EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000006607 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 3392 bases
Position: chrKQ553077.1:734-4125
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000024371	RRM_1	PF00076.22	4.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000007812	-	411	-	ENSPMEP00000024371	136 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000006607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000006607	-	62	65.476	ENSPMEG00000018837	srsf11	69	65.476
ENSPMEG00000006607	-	100	100.000	ENSPMEG00000006824	-	100	100.000
ENSPMEG00000006607	-	60	69.136	ENSPMEG00000023453	-	56	69.136

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006607	-	85	71.552	ENSG00000153914	SREK1	93	79.167	Homo_sapiens
ENSPMEG00000006607	-	60	71.605	ENSG00000116754	SRSF11	64	71.951	Homo_sapiens
ENSPMEG00000006607	-	76	59.223	ENSAPOG00000004488	-	92	59.223	Acanthochromis_polyacanthus
ENSPMEG00000006607	-	60	67.073	ENSAPOG00000007244	-	59	67.073	Acanthochromis_polyacanthus
ENSPMEG00000006607	-	76	59.223	ENSACIG00000018075	-	92	59.223	Amphilophus_citrinellus
ENSPMEG00000006607	-	61	67.470	ENSACIG00000012348	-	87	67.470	Amphilophus_citrinellus
ENSPMEG00000006607	-	88	82.114	ENSACIG00000015055	-	98	82.114	Amphilophus_citrinellus
ENSPMEG00000006607	-	60	67.901	ENSAOCG00000000739	-	86	67.901	Amphiprion_ocellaris
ENSPMEG00000006607	-	63	95.294	ENSAOCG00000024368	-	86	95.294	Amphiprion_ocellaris
ENSPMEG00000006607	-	62	96.429	ENSAPEG00000002218	-	91	96.429	Amphiprion_percula
ENSPMEG00000006607	-	76	59.223	ENSAPEG00000003619	SRSF11	92	59.223	Amphiprion_percula
ENSPMEG00000006607	-	65	63.636	ENSAPEG00000003142	SRSF11	91	63.636	Amphiprion_percula
ENSPMEG00000006607	-	62	67.857	ENSATEG00000011691	srsf11	77	66.265	Anabas_testudineus
ENSPMEG00000006607	-	76	59.223	ENSATEG00000007534	-	92	59.223	Anabas_testudineus
ENSPMEG00000006607	-	63	94.186	ENSATEG00000009464	-	92	94.186	Anabas_testudineus
ENSPMEG00000006607	-	85	71.552	ENSANAG00000031358	SREK1	93	79.167	Aotus_nancymaae
ENSPMEG00000006607	-	60	67.073	ENSACLG00000000623	srsf11	84	67.073	Astatotilapia_calliptera
ENSPMEG00000006607	-	60	90.123	ENSBTAG00000007321	SREK1	81	90.123	Bos_taurus
ENSPMEG00000006607	-	60	88.889	ENSCJAG00000015950	SREK1	93	79.167	Callithrix_jacchus
ENSPMEG00000006607	-	61	69.880	ENSCAFG00020017255	-	74	70.238	Canis_lupus_dingo
ENSPMEG00000006607	-	85	72.414	ENSCAFG00020019449	-	92	79.381	Canis_lupus_dingo
ENSPMEG00000006607	-	61	69.880	ENSCHIG00000025295	SRSF11	71	70.238	Capra_hircus
ENSPMEG00000006607	-	60	90.123	ENSCHIG00000025052	-	81	90.123	Capra_hircus
ENSPMEG00000006607	-	61	67.470	ENSTSYG00000033270	-	59	67.857	Carlito_syrichta
ENSPMEG00000006607	-	85	72.414	ENSTSYG00000036957	SREK1	93	80.208	Carlito_syrichta
ENSPMEG00000006607	-	85	71.552	ENSCCAG00000020591	SREK1	93	79.167	Cebus_capucinus
ENSPMEG00000006607	-	63	86.047	ENSCATG00000031482	SREK1	93	79.167	Cercocebus_atys
ENSPMEG00000006607	-	85	71.552	ENSCPBG00000026866	SREK1	88	71.552	Chrysemys_picta_bellii
ENSPMEG00000006607	-	86	55.556	ENSCPBG00000022430	-	86	59.375	Chrysemys_picta_bellii
ENSPMEG00000006607	-	63	86.047	ENSCANG00000030421	SREK1	93	79.167	Colobus_angolensis_palliatus
ENSPMEG00000006607	-	88	88.333	ENSCSEG00000013934	-	91	91.250	Cynoglossus_semilaevis
ENSPMEG00000006607	-	88	82.787	ENSCVAG00000002404	-	98	82.787	Cyprinodon_variegatus
ENSPMEG00000006607	-	61	66.265	ENSDARG00000098574	srsf11	91	66.265	Danio_rerio
ENSPMEG00000006607	-	85	74.138	ENSDORG00000023160	-	96	68.702	Dipodomys_ordii
ENSPMEG00000006607	-	61	69.880	ENSEASG00005007847	SRSF11	74	70.238	Equus_asinus_asinus
ENSPMEG00000006607	-	85	72.414	ENSEASG00005006832	-	96	67.176	Equus_asinus_asinus
ENSPMEG00000006607	-	85	72.414	ENSECAG00000035731	-	96	67.176	Equus_caballus
ENSPMEG00000006607	-	64	67.816	ENSFCAG00000034448	-	65	71.951	Felis_catus
ENSPMEG00000006607	-	60	90.123	ENSFCAG00000036884	-	92	79.381	Felis_catus
ENSPMEG00000006607	-	85	78.333	ENSFHEG00000020959	-	93	78.333	Fundulus_heteroclitus
ENSPMEG00000006607	-	60	90.123	ENSGALG00000043541	SREK1	82	90.123	Gallus_gallus
ENSPMEG00000006607	-	88	97.479	ENSGAFG00000001732	-	98	97.479	Gambusia_affinis
ENSPMEG00000006607	-	85	71.552	ENSGAGG00000006087	SREK1	88	71.552	Gopherus_agassizii
ENSPMEG00000006607	-	60	73.171	ENSGAGG00000022411	-	80	73.171	Gopherus_agassizii
ENSPMEG00000006607	-	85	71.552	ENSGGOG00000004737	SREK1	93	79.167	Gorilla_gorilla
ENSPMEG00000006607	-	88	81.148	ENSHBUG00000007082	-	90	81.148	Haplochromis_burtoni
ENSPMEG00000006607	-	60	67.073	ENSHCOG00000016860	-	84	67.073	Hippocampus_comes
ENSPMEG00000006607	-	60	92.593	ENSHCOG00000017228	-	79	90.588	Hippocampus_comes
ENSPMEG00000006607	-	60	90.123	ENSSTOG00000008850	SREK1	93	80.208	Ictidomys_tridecemlineatus
ENSPMEG00000006607	-	85	73.276	ENSJJAG00000008846	-	98	67.939	Jaculus_jaculus
ENSPMEG00000006607	-	61	66.265	ENSLBEG00000024167	srsf11	84	67.073	Labrus_bergylta
ENSPMEG00000006607	-	93	77.612	ENSLBEG00000022954	-	97	77.612	Labrus_bergylta
ENSPMEG00000006607	-	85	71.552	ENSMFAG00000039823	SREK1	93	79.167	Macaca_fascicularis
ENSPMEG00000006607	-	63	86.047	ENSMMUG00000014586	SREK1	86	78.351	Macaca_mulatta
ENSPMEG00000006607	-	63	86.047	ENSMNEG00000030723	SREK1	93	79.167	Macaca_nemestrina
ENSPMEG00000006607	-	60	88.889	ENSMLEG00000039078	SREK1	93	79.167	Mandrillus_leucophaeus
ENSPMEG00000006607	-	76	59.223	ENSMAMG00000015002	-	93	59.223	Mastacembelus_armatus
ENSPMEG00000006607	-	69	91.489	ENSMAMG00000003099	-	89	91.489	Mastacembelus_armatus
ENSPMEG00000006607	-	82	81.579	ENSMZEG00005005707	-	88	81.579	Maylandia_zebra
ENSPMEG00000006607	-	60	90.123	ENSMICG00000034959	SREK1	93	80.208	Microcebus_murinus
ENSPMEG00000006607	-	66	64.444	ENSMMOG00000008877	-	87	64.444	Mola_mola
ENSPMEG00000006607	-	61	68.675	ENSMMOG00000016751	-	78	68.675	Mola_mola
ENSPMEG00000006607	-	87	74.576	ENSMALG00000017086	srek1	94	95.238	Monopterus_albus
ENSPMEG00000006607	-	60	68.293	ENSMALG00000016608	srsf11	84	68.293	Monopterus_albus
ENSPMEG00000006607	-	60	71.951	MGP_CAROLIEiJ_G0025767	Srsf11	82	71.951	Mus_caroli
ENSPMEG00000006607	-	60	71.951	ENSMUSG00000055436	Srsf11	81	71.951	Mus_musculus
ENSPMEG00000006607	-	60	71.951	MGP_PahariEiJ_G0027217	Srsf11	82	71.951	Mus_pahari
ENSPMEG00000006607	-	60	71.951	MGP_SPRETEiJ_G0026719	Srsf11	82	71.951	Mus_spretus
ENSPMEG00000006607	-	85	74.138	ENSNGAG00000014631	-	96	68.702	Nannospalax_galili
ENSPMEG00000006607	-	88	81.148	ENSNBRG00000010656	-	90	81.148	Neolamprologus_brichardi
ENSPMEG00000006607	-	61	67.470	ENSNBRG00000020213	-	87	67.470	Neolamprologus_brichardi
ENSPMEG00000006607	-	63	86.047	ENSNLEG00000003827	SREK1	93	79.167	Nomascus_leucogenys
ENSPMEG00000006607	-	85	72.414	ENSODEG00000016218	-	90	81.250	Octodon_degus
ENSPMEG00000006607	-	56	96.053	ENSORLG00000002711	-	63	96.053	Oryzias_latipes
ENSPMEG00000006607	-	76	60.194	ENSORLG00000030366	-	88	60.194	Oryzias_latipes
ENSPMEG00000006607	-	85	77.586	ENSORLG00020012815	-	98	70.896	Oryzias_latipes_hni
ENSPMEG00000006607	-	76	60.194	ENSORLG00020009393	-	88	60.194	Oryzias_latipes_hni
ENSPMEG00000006607	-	76	60.194	ENSORLG00015009374	-	88	60.194	Oryzias_latipes_hsok
ENSPMEG00000006607	-	88	77.311	ENSORLG00015020455	-	93	77.311	Oryzias_latipes_hsok
ENSPMEG00000006607	-	85	71.552	ENSPPAG00000031605	SREK1	86	78.351	Pan_paniscus
ENSPMEG00000006607	-	60	90.123	ENSPPRG00000024617	SREK1	92	79.381	Panthera_pardus
ENSPMEG00000006607	-	60	90.123	ENSPTIG00000006608	SREK1	92	79.381	Panthera_tigris_altaica
ENSPMEG00000006607	-	85	71.552	ENSPTRG00000016936	SREK1	93	79.167	Pan_troglodytes
ENSPMEG00000006607	-	85	71.552	ENSPANG00000008953	SREK1	93	79.167	Papio_anubis
ENSPMEG00000006607	-	61	66.265	ENSPKIG00000021576	-	87	66.265	Paramormyrops_kingsleyae
ENSPMEG00000006607	-	62	65.476	ENSPMGG00000005045	-	74	65.476	Periophthalmus_magnuspinnatus
ENSPMEG00000006607	-	61	66.265	ENSPMGG00000000954	-	78	66.265	Periophthalmus_magnuspinnatus
ENSPMEG00000006607	-	63	88.235	ENSPMGG00000017029	-	74	88.235	Periophthalmus_magnuspinnatus
ENSPMEG00000006607	-	60	69.136	ENSPLAG00000009484	-	56	69.136	Poecilia_latipinna
ENSPMEG00000006607	-	100	100.000	ENSPLAG00000008818	-	100	100.000	Poecilia_latipinna
ENSPMEG00000006607	-	100	100.000	ENSPLAG00000014609	-	100	100.000	Poecilia_latipinna
ENSPMEG00000006607	-	88	82.787	ENSPREG00000019922	-	98	82.787	Poecilia_reticulata
ENSPMEG00000006607	-	85	72.414	ENSPCOG00000026230	SREK1	93	80.208	Propithecus_coquereli
ENSPMEG00000006607	-	88	81.148	ENSPNYG00000007178	-	90	81.148	Pundamilia_nyererei
ENSPMEG00000006607	-	85	71.552	ENSRBIG00000033818	SREK1	93	79.167	Rhinopithecus_bieti
ENSPMEG00000006607	-	64	67.816	ENSRBIG00000042971	SRSF11	68	68.182	Rhinopithecus_bieti
ENSPMEG00000006607	-	63	86.047	ENSRROG00000017210	SREK1	93	79.167	Rhinopithecus_roxellana
ENSPMEG00000006607	-	85	71.552	ENSSBOG00000031230	SREK1	93	79.167	Saimiri_boliviensis_boliviensis
ENSPMEG00000006607	-	64	67.816	ENSSBOG00000033461	SRSF11	68	68.182	Saimiri_boliviensis_boliviensis
ENSPMEG00000006607	-	70	61.053	ENSSFOG00015016086	-	85	61.053	Scleropages_formosus
ENSPMEG00000006607	-	63	96.471	ENSSDUG00000010395	-	84	96.471	Seriola_dumerili
ENSPMEG00000006607	-	76	59.223	ENSSLDG00000012105	-	92	59.223	Seriola_lalandi_dorsalis
ENSPMEG00000006607	-	60	67.073	ENSSLDG00000015477	-	84	67.073	Seriola_lalandi_dorsalis
ENSPMEG00000006607	-	63	96.471	ENSSLDG00000016285	-	84	96.471	Seriola_lalandi_dorsalis
ENSPMEG00000006607	-	61	67.470	ENSSPAG00000016483	-	66	67.470	Stegastes_partitus
ENSPMEG00000006607	-	63	95.294	ENSSPAG00000022310	-	86	95.294	Stegastes_partitus
ENSPMEG00000006607	-	88	78.862	ENSTRUG00000022058	-	98	78.862	Takifugu_rubripes
ENSPMEG00000006607	-	64	67.816	ENSUAMG00000008403	-	68	68.182	Ursus_americanus
ENSPMEG00000006607	-	60	90.123	ENSUAMG00000022662	-	75	89.024	Ursus_americanus
ENSPMEG00000006607	-	85	72.414	ENSVVUG00000005888	-	92	79.381	Vulpes_vulpes
ENSPMEG00000006607	-	61	67.470	ENSXCOG00000015127	-	89	67.470	Xiphophorus_couchianus
ENSPMEG00000006607	-	93	95.276	ENSXCOG00000017792	-	98	95.276	Xiphophorus_couchianus
ENSPMEG00000006607	-	74	61.000	ENSXCOG00000003220	-	80	61.000	Xiphophorus_couchianus
ENSPMEG00000006607	-	88	98.319	ENSXMAG00000028210	-	98	98.319	Xiphophorus_maculatus
ENSPMEG00000006607	-	60	69.136	ENSXMAG00000019180	SRSF11	54	69.136	Xiphophorus_maculatus