EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000006634 (Gene tree)
Gene ID: 106906775
Gene Symbol: urb1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 20595 bases
Position: chrKQ553398.1:55191-75785
Accession: 106906775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000005284	Npa1	PF11707.8	4.1e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000007749	-	7335	XM_014972190	ENSPMEP00000005284	2246 (aa)	XP_014827676	UPI00072DF07A

Gene Model

Click here to download ENSPMEG00000006634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006634's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006634	urb1	98	43.585	ENSG00000142207	URB1	98	43.525	Homo_sapiens
ENSPMEG00000006634	urb1	100	69.510	ENSAPOG00000020308	urb1	100	69.408	Acanthochromis_polyacanthus
ENSPMEG00000006634	urb1	99	43.816	ENSAMEG00000011998	URB1	99	43.953	Ailuropoda_melanoleuca
ENSPMEG00000006634	urb1	95	66.698	ENSACIG00000003248	urb1	97	66.604	Amphilophus_citrinellus
ENSPMEG00000006634	urb1	100	66.421	ENSAOCG00000010364	urb1	100	66.354	Amphiprion_ocellaris
ENSPMEG00000006634	urb1	97	74.520	ENSAPEG00000010758	urb1	99	74.414	Amphiprion_percula
ENSPMEG00000006634	urb1	100	69.752	ENSATEG00000011790	urb1	100	69.752	Anabas_testudineus
ENSPMEG00000006634	urb1	97	45.209	ENSAPLG00000012791	URB1	99	45.299	Anas_platyrhynchos
ENSPMEG00000006634	urb1	99	44.493	ENSACAG00000002817	URB1	99	44.581	Anolis_carolinensis
ENSPMEG00000006634	urb1	98	44.038	ENSANAG00000024617	URB1	98	43.975	Aotus_nancymaae
ENSPMEG00000006634	urb1	100	70.474	ENSACLG00000024865	urb1	100	70.474	Astatotilapia_calliptera
ENSPMEG00000006634	urb1	99	49.531	ENSAMXG00000012306	urb1	99	49.246	Astyanax_mexicanus
ENSPMEG00000006634	urb1	98	43.453	ENSBTAG00000012412	URB1	98	43.656	Bos_taurus
ENSPMEG00000006634	urb1	98	43.373	ENSCJAG00000009118	URB1	98	43.314	Callithrix_jacchus
ENSPMEG00000006634	urb1	99	43.349	ENSCAFG00000008892	URB1	99	43.349	Canis_familiaris
ENSPMEG00000006634	urb1	99	42.719	ENSCAFG00020025994	-	99	42.719	Canis_lupus_dingo
ENSPMEG00000006634	urb1	99	43.114	ENSCAFG00020025987	-	99	43.114	Canis_lupus_dingo
ENSPMEG00000006634	urb1	99	43.663	ENSCHIG00000015645	URB1	99	43.663	Capra_hircus
ENSPMEG00000006634	urb1	99	43.185	ENSTSYG00000013286	URB1	99	43.185	Carlito_syrichta
ENSPMEG00000006634	urb1	98	42.397	ENSCAPG00000015589	URB1	99	42.397	Cavia_aperea
ENSPMEG00000006634	urb1	99	43.222	ENSCPOG00000006748	URB1	99	43.222	Cavia_porcellus
ENSPMEG00000006634	urb1	98	44.032	ENSCCAG00000021299	URB1	98	44.014	Cebus_capucinus
ENSPMEG00000006634	urb1	98	43.825	ENSCATG00000042630	URB1	99	43.786	Cercocebus_atys
ENSPMEG00000006634	urb1	98	44.237	ENSCLAG00000005262	URB1	98	44.237	Chinchilla_lanigera
ENSPMEG00000006634	urb1	98	43.225	ENSCSAG00000009584	URB1	99	43.191	Chlorocebus_sabaeus
ENSPMEG00000006634	urb1	99	46.084	ENSCPBG00000006454	URB1	99	46.214	Chrysemys_picta_bellii
ENSPMEG00000006634	urb1	98	43.934	ENSCANG00000031088	URB1	99	43.894	Colobus_angolensis_palliatus
ENSPMEG00000006634	urb1	98	43.856	ENSCGRG00001010616	Urb1	99	43.714	Cricetulus_griseus_chok1gshd
ENSPMEG00000006634	urb1	97	43.885	ENSCGRG00000015840	Urb1	99	43.885	Cricetulus_griseus_crigri
ENSPMEG00000006634	urb1	100	62.621	ENSCSEG00000012616	urb1	99	62.621	Cynoglossus_semilaevis
ENSPMEG00000006634	urb1	92	84.321	ENSCVAG00000009076	urb1	99	84.321	Cyprinodon_variegatus
ENSPMEG00000006634	urb1	99	51.785	ENSDARG00000060308	urb1	99	52.093	Danio_rerio
ENSPMEG00000006634	urb1	85	46.856	ENSDNOG00000015586	URB1	99	46.907	Dasypus_novemcinctus
ENSPMEG00000006634	urb1	99	44.283	ENSDORG00000006735	Urb1	99	44.205	Dipodomys_ordii
ENSPMEG00000006634	urb1	91	52.622	ENSETEG00000009080	URB1	91	52.622	Echinops_telfairi
ENSPMEG00000006634	urb1	99	42.901	ENSEASG00005007711	URB1	99	44.427	Equus_asinus_asinus
ENSPMEG00000006634	urb1	92	54.795	ENSECAG00000013206	URB1	99	46.898	Equus_caballus
ENSPMEG00000006634	urb1	52	56.485	ENSEEUG00000003626	-	53	56.485	Erinaceus_europaeus
ENSPMEG00000006634	urb1	99	55.097	ENSELUG00000020516	urb1	99	55.268	Esox_lucius
ENSPMEG00000006634	urb1	99	43.078	ENSFCAG00000002177	URB1	99	43.078	Felis_catus
ENSPMEG00000006634	urb1	98	41.506	ENSFALG00000004636	URB1	99	41.685	Ficedula_albicollis
ENSPMEG00000006634	urb1	99	43.670	ENSFDAG00000007288	URB1	95	43.556	Fukomys_damarensis
ENSPMEG00000006634	urb1	100	74.878	ENSFHEG00000000202	urb1	99	79.594	Fundulus_heteroclitus
ENSPMEG00000006634	urb1	93	57.380	ENSGMOG00000001838	urb1	94	57.380	Gadus_morhua
ENSPMEG00000006634	urb1	99	45.551	ENSGALG00000015887	URB1	98	45.551	Gallus_gallus
ENSPMEG00000006634	urb1	99	87.539	ENSGAFG00000020694	urb1	99	89.175	Gambusia_affinis
ENSPMEG00000006634	urb1	99	67.646	ENSGACG00000011703	urb1	99	67.646	Gasterosteus_aculeatus
ENSPMEG00000006634	urb1	99	45.826	ENSGAGG00000022544	URB1	99	45.826	Gopherus_agassizii
ENSPMEG00000006634	urb1	98	43.770	ENSGGOG00000000285	URB1	98	43.708	Gorilla_gorilla
ENSPMEG00000006634	urb1	100	70.562	ENSHBUG00000001904	urb1	100	70.562	Haplochromis_burtoni
ENSPMEG00000006634	urb1	99	43.030	ENSHGLG00000004907	URB1	99	43.030	Heterocephalus_glaber_female
ENSPMEG00000006634	urb1	99	43.446	ENSHGLG00100010749	URB1	99	43.446	Heterocephalus_glaber_male
ENSPMEG00000006634	urb1	74	60.819	ENSHCOG00000018683	urb1	99	61.027	Hippocampus_comes
ENSPMEG00000006634	urb1	99	48.070	ENSIPUG00000014721	urb1	99	48.070	Ictalurus_punctatus
ENSPMEG00000006634	urb1	98	44.052	ENSSTOG00000004539	URB1	99	43.767	Ictidomys_tridecemlineatus
ENSPMEG00000006634	urb1	99	67.806	ENSKMAG00000006001	urb1	99	73.709	Kryptolebias_marmoratus
ENSPMEG00000006634	urb1	97	63.042	ENSLBEG00000027208	urb1	99	63.042	Labrus_bergylta
ENSPMEG00000006634	urb1	99	43.990	ENSLACG00000017059	URB1	100	44.181	Latimeria_chalumnae
ENSPMEG00000006634	urb1	99	52.159	ENSLOCG00000009190	urb1	99	52.159	Lepisosteus_oculatus
ENSPMEG00000006634	urb1	99	43.474	ENSLAFG00000010407	URB1	99	43.474	Loxodonta_africana
ENSPMEG00000006634	urb1	98	43.736	ENSMFAG00000034391	URB1	95	43.653	Macaca_fascicularis
ENSPMEG00000006634	urb1	98	43.742	ENSMMUG00000010295	URB1	99	43.703	Macaca_mulatta
ENSPMEG00000006634	urb1	98	43.195	ENSMNEG00000032981	URB1	99	43.034	Macaca_nemestrina
ENSPMEG00000006634	urb1	98	44.023	ENSMLEG00000041435	URB1	99	43.938	Mandrillus_leucophaeus
ENSPMEG00000006634	urb1	99	66.476	ENSMAMG00000011238	urb1	99	66.476	Mastacembelus_armatus
ENSPMEG00000006634	urb1	100	66.344	ENSMZEG00005011862	urb1	100	66.344	Maylandia_zebra
ENSPMEG00000006634	urb1	97	45.360	ENSMGAG00000014512	URB1	98	45.360	Meleagris_gallopavo
ENSPMEG00000006634	urb1	92	52.924	ENSMAUG00000010516	Urb1	99	52.346	Mesocricetus_auratus
ENSPMEG00000006634	urb1	99	43.601	ENSMICG00000016424	URB1	99	43.429	Microcebus_murinus
ENSPMEG00000006634	urb1	99	43.289	ENSMOCG00000012613	Urb1	99	43.333	Microtus_ochrogaster
ENSPMEG00000006634	urb1	99	43.385	ENSMODG00000021076	URB1	99	43.385	Monodelphis_domestica
ENSPMEG00000006634	urb1	99	64.555	ENSMALG00000017411	urb1	99	64.510	Monopterus_albus
ENSPMEG00000006634	urb1	99	43.413	MGP_CAROLIEiJ_G0020948	Urb1	99	43.413	Mus_caroli
ENSPMEG00000006634	urb1	99	43.463	ENSMUSG00000039929	Urb1	99	43.463	Mus_musculus
ENSPMEG00000006634	urb1	99	42.920	MGP_PahariEiJ_G0016653	Urb1	99	42.845	Mus_pahari
ENSPMEG00000006634	urb1	99	43.546	MGP_SPRETEiJ_G0021854	Urb1	99	43.546	Mus_spretus
ENSPMEG00000006634	urb1	99	43.459	ENSMPUG00000001123	URB1	99	43.459	Mustela_putorius_furo
ENSPMEG00000006634	urb1	99	43.065	ENSNGAG00000001905	Urb1	99	43.109	Nannospalax_galili
ENSPMEG00000006634	urb1	82	67.571	ENSNBRG00000001049	urb1	99	68.850	Neolamprologus_brichardi
ENSPMEG00000006634	urb1	98	42.653	ENSNLEG00000026872	URB1	98	42.641	Nomascus_leucogenys
ENSPMEG00000006634	urb1	90	56.296	ENSMEUG00000010828	URB1	95	41.165	Notamacropus_eugenii
ENSPMEG00000006634	urb1	98	42.609	ENSOPRG00000013482	URB1	99	42.622	Ochotona_princeps
ENSPMEG00000006634	urb1	99	43.572	ENSODEG00000002587	URB1	99	43.440	Octodon_degus
ENSPMEG00000006634	urb1	100	71.018	ENSONIG00000005599	urb1	100	71.018	Oreochromis_niloticus
ENSPMEG00000006634	urb1	99	44.385	ENSOCUG00000009381	URB1	99	44.346	Oryctolagus_cuniculus
ENSPMEG00000006634	urb1	99	68.262	ENSORLG00000003429	urb1	99	68.262	Oryzias_latipes
ENSPMEG00000006634	urb1	99	67.788	ENSORLG00020013785	urb1	99	67.834	Oryzias_latipes_hni
ENSPMEG00000006634	urb1	99	64.996	ENSORLG00015019421	urb1	99	66.771	Oryzias_latipes_hsok
ENSPMEG00000006634	urb1	80	70.498	ENSOMEG00000002094	urb1	99	70.498	Oryzias_melastigma
ENSPMEG00000006634	urb1	98	43.920	ENSOGAG00000017140	URB1	98	44.053	Otolemur_garnettii
ENSPMEG00000006634	urb1	95	48.017	ENSOARG00000013679	URB1	99	47.619	Ovis_aries
ENSPMEG00000006634	urb1	98	43.610	ENSPPAG00000003423	URB1	98	43.550	Pan_paniscus
ENSPMEG00000006634	urb1	99	43.142	ENSPPRG00000023131	URB1	99	43.142	Panthera_pardus
ENSPMEG00000006634	urb1	87	44.757	ENSPTIG00000016125	URB1	93	44.757	Panthera_tigris_altaica
ENSPMEG00000006634	urb1	98	43.521	ENSPTRG00000013852	URB1	98	43.461	Pan_troglodytes
ENSPMEG00000006634	urb1	98	43.979	ENSPANG00000021964	URB1	99	43.894	Papio_anubis
ENSPMEG00000006634	urb1	99	52.081	ENSPKIG00000003683	urb1	99	52.168	Paramormyrops_kingsleyae
ENSPMEG00000006634	urb1	99	43.046	ENSPEMG00000021205	Urb1	98	43.046	Peromyscus_maniculatus_bairdii
ENSPMEG00000006634	urb1	80	32.572	ENSPMAG00000009733	URB1	99	32.713	Petromyzon_marinus
ENSPMEG00000006634	urb1	99	42.977	ENSPCIG00000016350	URB1	99	43.324	Phascolarctos_cinereus
ENSPMEG00000006634	urb1	97	98.024	ENSPLAG00000004371	urb1	100	98.024	Poecilia_latipinna
ENSPMEG00000006634	urb1	100	95.685	ENSPREG00000013453	urb1	100	95.685	Poecilia_reticulata
ENSPMEG00000006634	urb1	99	43.611	ENSPPYG00000011359	URB1	99	43.611	Pongo_abelii
ENSPMEG00000006634	urb1	99	39.220	ENSPCAG00000007430	URB1	99	39.264	Procavia_capensis
ENSPMEG00000006634	urb1	99	42.701	ENSPCOG00000022695	URB1	99	42.926	Propithecus_coquereli
ENSPMEG00000006634	urb1	99	42.632	ENSPVAG00000000889	URB1	99	42.632	Pteropus_vampyrus
ENSPMEG00000006634	urb1	100	67.139	ENSPNYG00000010589	urb1	100	67.139	Pundamilia_nyererei
ENSPMEG00000006634	urb1	99	49.447	ENSPNAG00000019324	urb1	99	49.343	Pygocentrus_nattereri
ENSPMEG00000006634	urb1	99	43.668	ENSRNOG00000002080	Urb1	99	43.668	Rattus_norvegicus
ENSPMEG00000006634	urb1	98	43.711	ENSRBIG00000033122	URB1	99	43.673	Rhinopithecus_bieti
ENSPMEG00000006634	urb1	98	43.686	ENSRROG00000040237	URB1	99	43.648	Rhinopithecus_roxellana
ENSPMEG00000006634	urb1	98	44.062	ENSSBOG00000027672	URB1	98	44.000	Saimiri_boliviensis_boliviensis
ENSPMEG00000006634	urb1	99	43.202	ENSSHAG00000005140	URB1	99	43.246	Sarcophilus_harrisii
ENSPMEG00000006634	urb1	93	54.796	ENSSFOG00015000339	urb1	99	54.839	Scleropages_formosus
ENSPMEG00000006634	urb1	100	69.797	ENSSMAG00000003782	urb1	100	69.810	Scophthalmus_maximus
ENSPMEG00000006634	urb1	100	72.655	ENSSDUG00000012313	urb1	99	72.655	Seriola_dumerili
ENSPMEG00000006634	urb1	100	72.434	ENSSLDG00000023179	urb1	99	72.434	Seriola_lalandi_dorsalis
ENSPMEG00000006634	urb1	99	43.723	ENSSPUG00000012447	URB1	99	43.766	Sphenodon_punctatus
ENSPMEG00000006634	urb1	99	71.492	ENSSPAG00000006325	urb1	99	71.447	Stegastes_partitus
ENSPMEG00000006634	urb1	98	43.703	ENSSSCG00000032024	URB1	98	43.747	Sus_scrofa
ENSPMEG00000006634	urb1	74	47.390	ENSTGUG00000013442	URB1	100	47.331	Taeniopygia_guttata
ENSPMEG00000006634	urb1	99	64.821	ENSTRUG00000009372	urb1	99	64.821	Takifugu_rubripes
ENSPMEG00000006634	urb1	99	62.951	ENSTNIG00000016277	urb1	99	62.951	Tetraodon_nigroviridis
ENSPMEG00000006634	urb1	77	47.006	ENSTBEG00000010044	URB1	78	47.006	Tupaia_belangeri
ENSPMEG00000006634	urb1	90	49.687	ENSTTRG00000007712	URB1	91	49.791	Tursiops_truncatus
ENSPMEG00000006634	urb1	99	43.591	ENSUAMG00000012231	URB1	99	43.684	Ursus_americanus
ENSPMEG00000006634	urb1	88	45.651	ENSUMAG00000017419	URB1	94	45.653	Ursus_maritimus
ENSPMEG00000006634	urb1	65	63.946	ENSVPAG00000001164	URB1	67	63.946	Vicugna_pacos
ENSPMEG00000006634	urb1	99	43.616	ENSVVUG00000000551	URB1	99	43.616	Vulpes_vulpes
ENSPMEG00000006634	urb1	99	43.926	ENSXETG00000009895	urb1	99	43.644	Xenopus_tropicalis
ENSPMEG00000006634	urb1	100	86.933	ENSXCOG00000005500	urb1	99	88.987	Xiphophorus_couchianus
ENSPMEG00000006634	urb1	100	87.506	ENSXMAG00000007253	urb1	99	89.138	Xiphophorus_maculatus