000006546	rasef	99	52.011	ENSFCAG00000002416	RASEF	99	52.005	Felis_catus
ENSPMEG00000006546	rasef	85	54.221	ENSFALG00000003611	RASEF	99	54.221	Ficedula_albicollis
ENSPMEG00000006546	rasef	85	54.133	ENSFDAG00000013428	RASEF	99	54.133	Fukomys_damarensis
ENSPMEG00000006546	rasef	96	83.383	ENSFHEG00000022470	rasef	92	83.383	Fundulus_heteroclitus
ENSPMEG00000006546	rasef	84	84.795	ENSGMOG00000010090	rasef	100	67.068	Gadus_morhua
ENSPMEG00000006546	rasef	99	51.565	ENSGALG00000012576	RASEF	99	51.837	Gallus_gallus
ENSPMEG00000006546	rasef	100	96.280	ENSGAFG00000013735	rasef	97	96.280	Gambusia_affinis
ENSPMEG00000006546	rasef	100	76.562	ENSGACG00000007528	rasef	100	76.562	Gasterosteus_aculeatus
ENSPMEG00000006546	rasef	100	52.893	ENSGAGG00000007338	RASEF	99	52.893	Gopherus_agassizii
ENSPMEG00000006546	rasef	99	51.001	ENSGGOG00000006651	RASEF	99	51.535	Gorilla_gorilla
ENSPMEG00000006546	rasef	100	82.138	ENSHBUG00000010345	rasef	99	82.138	Haplochromis_burtoni
ENSPMEG00000006546	rasef	99	51.552	ENSHGLG00000000399	RASEF	99	51.552	Heterocephalus_glaber_female
ENSPMEG00000006546	rasef	85	53.909	ENSHGLG00100008043	RASEF	99	53.909	Heterocephalus_glaber_male
ENSPMEG00000006546	rasef	99	63.047	ENSHCOG00000010976	rasef	99	63.047	Hippocampus_comes
ENSPMEG00000006546	rasef	95	55.604	ENSIPUG00000008768	rasef	93	55.604	Ictalurus_punctatus
ENSPMEG00000006546	rasef	99	49.602	ENSSTOG00000004311	RASEF	99	50.466	Ictidomys_tridecemlineatus
ENSPMEG00000006546	rasef	85	54.383	ENSJJAG00000023215	Rasef	99	54.383	Jaculus_jaculus
ENSPMEG00000006546	rasef	100	80.387	ENSKMAG00000021106	rasef	88	80.387	Kryptolebias_marmoratus
ENSPMEG00000006546	rasef	95	77.345	ENSLBEG00000021098	-	99	70.809	Labrus_bergylta
ENSPMEG00000006546	rasef	99	54.457	ENSLACG00000010849	RASEF	99	54.596	Latimeria_chalumnae
ENSPMEG00000006546	rasef	99	59.129	ENSLOCG00000002094	rasef	99	59.129	Lepisosteus_oculatus
ENSPMEG00000006546	rasef	85	55.049	ENSLAFG00000010552	RASEF	99	55.049	Loxodonta_africana
ENSPMEG00000006546	rasef	99	51.402	ENSMFAG00000046414	RASEF	99	51.867	Macaca_fascicularis
ENSPMEG00000006546	rasef	99	51.197	ENSMNEG00000044341	RASEF	99	51.660	Macaca_nemestrina
ENSPMEG00000006546	rasef	99	51.402	ENSMLEG00000034579	RASEF	99	51.867	Mandrillus_leucophaeus
ENSPMEG00000006546	rasef	87	79.126	ENSMAMG00000001536	rasef	97	79.254	Mastacembelus_armatus
ENSPMEG00000006546	rasef	96	72.347	ENSMZEG00005004819	rasef	99	72.347	Maylandia_zebra
ENSPMEG00000006546	rasef	85	54.902	ENSMAUG00000010820	Rasef	99	54.902	Mesocricetus_auratus
ENSPMEG00000006546	rasef	88	55.151	ENSMICG00000011836	RASEF	99	52.064	Microcebus_murinus
ENSPMEG00000006546	rasef	86	53.583	ENSMOCG00000000943	Rasef	99	53.158	Microtus_ochrogaster
ENSPMEG00000006546	rasef	95	69.881	ENSMMOG00000000102	rasef	96	70.475	Mola_mola
ENSPMEG00000006546	rasef	99	51.539	ENSMODG00000009037	RASEF	99	51.673	Monodelphis_domestica
ENSPMEG00000006546	rasef	100	75.823	ENSMALG00000009830	rasef	100	75.823	Monopterus_albus
ENSPMEG00000006546	rasef	88	52.716	MGP_CAROLIEiJ_G0026109	Rasef	99	53.684	Mus_caroli
ENSPMEG00000006546	rasef	99	52.654	ENSMUSG00000043003	Rasef	99	53.684	Mus_musculus
ENSPMEG00000006546	rasef	85	53.783	MGP_PahariEiJ_G0028447	Rasef	99	53.509	Mus_pahari
ENSPMEG00000006546	rasef	87	53.485	MGP_SPRETEiJ_G0027075	Rasef	99	53.684	Mus_spretus
ENSPMEG00000006546	rasef	79	52.715	ENSMPUG00000013070	RASEF	99	52.715	Mustela_putorius_furo
ENSPMEG00000006546	rasef	98	51.687	ENSMLUG00000013108	RASEF	99	51.459	Myotis_lucifugus
ENSPMEG00000006546	rasef	80	54.671	ENSNGAG00000014878	Rasef	99	54.671	Nannospalax_galili
ENSPMEG00000006546	rasef	95	66.519	ENSNBRG00000012335	rasef	99	66.519	Neolamprologus_brichardi
ENSPMEG00000006546	rasef	99	50.933	ENSNLEG00000003245	RASEF	99	51.200	Nomascus_leucogenys
ENSPMEG00000006546	rasef	99	50.200	ENSMEUG00000016412	RASEF	99	50.200	Notamacropus_eugenii
ENSPMEG00000006546	rasef	85	53.448	ENSOPRG00000002742	-	80	53.448	Ochotona_princeps
ENSPMEG00000006546	rasef	100	82.535	ENSONIG00000015021	rasef	95	82.535	Oreochromis_niloticus
ENSPMEG00000006546	rasef	99	49.603	ENSOANG00000010379	RASEF	99	50.000	Ornithorhynchus_anatinus
ENSPMEG00000006546	rasef	99	50.798	ENSOCUG00000001548	RASEF	99	50.599	Oryctolagus_cuniculus
ENSPMEG00000006546	rasef	100	79.096	ENSORLG00000005076	rasef	96	79.802	Oryzias_latipes
ENSPMEG00000006546	rasef	100	79.096	ENSORLG00020020049	rasef	96	79.802	Oryzias_latipes_hni
ENSPMEG00000006546	rasef	100	79.096	ENSORLG00015008479	rasef	96	79.802	Oryzias_latipes_hsok
ENSPMEG00000006546	rasef	100	80.085	ENSOMEG00000023457	rasef	99	81.481	Oryzias_melastigma
ENSPMEG00000006546	rasef	85	55.501	ENSOGAG00000012724	RASEF	99	55.501	Otolemur_garnettii
ENSPMEG00000006546	rasef	99	51.387	ENSOARG00000009073	RASEF	93	51.459	Ovis_aries
ENSPMEG00000006546	rasef	99	52.690	ENSPPAG00000042152	RASEF	99	53.177	Pan_paniscus
ENSPMEG00000006546	rasef	99	51.402	ENSPPRG00000008487	RASEF	99	52.064	Panthera_pardus
ENSPMEG00000006546	rasef	88	55.096	ENSPTIG00000006676	RASEF	96	53.096	Panthera_tigris_altaica
ENSPMEG00000006546	rasef	99	52.690	ENSPTRG00000021052	RASEF	99	53.030	Pan_troglodytes
ENSPMEG00000006546	rasef	99	51.402	ENSPANG00000024899	RASEF	99	51.936	Papio_anubis
ENSPMEG00000006546	rasef	86	53.710	ENSPSIG00000017699	RASEF	96	53.440	Pelodiscus_sinensis
ENSPMEG00000006546	rasef	100	57.426	ENSPMGG00000015499	rasef	86	91.176	Periophthalmus_magnuspinnatus
ENSPMEG00000006546	rasef	85	53.934	ENSPEMG00000002797	Rasef	99	53.934	Peromyscus_maniculatus_bairdii
ENSPMEG00000006546	rasef	95	40.027	ENSPMAG00000001634	rasef	98	40.164	Petromyzon_marinus
ENSPMEG00000006546	rasef	99	51.738	ENSPCIG00000027655	RASEF	99	51.738	Phascolarctos_cinereus
ENSPMEG00000006546	rasef	99	90.261	ENSPFOG00000018924	rasef	99	90.261	Poecilia_formosa
ENSPMEG00000006546	rasef	85	85.835	ENSPLAG00000022907	RASEF	97	85.835	Poecilia_latipinna
ENSPMEG00000006546	rasef	100	97.282	ENSPREG00000018728	rasef	95	97.282	Poecilia_reticulata
ENSPMEG00000006546	rasef	99	51.402	ENSPPYG00000019320	RASEF	99	51.268	Pongo_abelii
ENSPMEG00000006546	rasef	99	52.450	ENSPCOG00000022979	RASEF	99	52.450	Propithecus_coquereli
ENSPMEG00000006546	rasef	96	54.675	ENSPVAG00000003682	RASEF	99	51.200	Pteropus_vampyrus
ENSPMEG00000006546	rasef	95	79.173	ENSPNYG00000010579	rasef	94	79.173	Pundamilia_nyererei
ENSPMEG00000006546	rasef	99	56.863	ENSPNAG00000016447	rasef	98	56.863	Pygocentrus_nattereri
ENSPMEG00000006546	rasef	99	52.566	ENSRNOG00000024190	Rasef	99	52.566	Rattus_norvegicus
ENSPMEG00000006546	rasef	99	51.729	ENSRBIG00000039516	RASEF	99	52.058	Rhinopithecus_bieti
ENSPMEG00000006546	rasef	95	52.500	ENSRROG00000044397	RASEF	99	52.917	Rhinopithecus_roxellana
ENSPMEG00000006546	rasef	99	50.401	ENSSBOG00000029298	RASEF	99	50.401	Saimiri_boliviensis_boliviensis
ENSPMEG00000006546	rasef	99	56.787	ENSSFOG00015009014	rasef	99	56.787	Scleropages_formosus
ENSPMEG00000006546	rasef	99	77.994	ENSSMAG00000000942	rasef	99	78.273	Scophthalmus_maximus
ENSPMEG00000006546	rasef	85	78.309	ENSSDUG00000022228	rasef	93	78.309	Seriola_dumerili
ENSPMEG00000006546	rasef	100	79.221	ENSSLDG00000001784	rasef	94	79.972	Seriola_lalandi_dorsalis
ENSPMEG00000006546	rasef	99	51.469	ENSSPUG00000002899	RASEF	99	51.469	Sphenodon_punctatus
ENSPMEG00000006546	rasef	100	80.360	ENSSPAG00000002442	rasef	96	80.360	Stegastes_partitus
ENSPMEG00000006546	rasef	88	55.751	ENSSSCG00000040707	-	93	55.662	Sus_scrofa
ENSPMEG00000006546	rasef	99	52.524	ENSTGUG00000003216	RASEF	99	52.524	Taeniopygia_guttata
ENSPMEG00000006546	rasef	99	78.501	ENSTRUG00000011541	rasef	99	78.501	Takifugu_rubripes
ENSPMEG00000006546	rasef	99	70.321	ENSTNIG00000006010	rasef	99	70.321	Tetraodon_nigroviridis
ENSPMEG00000006546	rasef	99	47.012	ENSTTRG00000002061	RASEF	99	47.012	Tursiops_truncatus
ENSPMEG00000006546	rasef	99	52.270	ENSUAMG00000021591	RASEF	99	52.198	Ursus_americanus
ENSPMEG00000006546	rasef	85	54.501	ENSUMAG00000004670	RASEF	94	54.501	Ursus_maritimus
ENSPMEG00000006546	rasef	86	54.870	ENSVVUG00000029736	RASEF	97	54.797	Vulpes_vulpes
ENSPMEG00000006546	rasef	99	49.662	ENSXETG00000016758	mgc147600	99	49.662	Xenopus_tropicalis
ENSPMEG00000006546	rasef	80	73.619	ENSXCOG00000005178	rasef	83	73.619	Xiphophorus_couchianus
ENSPMEG00000006546	rasef	100	96.710	ENSXMAG00000015129	rasef	100	96.710	Xiphophorus_maculatus