EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000006624 (Gene tree)
Gene ID: 106905280
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 13217 bases
Position: chrKQ551056.1:295760-308976
Accession: 106905280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000005280	RNase_Zc3h12a	PF11977.8	2.7e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000007762	-	5752	XM_014969993	ENSPMEP00000005280	932 (aa)	XP_014825479	UPI00072DE1F0

Gene Model

Click here to download ENSPMEG00000006624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000006624	-	89	40.509	ENSPMEG00000002552	zc3h12b	65	58.500
ENSPMEG00000006624	-	85	47.932	ENSPMEG00000011676	-	50	61.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006624	-	79	79.288	ENSAPOG00000015355	-	82	80.053	Acanthochromis_polyacanthus
ENSPMEG00000006624	-	70	65.385	ENSAPOG00000001632	-	84	65.385	Acanthochromis_polyacanthus
ENSPMEG00000006624	-	100	68.177	ENSACIG00000001362	-	97	69.853	Amphilophus_citrinellus
ENSPMEG00000006624	-	99	77.985	ENSAOCG00000003866	-	100	82.836	Amphiprion_ocellaris
ENSPMEG00000006624	-	100	72.936	ENSAPEG00000005727	-	99	84.211	Amphiprion_percula
ENSPMEG00000006624	-	73	75.543	ENSAPEG00000018582	-	99	84.211	Amphiprion_percula
ENSPMEG00000006624	-	99	43.539	ENSATEG00000002260	-	83	78.723	Anabas_testudineus
ENSPMEG00000006624	-	100	75.851	ENSATEG00000004134	-	100	76.987	Anabas_testudineus
ENSPMEG00000006624	-	64	53.583	ENSACLG00000018493	-	99	44.057	Astatotilapia_calliptera
ENSPMEG00000006624	-	100	75.851	ENSACLG00000027924	-	100	76.289	Astatotilapia_calliptera
ENSPMEG00000006624	-	65	50.078	ENSCSEG00000008542	-	68	51.562	Cynoglossus_semilaevis
ENSPMEG00000006624	-	87	73.128	ENSCSEG00000010073	-	96	80.427	Cynoglossus_semilaevis
ENSPMEG00000006624	-	100	84.249	ENSCVAG00000002328	-	100	83.898	Cyprinodon_variegatus
ENSPMEG00000006624	-	65	54.545	ENSELUG00000005470	-	100	46.091	Esox_lucius
ENSPMEG00000006624	-	85	55.995	ENSELUG00000009319	-	95	55.377	Esox_lucius
ENSPMEG00000006624	-	92	91.837	ENSFHEG00000021225	-	100	91.837	Fundulus_heteroclitus
ENSPMEG00000006624	-	73	45.180	ENSGMOG00000017975	-	100	45.468	Gadus_morhua
ENSPMEG00000006624	-	100	92.827	ENSGAFG00000005290	-	100	92.291	Gambusia_affinis
ENSPMEG00000006624	-	73	69.679	ENSGACG00000014201	-	100	70.845	Gasterosteus_aculeatus
ENSPMEG00000006624	-	73	45.225	ENSGACG00000001339	-	99	45.138	Gasterosteus_aculeatus
ENSPMEG00000006624	-	100	75.645	ENSHBUG00000006831	-	100	76.186	Haplochromis_burtoni
ENSPMEG00000006624	-	100	62.131	ENSHCOG00000008878	-	99	83.333	Hippocampus_comes
ENSPMEG00000006624	-	100	78.284	ENSKMAG00000011694	-	100	78.708	Kryptolebias_marmoratus
ENSPMEG00000006624	-	100	75.180	ENSLBEG00000003547	-	100	75.851	Labrus_bergylta
ENSPMEG00000006624	-	86	45.829	ENSLBEG00000012710	-	99	43.513	Labrus_bergylta
ENSPMEG00000006624	-	97	74.865	ENSLBEG00000012554	-	99	79.526	Labrus_bergylta
ENSPMEG00000006624	-	55	57.606	ENSLACG00000017365	ZC3H12A	58	60.870	Latimeria_chalumnae
ENSPMEG00000006624	-	99	44.400	ENSMAMG00000020372	-	99	43.769	Mastacembelus_armatus
ENSPMEG00000006624	-	92	75.868	ENSMAMG00000021794	-	94	88.235	Mastacembelus_armatus
ENSPMEG00000006624	-	64	53.583	ENSMZEG00005019137	-	90	67.532	Maylandia_zebra
ENSPMEG00000006624	-	100	75.851	ENSMZEG00005007718	-	100	76.289	Maylandia_zebra
ENSPMEG00000006624	-	87	48.057	ENSMMOG00000019526	-	93	43.662	Mola_mola
ENSPMEG00000006624	-	94	73.520	ENSMMOG00000005728	-	98	79.332	Mola_mola
ENSPMEG00000006624	-	100	73.864	ENSMALG00000010501	-	100	74.560	Monopterus_albus
ENSPMEG00000006624	-	64	52.039	ENSNBRG00000012175	-	90	68.182	Neolamprologus_brichardi
ENSPMEG00000006624	-	100	75.748	ENSNBRG00000006978	-	100	76.186	Neolamprologus_brichardi
ENSPMEG00000006624	-	100	75.773	ENSONIG00000012268	-	100	76.416	Oreochromis_niloticus
ENSPMEG00000006624	-	100	64.530	ENSORLG00000029243	-	98	75.333	Oryzias_latipes
ENSPMEG00000006624	-	100	72.843	ENSORLG00020017005	-	100	73.163	Oryzias_latipes_hni
ENSPMEG00000006624	-	100	72.476	ENSORLG00015015211	-	100	72.987	Oryzias_latipes_hsok
ENSPMEG00000006624	-	100	72.071	ENSOMEG00000006666	-	100	74.101	Oryzias_melastigma
ENSPMEG00000006624	-	57	58.045	ENSPMGG00000020126	-	51	58.038	Periophthalmus_magnuspinnatus
ENSPMEG00000006624	-	65	78.730	ENSPMGG00000009790	-	95	81.271	Periophthalmus_magnuspinnatus
ENSPMEG00000006624	-	100	98.391	ENSPLAG00000009867	-	100	98.391	Poecilia_latipinna
ENSPMEG00000006624	-	100	97.318	ENSPREG00000010838	-	100	97.318	Poecilia_reticulata
ENSPMEG00000006624	-	85	47.585	ENSPREG00000001607	-	73	78.855	Poecilia_reticulata
ENSPMEG00000006624	-	100	75.701	ENSSMAG00000007545	-	100	76.116	Scophthalmus_maximus
ENSPMEG00000006624	-	99	43.411	ENSSMAG00000007258	-	99	43.756	Scophthalmus_maximus
ENSPMEG00000006624	-	100	77.152	ENSSDUG00000021864	-	100	77.949	Seriola_dumerili
ENSPMEG00000006624	-	99	45.171	ENSSDUG00000013237	-	90	66.000	Seriola_dumerili
ENSPMEG00000006624	-	100	76.947	ENSSLDG00000012268	-	100	77.618	Seriola_lalandi_dorsalis
ENSPMEG00000006624	-	99	45.428	ENSSLDG00000004886	-	99	44.990	Seriola_lalandi_dorsalis
ENSPMEG00000006624	-	100	76.585	ENSSPAG00000009485	-	100	77.618	Stegastes_partitus
ENSPMEG00000006624	-	99	46.293	ENSSPAG00000001850	-	99	44.257	Stegastes_partitus
ENSPMEG00000006624	-	99	71.859	ENSTRUG00000022519	-	99	72.928	Takifugu_rubripes
ENSPMEG00000006624	-	74	68.000	ENSTNIG00000014519	-	100	82.979	Tetraodon_nigroviridis
ENSPMEG00000006624	-	100	95.494	ENSXMAG00000027171	-	100	95.494	Xiphophorus_maculatus