EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000006803 (Gene tree)
Gene ID: 106915075
Gene Symbol: snd1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 174882 bases
Position: chrKQ551129.1:2315-177196
Accession: 106915075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000005379	TUDOR	PF00567.24	4.3e-26	1	1
ENSPMEP00000005379	SNase	PF00565.17	1.5e-67	1	4
ENSPMEP00000005379	SNase	PF00565.17	1.5e-67	2	4
ENSPMEP00000005379	SNase	PF00565.17	1.5e-67	3	4
ENSPMEP00000005379	SNase	PF00565.17	1.5e-67	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000007590	-	5673	XM_014982396	ENSPMEP00000005379	911 (aa)	XP_014837882	UPI00072E4902

Gene Model

Click here to download ENSPMEG00000006803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006803	snd1	99	85.095	ENSG00000197157	SND1	100	84.211	Homo_sapiens
ENSPMEG00000006803	snd1	100	96.378	ENSAPOG00000017599	snd1	100	96.378	Acanthochromis_polyacanthus
ENSPMEG00000006803	snd1	100	84.026	ENSAMEG00000004664	SND1	94	84.026	Ailuropoda_melanoleuca
ENSPMEG00000006803	snd1	100	92.206	ENSACIG00000003551	snd1	100	92.206	Amphilophus_citrinellus
ENSPMEG00000006803	snd1	100	96.158	ENSAOCG00000014166	snd1	100	96.158	Amphiprion_ocellaris
ENSPMEG00000006803	snd1	100	96.158	ENSAPEG00000007067	snd1	100	96.158	Amphiprion_percula
ENSPMEG00000006803	snd1	98	95.414	ENSATEG00000018475	snd1	89	95.414	Anabas_testudineus
ENSPMEG00000006803	snd1	99	84.983	ENSANAG00000034463	SND1	99	85.102	Aotus_nancymaae
ENSPMEG00000006803	snd1	100	94.731	ENSACLG00000022897	snd1	100	94.731	Astatotilapia_calliptera
ENSPMEG00000006803	snd1	99	90.440	ENSAMXG00000016318	snd1	99	90.440	Astyanax_mexicanus
ENSPMEG00000006803	snd1	99	85.206	ENSBTAG00000010692	SND1	100	84.320	Bos_taurus
ENSPMEG00000006803	snd1	99	46.774	WBGene00006626	tsn-1	99	46.882	Caenorhabditis_elegans
ENSPMEG00000006803	snd1	99	84.761	ENSCJAG00000017668	SND1	100	83.882	Callithrix_jacchus
ENSPMEG00000006803	snd1	100	84.320	ENSCAFG00000001700	SND1	100	84.320	Canis_familiaris
ENSPMEG00000006803	snd1	100	84.320	ENSCAFG00020021639	SND1	100	84.320	Canis_lupus_dingo
ENSPMEG00000006803	snd1	99	85.095	ENSCHIG00000023390	SND1	100	84.211	Capra_hircus
ENSPMEG00000006803	snd1	70	88.070	ENSTSYG00000004979	SND1	96	88.070	Carlito_syrichta
ENSPMEG00000006803	snd1	97	74.887	ENSCAPG00000010677	SND1	97	74.247	Cavia_aperea
ENSPMEG00000006803	snd1	99	84.872	ENSCPOG00000006251	SND1	100	83.991	Cavia_porcellus
ENSPMEG00000006803	snd1	99	84.983	ENSCCAG00000036847	SND1	100	84.101	Cebus_capucinus
ENSPMEG00000006803	snd1	99	85.317	ENSCATG00000035214	SND1	99	85.440	Cercocebus_atys
ENSPMEG00000006803	snd1	99	85.095	ENSCLAG00000011796	SND1	98	86.242	Chinchilla_lanigera
ENSPMEG00000006803	snd1	99	85.317	ENSCSAG00000010182	SND1	100	84.430	Chlorocebus_sabaeus
ENSPMEG00000006803	snd1	77	77.228	ENSCHOG00000002218	SND1	85	77.000	Choloepus_hoffmanni
ENSPMEG00000006803	snd1	100	84.303	ENSCPBG00000018094	SND1	100	84.303	Chrysemys_picta_bellii
ENSPMEG00000006803	snd1	98	56.478	ENSCING00000000524	-	99	56.004	Ciona_intestinalis
ENSPMEG00000006803	snd1	99	56.783	ENSCSAVG00000008807	-	99	56.565	Ciona_savignyi
ENSPMEG00000006803	snd1	99	85.317	ENSCANG00000035119	SND1	100	84.430	Colobus_angolensis_palliatus
ENSPMEG00000006803	snd1	99	84.427	ENSCGRG00001022514	Snd1	98	85.906	Cricetulus_griseus_chok1gshd
ENSPMEG00000006803	snd1	97	84.537	ENSCGRG00000012277	Snd1	99	84.537	Cricetulus_griseus_crigri
ENSPMEG00000006803	snd1	100	93.963	ENSCSEG00000008661	snd1	100	93.963	Cynoglossus_semilaevis
ENSPMEG00000006803	snd1	100	97.366	ENSCVAG00000010316	snd1	100	97.366	Cyprinodon_variegatus
ENSPMEG00000006803	snd1	100	89.157	ENSDARG00000006766	snd1	99	90.829	Danio_rerio
ENSPMEG00000006803	snd1	97	83.127	ENSDNOG00000006795	SND1	100	83.127	Dasypus_novemcinctus
ENSPMEG00000006803	snd1	99	84.872	ENSDORG00000000336	Snd1	100	83.991	Dipodomys_ordii
ENSPMEG00000006803	snd1	98	50.163	FBgn0035121	Tudor-SN	99	49.625	Drosophila_melanogaster
ENSPMEG00000006803	snd1	90	88.889	ENSETEG00000000375	SND1	92	88.889	Echinops_telfairi
ENSPMEG00000006803	snd1	60	66.846	ENSEBUG00000014201	-	84	76.630	Eptatretus_burgeri
ENSPMEG00000006803	snd1	99	83.698	ENSEASG00005008513	SND1	100	82.848	Equus_asinus_asinus
ENSPMEG00000006803	snd1	99	84.872	ENSECAG00000011451	SND1	100	83.882	Equus_caballus
ENSPMEG00000006803	snd1	99	75.306	ENSEEUG00000014737	SND1	100	74.561	Erinaceus_europaeus
ENSPMEG00000006803	snd1	99	88.474	ENSELUG00000001805	snd1	96	88.474	Esox_lucius
ENSPMEG00000006803	snd1	100	84.211	ENSFCAG00000008289	SND1	100	84.211	Felis_catus
ENSPMEG00000006803	snd1	98	84.787	ENSFDAG00000015881	SND1	100	83.772	Fukomys_damarensis
ENSPMEG00000006803	snd1	100	95.059	ENSFHEG00000004093	snd1	99	96.701	Fundulus_heteroclitus
ENSPMEG00000006803	snd1	75	83.898	ENSGMOG00000018932	snd1	66	83.898	Gadus_morhua
ENSPMEG00000006803	snd1	100	98.902	ENSGAFG00000008421	snd1	100	98.902	Gambusia_affinis
ENSPMEG00000006803	snd1	100	61.388	ENSGACG00000019793	snd1	100	61.388	Gasterosteus_aculeatus
ENSPMEG00000006803	snd1	99	85.317	ENSGGOG00000009614	SND1	99	85.440	Gorilla_gorilla
ENSPMEG00000006803	snd1	100	94.621	ENSHBUG00000019135	snd1	100	94.621	Haplochromis_burtoni
ENSPMEG00000006803	snd1	99	84.650	ENSHGLG00000003618	SND1	98	86.074	Heterocephalus_glaber_female
ENSPMEG00000006803	snd1	99	84.650	ENSHGLG00100012449	SND1	99	84.650	Heterocephalus_glaber_male
ENSPMEG00000006803	snd1	100	92.316	ENSHCOG00000005266	snd1	100	92.316	Hippocampus_comes
ENSPMEG00000006803	snd1	99	88.474	ENSIPUG00000013279	snd1	99	88.474	Ictalurus_punctatus
ENSPMEG00000006803	snd1	99	84.983	ENSSTOG00000002140	SND1	100	84.101	Ictidomys_tridecemlineatus
ENSPMEG00000006803	snd1	99	84.983	ENSJJAG00000009561	Snd1	100	84.101	Jaculus_jaculus
ENSPMEG00000006803	snd1	100	96.926	ENSKMAG00000016997	snd1	100	96.926	Kryptolebias_marmoratus
ENSPMEG00000006803	snd1	100	93.963	ENSLBEG00000013563	snd1	100	93.963	Labrus_bergylta
ENSPMEG00000006803	snd1	99	88.852	ENSLOCG00000015537	snd1	99	88.017	Lepisosteus_oculatus
ENSPMEG00000006803	snd1	100	84.320	ENSLAFG00000009696	SND1	100	84.320	Loxodonta_africana
ENSPMEG00000006803	snd1	99	85.317	ENSMFAG00000038114	SND1	99	85.440	Macaca_fascicularis
ENSPMEG00000006803	snd1	99	85.317	ENSMMUG00000015432	SND1	100	84.430	Macaca_mulatta
ENSPMEG00000006803	snd1	99	85.317	ENSMNEG00000039808	SND1	100	85.457	Macaca_nemestrina
ENSPMEG00000006803	snd1	99	85.206	ENSMLEG00000029040	SND1	100	85.344	Mandrillus_leucophaeus
ENSPMEG00000006803	snd1	100	94.512	ENSMAMG00000011739	snd1	100	94.512	Mastacembelus_armatus
ENSPMEG00000006803	snd1	100	94.731	ENSMZEG00005005681	snd1	100	94.731	Maylandia_zebra
ENSPMEG00000006803	snd1	99	85.206	ENSMICG00000000097	SND1	100	84.320	Microcebus_murinus
ENSPMEG00000006803	snd1	99	84.983	ENSMOCG00000005040	Snd1	100	84.101	Microtus_ochrogaster
ENSPMEG00000006803	snd1	100	94.621	ENSMMOG00000001795	snd1	100	94.621	Mola_mola
ENSPMEG00000006803	snd1	99	84.316	ENSMODG00000015182	SND1	100	83.443	Monodelphis_domestica
ENSPMEG00000006803	snd1	100	94.841	ENSMALG00000012071	snd1	100	94.841	Monopterus_albus
ENSPMEG00000006803	snd1	98	84.676	MGP_CAROLIEiJ_G0028159	Snd1	99	85.882	Mus_caroli
ENSPMEG00000006803	snd1	98	84.452	ENSMUSG00000001424	Snd1	100	83.443	Mus_musculus
ENSPMEG00000006803	snd1	98	84.676	MGP_PahariEiJ_G0021917	Snd1	100	85.882	Mus_pahari
ENSPMEG00000006803	snd1	98	84.676	MGP_SPRETEiJ_G0029159	Snd1	100	83.662	Mus_spretus
ENSPMEG00000006803	snd1	100	84.211	ENSMPUG00000006545	SND1	100	83.772	Mustela_putorius_furo
ENSPMEG00000006803	snd1	97	84.169	ENSMLUG00000017130	SND1	99	83.501	Myotis_lucifugus
ENSPMEG00000006803	snd1	99	84.872	ENSNGAG00000011186	Snd1	100	83.991	Nannospalax_galili
ENSPMEG00000006803	snd1	100	94.731	ENSNBRG00000006681	snd1	100	94.731	Neolamprologus_brichardi
ENSPMEG00000006803	snd1	100	84.430	ENSNLEG00000012263	SND1	99	86.555	Nomascus_leucogenys
ENSPMEG00000006803	snd1	91	88.889	ENSOPRG00000013405	SND1	92	88.889	Ochotona_princeps
ENSPMEG00000006803	snd1	99	85.095	ENSODEG00000011502	SND1	99	85.095	Octodon_degus
ENSPMEG00000006803	snd1	100	94.621	ENSONIG00000011481	snd1	97	94.621	Oreochromis_niloticus
ENSPMEG00000006803	snd1	98	83.933	ENSOANG00000000817	SND1	99	82.637	Ornithorhynchus_anatinus
ENSPMEG00000006803	snd1	99	83.516	ENSOCUG00000001620	SND1	99	83.516	Oryctolagus_cuniculus
ENSPMEG00000006803	snd1	100	93.963	ENSORLG00000015201	snd1	100	93.963	Oryzias_latipes
ENSPMEG00000006803	snd1	100	94.182	ENSORLG00020013991	snd1	100	94.182	Oryzias_latipes_hni
ENSPMEG00000006803	snd1	100	94.182	ENSORLG00015012436	snd1	100	94.182	Oryzias_latipes_hsok
ENSPMEG00000006803	snd1	100	94.512	ENSOMEG00000006406	snd1	100	94.512	Oryzias_melastigma
ENSPMEG00000006803	snd1	99	85.128	ENSOGAG00000013356	SND1	94	84.245	Otolemur_garnettii
ENSPMEG00000006803	snd1	97	82.864	ENSOARG00000002149	SND1	100	82.864	Ovis_aries
ENSPMEG00000006803	snd1	99	85.206	ENSPPAG00000042947	SND1	99	85.327	Pan_paniscus
ENSPMEG00000006803	snd1	100	84.211	ENSPPRG00000004494	SND1	100	84.211	Panthera_pardus
ENSPMEG00000006803	snd1	100	84.101	ENSPTIG00000014214	SND1	100	84.101	Panthera_tigris_altaica
ENSPMEG00000006803	snd1	99	85.206	ENSPTRG00000023911	SND1	99	85.327	Pan_troglodytes
ENSPMEG00000006803	snd1	97	85.440	ENSPANG00000011997	SND1	99	85.440	Papio_anubis
ENSPMEG00000006803	snd1	99	86.439	ENSPKIG00000023494	snd1	99	85.823	Paramormyrops_kingsleyae
ENSPMEG00000006803	snd1	92	94.019	ENSPMGG00000003629	snd1	100	94.019	Periophthalmus_magnuspinnatus
ENSPMEG00000006803	snd1	99	84.761	ENSPEMG00000010240	Snd1	100	83.882	Peromyscus_maniculatus_bairdii
ENSPMEG00000006803	snd1	97	74.153	ENSPMAG00000007915	-	99	74.041	Petromyzon_marinus
ENSPMEG00000006803	snd1	99	84.872	ENSPCIG00000011561	SND1	100	83.991	Phascolarctos_cinereus
ENSPMEG00000006803	snd1	100	99.561	ENSPFOG00000001557	snd1	100	99.561	Poecilia_formosa
ENSPMEG00000006803	snd1	100	99.561	ENSPLAG00000018459	snd1	97	99.561	Poecilia_latipinna
ENSPMEG00000006803	snd1	100	99.122	ENSPREG00000002189	snd1	100	99.122	Poecilia_reticulata
ENSPMEG00000006803	snd1	91	88.889	ENSPPYG00000017972	SND1	99	88.889	Pongo_abelii
ENSPMEG00000006803	snd1	99	74.861	ENSPCAG00000011305	SND1	100	74.123	Procavia_capensis
ENSPMEG00000006803	snd1	99	85.317	ENSPCOG00000026791	SND1	100	85.457	Propithecus_coquereli
ENSPMEG00000006803	snd1	99	82.870	ENSPVAG00000013945	SND1	100	82.018	Pteropus_vampyrus
ENSPMEG00000006803	snd1	100	94.621	ENSPNYG00000000932	snd1	100	94.621	Pundamilia_nyererei
ENSPMEG00000006803	snd1	99	90.659	ENSPNAG00000001206	snd1	99	90.659	Pygocentrus_nattereri
ENSPMEG00000006803	snd1	98	84.564	ENSRNOG00000031173	Snd1	99	84.427	Rattus_norvegicus
ENSPMEG00000006803	snd1	70	88.764	ENSRBIG00000027782	-	93	88.826	Rhinopithecus_bieti
ENSPMEG00000006803	snd1	99	85.317	ENSRROG00000033020	SND1	100	84.430	Rhinopithecus_roxellana
ENSPMEG00000006803	snd1	99	84.872	ENSSBOG00000032461	SND1	100	83.991	Saimiri_boliviensis_boliviensis
ENSPMEG00000006803	snd1	98	81.461	ENSSHAG00000015359	SND1	100	81.461	Sarcophilus_harrisii
ENSPMEG00000006803	snd1	98	88.248	ENSSFOG00015001103	snd1	99	87.364	Scleropages_formosus
ENSPMEG00000006803	snd1	100	94.402	ENSSMAG00000001932	snd1	95	94.402	Scophthalmus_maximus
ENSPMEG00000006803	snd1	100	96.048	ENSSDUG00000002699	snd1	94	96.048	Seriola_dumerili
ENSPMEG00000006803	snd1	100	88.364	ENSSLDG00000001950	snd1	100	88.364	Seriola_lalandi_dorsalis
ENSPMEG00000006803	snd1	86	80.854	ENSSARG00000004877	SND1	92	80.854	Sorex_araneus
ENSPMEG00000006803	snd1	71	80.442	ENSSPUG00000017586	SND1	97	80.442	Sphenodon_punctatus
ENSPMEG00000006803	snd1	73	95.093	ENSSPAG00000021398	snd1	99	95.093	Stegastes_partitus
ENSPMEG00000006803	snd1	99	84.761	ENSSSCG00000016590	SND1	100	83.882	Sus_scrofa
ENSPMEG00000006803	snd1	100	93.456	ENSTRUG00000014067	snd1	100	92.536	Takifugu_rubripes
ENSPMEG00000006803	snd1	100	93.304	ENSTNIG00000011019	snd1	100	93.304	Tetraodon_nigroviridis
ENSPMEG00000006803	snd1	93	79.412	ENSTBEG00000003999	SND1	100	79.412	Tupaia_belangeri
ENSPMEG00000006803	snd1	99	80.645	ENSTTRG00000006059	SND1	100	79.825	Tursiops_truncatus
ENSPMEG00000006803	snd1	87	83.650	ENSUAMG00000005604	-	93	83.650	Ursus_americanus
ENSPMEG00000006803	snd1	67	77.807	ENSUAMG00000002820	-	89	77.807	Ursus_americanus
ENSPMEG00000006803	snd1	100	84.101	ENSUMAG00000005960	SND1	100	84.101	Ursus_maritimus
ENSPMEG00000006803	snd1	77	88.889	ENSVPAG00000008302	SND1	74	88.889	Vicugna_pacos
ENSPMEG00000006803	snd1	100	84.211	ENSVVUG00000007226	SND1	100	84.211	Vulpes_vulpes
ENSPMEG00000006803	snd1	97	79.820	ENSXETG00000023043	snd1	100	79.680	Xenopus_tropicalis
ENSPMEG00000006803	snd1	92	95.724	ENSXCOG00000013629	snd1	99	95.724	Xiphophorus_couchianus
ENSPMEG00000006803	snd1	100	99.012	ENSXMAG00000011469	snd1	100	99.012	Xiphophorus_maculatus