EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000006764 (Gene tree)
Gene ID: 106905196
Gene Symbol: -
Alias: -
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 29191 bases
Position: chrKQ553074.1:31023-60213
Accession: 106905196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000005387	RRM_5	PF13893.6	9.1e-08	1	2
ENSPMEP00000005387	RRM_5	PF13893.6	9.1e-08	2	2
ENSPMEP00000005387	RRM_1	PF00076.22	4.8e-40	1	3
ENSPMEP00000005387	RRM_1	PF00076.22	4.8e-40	2	3
ENSPMEP00000005387	RRM_1	PF00076.22	4.8e-40	3	3
ENSPMEP00000024464	RRM_1	PF00076.22	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000007600	-	858	-	ENSPMEP00000024464	285 (aa)	-	-
ENSPMET00000007587	-	13595	XM_014969865	ENSPMEP00000005387	3527 (aa)	XP_014825351	UPI00072E83D5

Gene Model

Click here to download ENSPMEG00000006764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006764's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000006764	-	91	69.498	ENSPMEG00000002674	si:ch1073-335m2.2	97	75.635

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006764	-	90	74.340	ENSG00000065526	SPEN	85	90.476	Homo_sapiens
ENSPMEG00000006764	-	88	95.506	ENSAPOG00000009853	-	87	95.531	Acanthochromis_polyacanthus
ENSPMEG00000006764	-	97	83.432	ENSAPOG00000011411	si:ch1073-335m2.2	99	83.432	Acanthochromis_polyacanthus
ENSPMEG00000006764	-	91	73.034	ENSAMEG00000011817	SPEN	96	45.048	Ailuropoda_melanoleuca
ENSPMEG00000006764	-	88	95.506	ENSAOCG00000014505	-	100	79.673	Amphiprion_ocellaris
ENSPMEG00000006764	-	85	77.444	ENSAOCG00000008077	si:ch1073-335m2.2	98	77.444	Amphiprion_ocellaris
ENSPMEG00000006764	-	88	95.506	ENSAPEG00000010288	-	100	79.617	Amphiprion_percula
ENSPMEG00000006764	-	97	83.432	ENSAPEG00000013515	si:ch1073-335m2.2	99	83.432	Amphiprion_percula
ENSPMEG00000006764	-	100	76.925	ENSATEG00000005627	-	100	76.644	Anabas_testudineus
ENSPMEG00000006764	-	97	78.261	ENSATEG00000007674	si:ch1073-335m2.2	99	78.261	Anabas_testudineus
ENSPMEG00000006764	-	80	71.008	ENSAPLG00000012618	SPEN	100	46.245	Anas_platyrhynchos
ENSPMEG00000006764	-	81	66.406	ENSACAG00000013761	SPEN	100	43.218	Anolis_carolinensis
ENSPMEG00000006764	-	87	69.261	ENSANAG00000034428	SPEN	96	44.402	Aotus_nancymaae
ENSPMEG00000006764	-	95	79.070	ENSACLG00000021433	si:ch1073-335m2.2	99	75.758	Astatotilapia_calliptera
ENSPMEG00000006764	-	100	77.005	ENSACLG00000016922	-	100	77.090	Astatotilapia_calliptera
ENSPMEG00000006764	-	87	83.240	ENSAMXG00000012485	spen	100	54.075	Astyanax_mexicanus
ENSPMEG00000006764	-	91	73.034	ENSBTAG00000018729	SPEN	97	44.984	Bos_taurus
ENSPMEG00000006764	-	90	73.962	ENSCJAG00000008527	SPEN	96	44.700	Callithrix_jacchus
ENSPMEG00000006764	-	91	73.783	ENSCAFG00000016132	-	91	51.193	Canis_familiaris
ENSPMEG00000006764	-	91	73.783	ENSCHIG00000025070	SPEN	97	44.595	Capra_hircus
ENSPMEG00000006764	-	90	42.320	ENSTSYG00000036016	SPEN	96	42.625	Carlito_syrichta
ENSPMEG00000006764	-	80	71.548	ENSCAPG00000013803	SPEN	100	43.218	Cavia_aperea
ENSPMEG00000006764	-	80	71.429	ENSCPOG00000014036	SPEN	96	44.991	Cavia_porcellus
ENSPMEG00000006764	-	91	73.783	ENSCCAG00000020258	SPEN	86	41.955	Cebus_capucinus
ENSPMEG00000006764	-	83	85.926	ENSCATG00000015079	SPEN	96	44.394	Cercocebus_atys
ENSPMEG00000006764	-	80	71.429	ENSCLAG00000002018	SPEN	100	42.907	Chinchilla_lanigera
ENSPMEG00000006764	-	90	74.340	ENSCSAG00000000841	SPEN	96	44.554	Chlorocebus_sabaeus
ENSPMEG00000006764	-	91	73.408	ENSCPBG00000010477	SPEN	100	46.470	Chrysemys_picta_bellii
ENSPMEG00000006764	-	88	68.340	ENSCANG00000034547	SPEN	96	42.842	Colobus_angolensis_palliatus
ENSPMEG00000006764	-	90	74.717	ENSCGRG00001007725	Spen	97	45.219	Cricetulus_griseus_chok1gshd
ENSPMEG00000006764	-	71	71.905	ENSCGRG00000010581	Spen	97	43.728	Cricetulus_griseus_crigri
ENSPMEG00000006764	-	99	73.478	ENSCSEG00000003915	-	100	73.478	Cynoglossus_semilaevis
ENSPMEG00000006764	-	100	87.235	ENSCVAG00000016346	-	100	87.179	Cyprinodon_variegatus
ENSPMEG00000006764	-	90	66.773	ENSDARG00000074245	spen	100	91.111	Danio_rerio
ENSPMEG00000006764	-	96	69.725	ENSDARG00000074332	si:ch1073-335m2.2	99	69.725	Danio_rerio
ENSPMEG00000006764	-	91	74.532	ENSDNOG00000041948	SPEN	96	45.512	Dasypus_novemcinctus
ENSPMEG00000006764	-	81	70.833	ENSDORG00000023909	Spen	96	43.602	Dipodomys_ordii
ENSPMEG00000006764	-	80	70.886	ENSETEG00000016692	-	55	60.733	Echinops_telfairi
ENSPMEG00000006764	-	60	63.043	ENSEBUG00000005464	-	63	66.667	Eptatretus_burgeri
ENSPMEG00000006764	-	94	86.029	ENSEASG00005015911	SPEN	96	86.029	Equus_asinus_asinus
ENSPMEG00000006764	-	94	86.029	ENSECAG00000008833	SPEN	96	86.029	Equus_caballus
ENSPMEG00000006764	-	90	72.830	ENSEEUG00000010255	SPEN	59	88.095	Erinaceus_europaeus
ENSPMEG00000006764	-	97	80.000	ENSELUG00000007726	si:ch1073-335m2.2	99	80.105	Esox_lucius
ENSPMEG00000006764	-	78	70.815	ENSFDAG00000010212	SPEN	88	46.417	Fukomys_damarensis
ENSPMEG00000006764	-	98	65.863	ENSFHEG00000004544	si:ch1073-335m2.2	94	65.863	Fundulus_heteroclitus
ENSPMEG00000006764	-	100	96.491	ENSFHEG00000013136	-	100	96.491	Fundulus_heteroclitus
ENSPMEG00000006764	-	97	88.587	ENSGMOG00000008397	-	99	89.011	Gadus_morhua
ENSPMEG00000006764	-	98	74.872	ENSGMOG00000008156	si:ch1073-335m2.2	99	74.872	Gadus_morhua
ENSPMEG00000006764	-	91	73.408	ENSGALG00000036932	SPEN	99	47.183	Gallus_gallus
ENSPMEG00000006764	-	100	99.298	ENSGAFG00000015819	-	100	99.298	Gambusia_affinis
ENSPMEG00000006764	-	91	69.498	ENSGACG00000001176	si:ch1073-335m2.2	100	41.264	Gasterosteus_aculeatus
ENSPMEG00000006764	-	90	87.547	ENSGACG00000005341	-	100	71.413	Gasterosteus_aculeatus
ENSPMEG00000006764	-	91	73.408	ENSGAGG00000020785	SPEN	100	47.434	Gopherus_agassizii
ENSPMEG00000006764	-	90	74.340	ENSGGOG00000012041	SPEN	85	48.485	Gorilla_gorilla
ENSPMEG00000006764	-	100	77.055	ENSHBUG00000020626	-	100	77.055	Haplochromis_burtoni
ENSPMEG00000006764	-	95	79.070	ENSHBUG00000023253	si:ch1073-335m2.2	99	76.263	Haplochromis_burtoni
ENSPMEG00000006764	-	90	74.060	ENSHGLG00000019259	SPEN	83	55.793	Heterocephalus_glaber_female
ENSPMEG00000006764	-	78	70.386	ENSHGLG00100019294	SPEN	75	55.355	Heterocephalus_glaber_male
ENSPMEG00000006764	-	90	75.875	ENSHCOG00000002791	-	90	75.875	Hippocampus_comes
ENSPMEG00000006764	-	93	81.102	ENSHCOG00000006004	si:ch1073-335m2.2	99	81.102	Hippocampus_comes
ENSPMEG00000006764	-	89	65.287	ENSIPUG00000021668	spen	100	52.278	Ictalurus_punctatus
ENSPMEG00000006764	-	94	65.919	ENSIPUG00000018212	si:ch1073-335m2.2	99	65.919	Ictalurus_punctatus
ENSPMEG00000006764	-	78	70.690	ENSSTOG00000021428	SPEN	97	44.292	Ictidomys_tridecemlineatus
ENSPMEG00000006764	-	90	74.717	ENSJJAG00000010882	Spen	98	45.513	Jaculus_jaculus
ENSPMEG00000006764	-	88	94.382	ENSKMAG00000003882	-	100	79.932	Kryptolebias_marmoratus
ENSPMEG00000006764	-	84	70.819	ENSLBEG00000019129	-	100	70.819	Labrus_bergylta
ENSPMEG00000006764	-	90	83.203	ENSLBEG00000019151	-	88	84.722	Labrus_bergylta
ENSPMEG00000006764	-	89	75.665	ENSLACG00000003258	SPEN	99	84.472	Latimeria_chalumnae
ENSPMEG00000006764	-	97	84.138	ENSLOCG00000007896	si:ch1073-335m2.2	97	84.138	Lepisosteus_oculatus
ENSPMEG00000006764	-	90	66.415	ENSLAFG00000004524	SPEN	97	43.663	Loxodonta_africana
ENSPMEG00000006764	-	90	74.340	ENSMFAG00000041974	SPEN	96	43.979	Macaca_fascicularis
ENSPMEG00000006764	-	90	74.340	ENSMMUG00000008026	SPEN	90	47.922	Macaca_mulatta
ENSPMEG00000006764	-	90	74.340	ENSMNEG00000042402	SPEN	90	47.924	Macaca_nemestrina
ENSPMEG00000006764	-	90	67.170	ENSMLEG00000039293	SPEN	96	43.763	Mandrillus_leucophaeus
ENSPMEG00000006764	-	90	89.313	ENSMAMG00000014536	-	87	93.855	Mastacembelus_armatus
ENSPMEG00000006764	-	97	75.510	ENSMAMG00000023870	si:ch1073-335m2.2	99	79.651	Mastacembelus_armatus
ENSPMEG00000006764	-	89	75.174	ENSMZEG00005021491	-	99	75.174	Maylandia_zebra
ENSPMEG00000006764	-	95	79.070	ENSMZEG00005011762	si:ch1073-335m2.2	99	75.758	Maylandia_zebra
ENSPMEG00000006764	-	91	73.408	ENSMGAG00000005180	-	85	89.683	Meleagris_gallopavo
ENSPMEG00000006764	-	90	74.340	ENSMAUG00000008318	Spen	93	51.391	Mesocricetus_auratus
ENSPMEG00000006764	-	90	73.585	ENSMICG00000030994	SPEN	68	56.550	Microcebus_murinus
ENSPMEG00000006764	-	91	74.157	ENSMOCG00000016083	Spen	97	43.182	Microtus_ochrogaster
ENSPMEG00000006764	-	93	74.211	ENSMMOG00000021742	si:ch1073-335m2.2	99	79.070	Mola_mola
ENSPMEG00000006764	-	90	92.578	ENSMMOG00000017059	-	90	92.578	Mola_mola
ENSPMEG00000006764	-	91	73.507	ENSMODG00000003411	SPEN	100	44.777	Monodelphis_domestica
ENSPMEG00000006764	-	86	94.944	ENSMALG00000008625	-	100	76.992	Monopterus_albus
ENSPMEG00000006764	-	91	73.783	MGP_CAROLIEiJ_G0026745	Spen	97	44.943	Mus_caroli
ENSPMEG00000006764	-	91	73.783	ENSMUSG00000040761	Spen	97	44.202	Mus_musculus
ENSPMEG00000006764	-	90	73.962	MGP_PahariEiJ_G0029076	Spen	97	44.342	Mus_pahari
ENSPMEG00000006764	-	91	73.783	MGP_SPRETEiJ_G0027724	Spen	97	44.733	Mus_spretus
ENSPMEG00000006764	-	65	80.874	ENSMPUG00000016317	SPEN	96	44.265	Mustela_putorius_furo
ENSPMEG00000006764	-	93	87.097	ENSMLUG00000010144	SPEN	94	87.097	Myotis_lucifugus
ENSPMEG00000006764	-	90	73.962	ENSNGAG00000000641	Spen	98	47.740	Nannospalax_galili
ENSPMEG00000006764	-	95	79.651	ENSNBRG00000005733	si:ch1073-335m2.2	99	75.758	Neolamprologus_brichardi
ENSPMEG00000006764	-	85	74.104	ENSNBRG00000022090	-	100	74.369	Neolamprologus_brichardi
ENSPMEG00000006764	-	81	71.667	ENSNLEG00000007652	SPEN	82	69.828	Nomascus_leucogenys
ENSPMEG00000006764	-	76	82.292	ENSMEUG00000002422	SPEN	89	82.292	Notamacropus_eugenii
ENSPMEG00000006764	-	80	71.730	ENSOPRG00000015800	SPEN	83	63.628	Ochotona_princeps
ENSPMEG00000006764	-	90	74.060	ENSODEG00000016644	SPEN	100	42.540	Octodon_degus
ENSPMEG00000006764	-	90	90.421	ENSONIG00000006573	-	99	87.037	Oreochromis_niloticus
ENSPMEG00000006764	-	80	69.748	ENSOANG00000004165	-	100	70.506	Ornithorhynchus_anatinus
ENSPMEG00000006764	-	90	60.300	ENSOCUG00000010840	SPEN	97	42.537	Oryctolagus_cuniculus
ENSPMEG00000006764	-	87	65.247	ENSORLG00000028894	-	100	65.279	Oryzias_latipes
ENSPMEG00000006764	-	87	65.688	ENSORLG00020007735	-	100	65.688	Oryzias_latipes_hni
ENSPMEG00000006764	-	94	83.230	ENSORLG00015005537	si:ch1073-335m2.2	99	83.230	Oryzias_latipes_hsok
ENSPMEG00000006764	-	100	67.737	ENSORLG00015022085	-	100	67.794	Oryzias_latipes_hsok
ENSPMEG00000006764	-	100	67.550	ENSOMEG00000007639	-	100	67.381	Oryzias_melastigma
ENSPMEG00000006764	-	90	73.962	ENSOGAG00000025110	SPEN	96	43.919	Otolemur_garnettii
ENSPMEG00000006764	-	88	68.462	ENSOARG00000008477	SPEN	96	44.398	Ovis_aries
ENSPMEG00000006764	-	81	71.250	ENSPPAG00000035690	SPEN	85	47.709	Pan_paniscus
ENSPMEG00000006764	-	90	74.340	ENSPTRG00000000210	SPEN	85	48.317	Pan_troglodytes
ENSPMEG00000006764	-	90	74.340	ENSPANG00000006293	SPEN	96	43.687	Papio_anubis
ENSPMEG00000006764	-	89	81.467	ENSPKIG00000002617	SPEN	90	84.530	Paramormyrops_kingsleyae
ENSPMEG00000006764	-	97	96.429	ENSPKIG00000010492	si:ch1073-335m2.2	100	96.429	Paramormyrops_kingsleyae
ENSPMEG00000006764	-	81	70.833	ENSPSIG00000008026	SPEN	100	45.762	Pelodiscus_sinensis
ENSPMEG00000006764	-	89	66.160	ENSPEMG00000022997	Spen	97	44.013	Peromyscus_maniculatus_bairdii
ENSPMEG00000006764	-	99	96.875	ENSPFOG00000024806	-	99	90.436	Poecilia_formosa
ENSPMEG00000006764	-	97	75.635	ENSPLAG00000016625	si:ch1073-335m2.2	99	78.488	Poecilia_latipinna
ENSPMEG00000006764	-	100	99.649	ENSPLAG00000001398	-	100	99.699	Poecilia_latipinna
ENSPMEG00000006764	-	76	70.370	ENSPREG00000005357	si:ch1073-335m2.2	99	78.488	Poecilia_reticulata
ENSPMEG00000006764	-	100	98.947	ENSPREG00000010399	-	100	98.947	Poecilia_reticulata
ENSPMEG00000006764	-	90	74.340	ENSPPYG00000001834	SPEN	85	48.463	Pongo_abelii
ENSPMEG00000006764	-	88	68.966	ENSPCAG00000009543	SPEN	87	68.966	Procavia_capensis
ENSPMEG00000006764	-	90	73.208	ENSPCOG00000021735	SPEN	96	43.567	Propithecus_coquereli
ENSPMEG00000006764	-	91	73.034	ENSPVAG00000013794	SPEN	76	59.250	Pteropus_vampyrus
ENSPMEG00000006764	-	100	77.111	ENSPNYG00000012379	-	100	77.111	Pundamilia_nyererei
ENSPMEG00000006764	-	95	79.070	ENSPNYG00000009042	si:ch1073-335m2.2	99	75.758	Pundamilia_nyererei
ENSPMEG00000006764	-	87	85.311	ENSPNAG00000020795	spen	87	79.389	Pygocentrus_nattereri
ENSPMEG00000006764	-	97	73.171	ENSPNAG00000011452	si:ch1073-335m2.2	99	73.171	Pygocentrus_nattereri
ENSPMEG00000006764	-	81	71.250	ENSRNOG00000033556	Spen	97	43.980	Rattus_norvegicus
ENSPMEG00000006764	-	89	68.702	ENSRBIG00000039654	SPEN	96	44.055	Rhinopithecus_bieti
ENSPMEG00000006764	-	90	68.302	ENSRROG00000035686	SPEN	96	44.008	Rhinopithecus_roxellana
ENSPMEG00000006764	-	81	71.667	ENSSBOG00000028770	SPEN	85	48.258	Saimiri_boliviensis_boliviensis
ENSPMEG00000006764	-	83	69.636	ENSSHAG00000004960	SPEN	99	70.415	Sarcophilus_harrisii
ENSPMEG00000006764	-	86	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	100	53.597	Scleropages_formosus
ENSPMEG00000006764	-	89	69.868	ENSSFOG00015010267	si:ch1073-335m2.2	100	53.957	Scleropages_formosus
ENSPMEG00000006764	-	100	76.048	ENSSMAG00000008996	-	100	76.048	Scophthalmus_maximus
ENSPMEG00000006764	-	92	70.833	ENSSMAG00000000125	si:ch1073-335m2.2	100	69.058	Scophthalmus_maximus
ENSPMEG00000006764	-	90	91.603	ENSSDUG00000003476	-	96	96.648	Seriola_dumerili
ENSPMEG00000006764	-	90	91.603	ENSSLDG00000012950	-	96	96.648	Seriola_lalandi_dorsalis
ENSPMEG00000006764	-	87	43.058	ENSSPUG00000001866	-	100	43.105	Sphenodon_punctatus
ENSPMEG00000006764	-	97	84.024	ENSSPAG00000012454	si:ch1073-335m2.2	99	84.024	Stegastes_partitus
ENSPMEG00000006764	-	90	93.774	ENSSPAG00000006014	-	90	93.774	Stegastes_partitus
ENSPMEG00000006764	-	91	73.783	ENSSSCG00000034484	SPEN	96	45.227	Sus_scrofa
ENSPMEG00000006764	-	87	61.719	ENSTRUG00000021008	si:ch1073-335m2.2	100	61.719	Takifugu_rubripes
ENSPMEG00000006764	-	88	93.258	ENSTRUG00000024350	-	100	70.658	Takifugu_rubripes
ENSPMEG00000006764	-	98	62.109	ENSTNIG00000014666	si:ch1073-335m2.2	100	62.109	Tetraodon_nigroviridis
ENSPMEG00000006764	-	96	85.206	ENSTNIG00000010907	-	100	85.206	Tetraodon_nigroviridis
ENSPMEG00000006764	-	70	77.181	ENSTBEG00000003628	SPEN	68	77.181	Tupaia_belangeri
ENSPMEG00000006764	-	81	71.130	ENSTTRG00000015704	SPEN	68	74.408	Tursiops_truncatus
ENSPMEG00000006764	-	91	73.783	ENSUAMG00000009600	SPEN	96	45.146	Ursus_americanus
ENSPMEG00000006764	-	83	69.919	ENSUMAG00000021641	SPEN	96	44.021	Ursus_maritimus
ENSPMEG00000006764	-	91	96.429	ENSVVUG00000028951	SPEN	95	96.429	Vulpes_vulpes
ENSPMEG00000006764	-	90	71.970	ENSXETG00000023114	SPEN	100	41.762	Xenopus_tropicalis
ENSPMEG00000006764	-	97	75.897	ENSXCOG00000004516	si:ch1073-335m2.2	99	75.897	Xiphophorus_couchianus
ENSPMEG00000006764	-	97	75.635	ENSXMAG00000029887	si:ch1073-335m2.2	99	75.635	Xiphophorus_maculatus
ENSPMEG00000006764	-	100	96.967	ENSXMAG00000021384	-	100	96.967	Xiphophorus_maculatus