EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPMEG00000006555 (Gene tree)
Gene ID
106910531
Gene Symbol
patl1
Alias
-
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Plus strand
Length
14324 bases
Position
chrKQ554516.1:26391-40714
Accession
106910531
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000024350PAT1PF09770.96e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000007868-2999XM_014977186ENSPMEP00000024350795 (aa)XP_014832672-
Gene Model
Click here to download ENSPMEG00000006555's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006555's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000006555patl17649.924ENSG00000166889PATL18549.469Homo_sapiens
ENSPMEG00000006555patl15038.235ENSG00000229474PATL29939.071Homo_sapiens
ENSPMEG00000006555patl15136.557ENSAPOG00000022988patl25837.000Acanthochromis_polyacanthus
ENSPMEG00000006555patl19978.967ENSAPOG00000021290patl19979.849Acanthochromis_polyacanthus
ENSPMEG00000006555patl15037.438ENSAMEG00000014997PATL27737.653Ailuropoda_melanoleuca
ENSPMEG00000006555patl17650.606ENSAMEG00000014215PATL15553.286Ailuropoda_melanoleuca
ENSPMEG00000006555patl19978.571ENSACIG00000005182patl19979.950Amphilophus_citrinellus
ENSPMEG00000006555patl15135.363ENSAOCG00000023738patl25136.020Amphiprion_ocellaris
ENSPMEG00000006555patl19481.638ENSAOCG00000021993patl19581.192Amphiprion_ocellaris
ENSPMEG00000006555patl19982.609ENSAPEG00000021391patl110084.318Amphiprion_percula
ENSPMEG00000006555patl15135.294ENSAPEG00000011299patl26135.949Amphiprion_percula
ENSPMEG00000006555patl15136.000ENSATEG00000019567patl26236.520Anabas_testudineus
ENSPMEG00000006555patl110079.830ENSATEG00000002230patl110081.553Anabas_testudineus
ENSPMEG00000006555patl15348.069ENSAPLG00000013394PATL19346.983Anas_platyrhynchos
ENSPMEG00000006555patl15836.756ENSAPLG00000003980PATL26440.250Anas_platyrhynchos
ENSPMEG00000006555patl17251.037ENSACAG00000006607PATL18149.361Anolis_carolinensis
ENSPMEG00000006555patl17649.924ENSANAG00000023078PATL18549.469Aotus_nancymaae
ENSPMEG00000006555patl110082.871ENSACLG00000005144patl110083.353Astatotilapia_calliptera
ENSPMEG00000006555patl15136.451ENSACLG00000010326patl25636.451Astatotilapia_calliptera
ENSPMEG00000006555patl15339.002ENSAMXG00000020293patl26138.785Astyanax_mexicanus
ENSPMEG00000006555patl15084.211ENSAMXG00000010731patl110075.373Astyanax_mexicanus
ENSPMEG00000006555patl17650.606ENSBTAG00000005913PATL18549.848Bos_taurus
ENSPMEG00000006555patl15336.404ENSCJAG00000002379PATL27736.952Callithrix_jacchus
ENSPMEG00000006555patl17649.924ENSCJAG00000016192PATL18549.469Callithrix_jacchus
ENSPMEG00000006555patl15038.107ENSCAFG00000013629PATL27438.107Canis_familiaris
ENSPMEG00000006555patl17650.758ENSCAFG00000007581PATL15553.521Canis_familiaris
ENSPMEG00000006555patl15038.107ENSCAFG00020022169PATL27438.107Canis_lupus_dingo
ENSPMEG00000006555patl110042.993ENSCAFG00020001648PATL110041.408Canis_lupus_dingo
ENSPMEG00000006555patl17650.378ENSCHIG00000025913PATL18548.276Capra_hircus
ENSPMEG00000006555patl15039.568ENSCHIG00000026665PATL27639.568Capra_hircus
ENSPMEG00000006555patl17550.765ENSTSYG00000012748PATL19349.211Carlito_syrichta
ENSPMEG00000006555patl15337.246ENSTSYG00000032456PATL27337.990Carlito_syrichta
ENSPMEG00000006555patl19749.249ENSCAPG00000013668PATL19947.748Cavia_aperea
ENSPMEG00000006555patl19747.807ENSCPOG00000006827PATL17451.748Cavia_porcellus
ENSPMEG00000006555patl17649.924ENSCCAG00000023759PATL18549.469Cebus_capucinus
ENSPMEG00000006555patl17649.924ENSCATG00000009629PATL18549.469Cercocebus_atys
ENSPMEG00000006555patl15036.124ENSCLAG00000014407PATL27337.696Chinchilla_lanigera
ENSPMEG00000006555patl17649.020ENSCLAG00000003427PATL18547.813Chinchilla_lanigera
ENSPMEG00000006555patl17649.924ENSCSAG00000006095PATL19449.469Chlorocebus_sabaeus
ENSPMEG00000006555patl16358.000ENSCHOG00000001611PATL18358.000Choloepus_hoffmanni
ENSPMEG00000006555patl15338.565ENSCPBG00000006150PATL26139.183Chrysemys_picta_bellii
ENSPMEG00000006555patl17649.924ENSCANG00000039197PATL18549.469Colobus_angolensis_palliatus
ENSPMEG00000006555patl15337.045ENSCANG00000013856PATL27338.480Colobus_angolensis_palliatus
ENSPMEG00000006555patl17550.302ENSCGRG00001024927Patl18449.924Cricetulus_griseus_chok1gshd
ENSPMEG00000006555patl17550.302ENSCGRG00000000461Patl18549.924Cricetulus_griseus_crigri
ENSPMEG00000006555patl15233.796ENSCSEG00000009438patl25734.509Cynoglossus_semilaevis
ENSPMEG00000006555patl110077.431ENSCSEG00000008261patl110080.552Cynoglossus_semilaevis
ENSPMEG00000006555patl19087.130ENSCVAG00000006664patl19987.130Cyprinodon_variegatus
ENSPMEG00000006555patl15133.729ENSCVAG00000016203patl26034.430Cyprinodon_variegatus
ENSPMEG00000006555patl110072.285ENSDARG00000017423patl110071.501Danio_rerio
ENSPMEG00000006555patl19345.083ENSDNOG00000038865PATL19947.905Dasypus_novemcinctus
ENSPMEG00000006555patl17649.469ENSDORG00000000237Patl18549.014Dipodomys_ordii
ENSPMEG00000006555patl15335.240ENSEASG00005017984PATL27336.098Equus_asinus_asinus
ENSPMEG00000006555patl110044.033ENSEASG00005007963PATL110043.214Equus_asinus_asinus
ENSPMEG00000006555patl17650.453ENSECAG00000011411PATL18548.563Equus_caballus
ENSPMEG00000006555patl15336.301ENSECAG00000013462PATL27337.226Equus_caballus
ENSPMEG00000006555patl16134.739ENSELUG00000023244patl25437.531Esox_lucius
ENSPMEG00000006555patl110073.096ENSELUG00000024249patl110073.301Esox_lucius
ENSPMEG00000006555patl15338.041ENSFCAG00000027170PATL27538.647Felis_catus
ENSPMEG00000006555patl17650.531ENSFCAG00000015573PATL18549.014Felis_catus
ENSPMEG00000006555patl16134.190ENSFALG00000009768PATL25538.035Ficedula_albicollis
ENSPMEG00000006555patl19946.536ENSFALG00000012150PATL19949.849Ficedula_albicollis
ENSPMEG00000006555patl17650.000ENSFDAG00000016128PATL18549.091Fukomys_damarensis
ENSPMEG00000006555patl19988.529ENSFHEG00000017790patl110088.903Fundulus_heteroclitus
ENSPMEG00000006555patl15135.828ENSGMOG00000005666patl210036.650Gadus_morhua
ENSPMEG00000006555patl15635.118ENSGALG00000002167PATL25038.119Gallus_gallus
ENSPMEG00000006555patl19149.849ENSGALG00000042641PATL19949.694Gallus_gallus
ENSPMEG00000006555patl110095.636ENSGAFG00000006508patl110095.636Gambusia_affinis
ENSPMEG00000006555patl19971.602ENSGACG00000016448patl15587.500Gasterosteus_aculeatus
ENSPMEG00000006555patl19750.000ENSGAGG00000004461PATL110048.946Gopherus_agassizii
ENSPMEG00000006555patl15337.528ENSGGOG00000025923PATL27338.983Gorilla_gorilla
ENSPMEG00000006555patl19941.974ENSGGOG00000004335PATL110040.732Gorilla_gorilla
ENSPMEG00000006555patl110082.871ENSHBUG00000005365patl110083.353Haplochromis_burtoni
ENSPMEG00000006555patl15136.603ENSHBUG00000005929patl26336.538Haplochromis_burtoni
ENSPMEG00000006555patl110042.774ENSHGLG00000018173PATL110041.608Heterocephalus_glaber_female
ENSPMEG00000006555patl17649.924ENSHGLG00100003453PATL18648.710Heterocephalus_glaber_male
ENSPMEG00000006555patl15135.597ENSHCOG00000016754patl25835.377Hippocampus_comes
ENSPMEG00000006555patl110075.422ENSHCOG00000001898patl110076.506Hippocampus_comes
ENSPMEG00000006555patl15935.108ENSIPUG00000020692patl25638.500Ictalurus_punctatus
ENSPMEG00000006555patl15337.246ENSSTOG00000033848PATL27438.609Ictidomys_tridecemlineatus
ENSPMEG00000006555patl17650.683ENSSTOG00000013764PATL18549.924Ictidomys_tridecemlineatus
ENSPMEG00000006555patl17649.697ENSJJAG00000010135Patl18548.182Jaculus_jaculus
ENSPMEG00000006555patl110084.783ENSKMAG00000020848patl110085.455Kryptolebias_marmoratus
ENSPMEG00000006555patl15136.038ENSKMAG00000021275patl25535.971Kryptolebias_marmoratus
ENSPMEG00000006555patl110081.227ENSLBEG00000023617patl110082.792Labrus_bergylta
ENSPMEG00000006555patl15237.327ENSLBEG00000022344patl25338.131Labrus_bergylta
ENSPMEG00000006555patl17867.273ENSLACG00000004640PATL19067.273Latimeria_chalumnae
ENSPMEG00000006555patl110061.807ENSLOCG00000000717patl110062.606Lepisosteus_oculatus
ENSPMEG00000006555patl17650.835ENSLAFG00000015161PATL18549.772Loxodonta_africana
ENSPMEG00000006555patl17649.924ENSMFAG00000040851PATL18549.469Macaca_fascicularis
ENSPMEG00000006555patl17649.924ENSMMUG00000017287PATL18549.469Macaca_mulatta
ENSPMEG00000006555patl17649.924ENSMNEG00000038692PATL18549.469Macaca_nemestrina
ENSPMEG00000006555patl17650.076ENSMLEG00000030044PATL18548.271Mandrillus_leucophaeus
ENSPMEG00000006555patl15136.277ENSMAMG00000013327patl26336.277Mastacembelus_armatus
ENSPMEG00000006555patl110079.422ENSMAMG00000003950patl110080.987Mastacembelus_armatus
ENSPMEG00000006555patl15136.451ENSMZEG00005014292patl25636.451Maylandia_zebra
ENSPMEG00000006555patl110082.871ENSMZEG00005013404patl110083.353Maylandia_zebra
ENSPMEG00000006555patl19244.151ENSMGAG00000003406PATL19947.438Meleagris_gallopavo
ENSPMEG00000006555patl17544.479ENSMAUG00000012059Patl18544.255Mesocricetus_auratus
ENSPMEG00000006555patl15335.632ENSMAUG00000001008Patl27736.124Mesocricetus_auratus
ENSPMEG00000006555patl17547.095ENSMICG00000004172PATL18050.288Microcebus_murinus
ENSPMEG00000006555patl15037.864ENSMOCG00000015367Patl27537.864Microtus_ochrogaster
ENSPMEG00000006555patl17550.302ENSMOCG00000010087Patl18449.924Microtus_ochrogaster
ENSPMEG00000006555patl17896.552ENSMMOG00000013711patl19580.769Mola_mola
ENSPMEG00000006555patl17650.749ENSMODG00000020201PATL18550.453Monodelphis_domestica
ENSPMEG00000006555patl15338.377ENSMODG00000017690PATL27339.252Monodelphis_domestica
ENSPMEG00000006555patl19572.775ENSMALG00000018706patl110074.738Monopterus_albus
ENSPMEG00000006555patl17650.000MGP_CAROLIEiJ_G0022739Patl18549.772Mus_caroli
ENSPMEG00000006555patl17650.000ENSMUSG00000046139Patl18549.772Mus_musculus
ENSPMEG00000006555patl17650.000MGP_PahariEiJ_G0014233Patl18549.772Mus_pahari
ENSPMEG00000006555patl17650.000MGP_SPRETEiJ_G0023652Patl18549.772Mus_spretus
ENSPMEG00000006555patl17650.909ENSMPUG00000014607PATL15553.521Mustela_putorius_furo
ENSPMEG00000006555patl17650.700ENSMLUG00000011169PATL18449.765Myotis_lucifugus
ENSPMEG00000006555patl17649.924ENSNGAG00000003682Patl18449.394Nannospalax_galili
ENSPMEG00000006555patl16973.604ENSNBRG00000015372patl19356.164Neolamprologus_brichardi
ENSPMEG00000006555patl15136.385ENSNBRG00000011745patl25936.919Neolamprologus_brichardi
ENSPMEG00000006555patl19349.221ENSNLEG00000013081PATL110047.840Nomascus_leucogenys
ENSPMEG00000006555patl15337.246ENSNLEG00000005673PATL27438.686Nomascus_leucogenys
ENSPMEG00000006555patl16057.051ENSMEUG00000009391PATL17457.051Notamacropus_eugenii
ENSPMEG00000006555patl16254.907ENSOPRG00000007963PATL17654.907Ochotona_princeps
ENSPMEG00000006555patl15347.418ENSODEG00000001792PATL17054.037Octodon_degus
ENSPMEG00000006555patl110082.971ENSONIG00000004170patl110083.696Oreochromis_niloticus
ENSPMEG00000006555patl17650.835ENSOCUG00000002156PATL18549.772Oryctolagus_cuniculus
ENSPMEG00000006555patl15434.884ENSOCUG00000006339PATL27736.983Oryctolagus_cuniculus
ENSPMEG00000006555patl15135.897ENSORLG00000005780patl25536.341Oryzias_latipes
ENSPMEG00000006555patl15135.897ENSORLG00020016506patl25436.341Oryzias_latipes_hni
ENSPMEG00000006555patl15135.897ENSORLG00015014500patl25536.341Oryzias_latipes_hsok
ENSPMEG00000006555patl17583.663ENSORLG00015022240patl110072.986Oryzias_latipes_hsok
ENSPMEG00000006555patl15036.098ENSOMEG00000021628patl25835.437Oryzias_melastigma
ENSPMEG00000006555patl15436.652ENSOGAG00000004709PATL27437.438Otolemur_garnettii
ENSPMEG00000006555patl17649.924ENSOGAG00000004351PATL18549.469Otolemur_garnettii
ENSPMEG00000006555patl17650.681ENSOARG00000012005PATL18248.576Ovis_aries
ENSPMEG00000006555patl15337.246ENSPPAG00000007221PATL27338.686Pan_paniscus
ENSPMEG00000006555patl110041.795ENSPPAG00000034275PATL110040.563Pan_paniscus
ENSPMEG00000006555patl15337.358ENSPPRG00000004279PATL27538.015Panthera_pardus
ENSPMEG00000006555patl17650.531ENSPPRG00000020639PATL18549.014Panthera_pardus
ENSPMEG00000006555patl15337.358ENSPTIG00000018964PATL27538.015Panthera_tigris_altaica
ENSPMEG00000006555patl17650.531ENSPTIG00000019298PATL18549.772Panthera_tigris_altaica
ENSPMEG00000006555patl17546.749ENSPTRG00000003697PATL19148.449Pan_troglodytes
ENSPMEG00000006555patl15337.246ENSPTRG00000041536PATL27338.686Pan_troglodytes
ENSPMEG00000006555patl17649.924ENSPANG00000035620PATL18549.469Papio_anubis
ENSPMEG00000006555patl110072.886ENSPKIG00000016224patl110073.192Paramormyrops_kingsleyae
ENSPMEG00000006555patl19451.667ENSPSIG00000016206PATL19647.384Pelodiscus_sinensis
ENSPMEG00000006555patl15633.263ENSPMGG00000014550patl26234.848Periophthalmus_magnuspinnatus
ENSPMEG00000006555patl110078.967ENSPMGG00000002644patl110079.090Periophthalmus_magnuspinnatus
ENSPMEG00000006555patl15235.666ENSPEMG00000016509Patl27337.811Peromyscus_maniculatus_bairdii
ENSPMEG00000006555patl17549.925ENSPEMG00000014215Patl18549.392Peromyscus_maniculatus_bairdii
ENSPMEG00000006555patl110046.021ENSPCIG00000010852PATL110045.751Phascolarctos_cinereus
ENSPMEG00000006555patl15238.041ENSPCIG00000018256PATL28038.929Phascolarctos_cinereus
ENSPMEG00000006555patl110095.609ENSPFOG00000007768patl110099.588Poecilia_formosa
ENSPMEG00000006555patl110099.247ENSPLAG00000018465patl110099.247Poecilia_latipinna
ENSPMEG00000006555patl18996.197ENSPREG00000003874patl19596.197Poecilia_reticulata
ENSPMEG00000006555patl17650.228ENSPPYG00000003230PATL18549.772Pongo_abelii
ENSPMEG00000006555patl15338.053ENSPCOG00000000295PATL29939.572Propithecus_coquereli
ENSPMEG00000006555patl17650.000ENSPCOG00000020770PATL19848.056Propithecus_coquereli
ENSPMEG00000006555patl17648.480ENSPVAG00000015239PATL19947.489Pteropus_vampyrus
ENSPMEG00000006555patl18890.093ENSPNYG00000018936patl110089.846Pundamilia_nyererei
ENSPMEG00000006555patl15136.298ENSPNYG00000017381patl26436.298Pundamilia_nyererei
ENSPMEG00000006555patl15338.444ENSPNAG00000002315patl26139.110Pygocentrus_nattereri
ENSPMEG00000006555patl110074.471ENSPNAG00000017907patl110074.539Pygocentrus_nattereri
ENSPMEG00000006555patl17649.925ENSRNOG00000021052Patl18549.545Rattus_norvegicus
ENSPMEG00000006555patl17643.434ENSRBIG00000032263PATL18542.962Rhinopithecus_bieti
ENSPMEG00000006555patl17649.924ENSRROG00000032861PATL18549.469Rhinopithecus_roxellana
ENSPMEG00000006555patl110041.578ENSSBOG00000025195PATL110040.351Saimiri_boliviensis_boliviensis
ENSPMEG00000006555patl110046.074ENSSHAG00000004309PATL110045.921Sarcophilus_harrisii
ENSPMEG00000006555patl110071.856ENSSFOG00015009614patl110073.350Scleropages_formosus
ENSPMEG00000006555patl110079.567ENSSMAG00000009482patl110081.611Scophthalmus_maximus
ENSPMEG00000006555patl15135.952ENSSMAG00000017262patl26635.990Scophthalmus_maximus
ENSPMEG00000006555patl15137.089ENSSDUG00000022927patl25437.215Seriola_dumerili
ENSPMEG00000006555patl110079.097ENSSDUG00000005362patl110080.998Seriola_dumerili
ENSPMEG00000006555patl110078.954ENSSLDG00000019146patl110080.975Seriola_lalandi_dorsalis
ENSPMEG00000006555patl15137.176ENSSLDG00000017922patl26036.983Seriola_lalandi_dorsalis
ENSPMEG00000006555patl16050.566ENSSARG00000009600PATL15554.225Sorex_araneus
ENSPMEG00000006555patl17551.767ENSSPUG00000009453PATL110050.926Sphenodon_punctatus
ENSPMEG00000006555patl19979.523ENSSPAG00000003187patl19980.151Stegastes_partitus
ENSPMEG00000006555patl15135.461ENSSPAG00000004784patl26136.272Stegastes_partitus
ENSPMEG00000006555patl17650.455ENSSSCG00000013124PATL19448.750Sus_scrofa
ENSPMEG00000006555patl19946.118ENSTGUG00000006222PATL18650.151Taeniopygia_guttata
ENSPMEG00000006555patl110069.591ENSTRUG00000000709patl110069.492Takifugu_rubripes
ENSPMEG00000006555patl15534.573ENSTRUG00000005647patl25635.878Takifugu_rubripes
ENSPMEG00000006555patl16748.447ENSTBEG00000000796PATL17647.205Tupaia_belangeri
ENSPMEG00000006555patl16555.128ENSTTRG00000009389PATL18055.128Tursiops_truncatus
ENSPMEG00000006555patl15037.226ENSUAMG00000018533PATL27337.440Ursus_americanus
ENSPMEG00000006555patl17750.000ENSUMAG00000018634PATL18747.418Ursus_maritimus
ENSPMEG00000006555patl15037.226ENSUMAG00000007738PATL27337.440Ursus_maritimus
ENSPMEG00000006555patl17650.758ENSVVUG00000016668PATL18448.826Vulpes_vulpes
ENSPMEG00000006555patl15038.406ENSVVUG00000011576PATL27438.406Vulpes_vulpes
ENSPMEG00000006555patl17196.610ENSXCOG00000010808patl110096.610Xiphophorus_couchianus
ENSPMEG00000006555patl110095.387ENSXMAG00000013834patl110096.010Xiphophorus_maculatus

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