EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000006813 (Gene tree)
Gene ID: 106910515
Gene Symbol: prpf4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 15737 bases
Position: chrKQ554510.1:45321-61057
Accession: 106910515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000005449	PRP4	PF08799.11	1.5e-14	1	1
ENSPMEP00000024492	PRP4	PF08799.11	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000007489	-	1126	-	ENSPMEP00000005449	339 (aa)	-	UPI00072EB208
ENSPMET00000007494	-	1070	XM_014977166	ENSPMEP00000024492	339 (aa)	XP_014832652	UPI00072EB208

Gene Model

Click here to download ENSPMEG00000006813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006813	prpf4	98	74.398	ENSG00000136875	PRPF4	92	74.398	Homo_sapiens
ENSPMEG00000006813	prpf4	100	88.791	ENSAPOG00000014132	prpf4	98	88.791	Acanthochromis_polyacanthus
ENSPMEG00000006813	prpf4	98	74.096	ENSAMEG00000013048	PRPF4	89	74.096	Ailuropoda_melanoleuca
ENSPMEG00000006813	prpf4	100	88.496	ENSACIG00000005579	prpf4	98	88.496	Amphilophus_citrinellus
ENSPMEG00000006813	prpf4	100	89.676	ENSAOCG00000005457	prpf4	99	89.676	Amphiprion_ocellaris
ENSPMEG00000006813	prpf4	100	89.381	ENSAPEG00000000776	prpf4	98	89.381	Amphiprion_percula
ENSPMEG00000006813	prpf4	100	89.086	ENSATEG00000023013	prpf4	98	89.086	Anabas_testudineus
ENSPMEG00000006813	prpf4	99	73.512	ENSAPLG00000006534	PRPF4	92	73.512	Anas_platyrhynchos
ENSPMEG00000006813	prpf4	99	70.882	ENSACAG00000015110	PRPF4	95	70.882	Anolis_carolinensis
ENSPMEG00000006813	prpf4	98	74.096	ENSANAG00000022464	PRPF4	88	74.096	Aotus_nancymaae
ENSPMEG00000006813	prpf4	100	90.265	ENSACLG00000019031	prpf4	98	90.265	Astatotilapia_calliptera
ENSPMEG00000006813	prpf4	99	76.292	ENSAMXG00000006756	prpf4	93	76.292	Astyanax_mexicanus
ENSPMEG00000006813	prpf4	98	74.096	ENSBTAG00000004571	PRPF4	92	74.096	Bos_taurus
ENSPMEG00000006813	prpf4	83	42.254	WBGene00007972	prp-4	74	42.254	Caenorhabditis_elegans
ENSPMEG00000006813	prpf4	98	74.096	ENSCJAG00000017856	PRPF4	91	74.096	Callithrix_jacchus
ENSPMEG00000006813	prpf4	98	74.096	ENSCAFG00000003224	PRPF4	89	74.096	Canis_familiaris
ENSPMEG00000006813	prpf4	98	74.096	ENSCAFG00020022637	PRPF4	92	74.096	Canis_lupus_dingo
ENSPMEG00000006813	prpf4	98	74.096	ENSCHIG00000024648	-	91	74.096	Capra_hircus
ENSPMEG00000006813	prpf4	98	74.096	ENSTSYG00000010366	PRPF4	92	74.096	Carlito_syrichta
ENSPMEG00000006813	prpf4	86	67.241	ENSCAPG00000008935	PRPF4	67	67.241	Cavia_aperea
ENSPMEG00000006813	prpf4	98	74.096	ENSCPOG00000010747	-	92	74.096	Cavia_porcellus
ENSPMEG00000006813	prpf4	98	70.482	ENSCPOG00000014729	-	94	70.482	Cavia_porcellus
ENSPMEG00000006813	prpf4	98	73.795	ENSCCAG00000028990	PRPF4	92	73.795	Cebus_capucinus
ENSPMEG00000006813	prpf4	98	74.096	ENSCATG00000021552	PRPF4	92	74.096	Cercocebus_atys
ENSPMEG00000006813	prpf4	98	74.096	ENSCLAG00000013448	PRPF4	92	74.096	Chinchilla_lanigera
ENSPMEG00000006813	prpf4	83	74.021	ENSCHOG00000007233	PRPF4	95	74.021	Choloepus_hoffmanni
ENSPMEG00000006813	prpf4	99	72.321	ENSCPBG00000019136	PRPF4	71	72.321	Chrysemys_picta_bellii
ENSPMEG00000006813	prpf4	95	56.881	ENSCING00000001299	-	82	56.881	Ciona_intestinalis
ENSPMEG00000006813	prpf4	99	54.142	ENSCSAVG00000009178	-	99	56.357	Ciona_savignyi
ENSPMEG00000006813	prpf4	98	74.096	ENSCANG00000003246	PRPF4	92	74.096	Colobus_angolensis_palliatus
ENSPMEG00000006813	prpf4	98	74.096	ENSCGRG00001016992	Prpf4	92	74.096	Cricetulus_griseus_chok1gshd
ENSPMEG00000006813	prpf4	98	74.096	ENSCGRG00000017560	Prpf4	92	74.096	Cricetulus_griseus_crigri
ENSPMEG00000006813	prpf4	100	81.711	ENSCSEG00000020451	prpf4	99	81.711	Cynoglossus_semilaevis
ENSPMEG00000006813	prpf4	100	77.286	ENSDARG00000067639	prpf4	98	77.286	Danio_rerio
ENSPMEG00000006813	prpf4	98	74.096	ENSDNOG00000013203	PRPF4	91	74.096	Dasypus_novemcinctus
ENSPMEG00000006813	prpf4	98	74.398	ENSDORG00000026275	Prpf4	92	74.398	Dipodomys_ordii
ENSPMEG00000006813	prpf4	100	45.337	FBgn0036733	U4-U6-60K	98	45.953	Drosophila_melanogaster
ENSPMEG00000006813	prpf4	98	74.096	ENSETEG00000020389	PRPF4	91	74.096	Echinops_telfairi
ENSPMEG00000006813	prpf4	99	65.680	ENSEBUG00000015229	prpf4	67	66.568	Eptatretus_burgeri
ENSPMEG00000006813	prpf4	98	74.096	ENSEASG00005022678	PRPF4	92	74.096	Equus_asinus_asinus
ENSPMEG00000006813	prpf4	98	74.096	ENSECAG00000007072	PRPF4	92	74.096	Equus_caballus
ENSPMEG00000006813	prpf4	76	81.061	ENSEEUG00000007480	PRPF4	72	53.916	Erinaceus_europaeus
ENSPMEG00000006813	prpf4	100	75.811	ENSELUG00000007510	prpf4	98	75.811	Esox_lucius
ENSPMEG00000006813	prpf4	98	74.096	ENSFCAG00000005514	PRPF4	91	74.096	Felis_catus
ENSPMEG00000006813	prpf4	99	72.619	ENSFALG00000005423	PRPF4	65	72.619	Ficedula_albicollis
ENSPMEG00000006813	prpf4	98	74.096	ENSFDAG00000005839	PRPF4	92	74.096	Fukomys_damarensis
ENSPMEG00000006813	prpf4	100	89.381	ENSFHEG00000001300	prpf4	99	89.381	Fundulus_heteroclitus
ENSPMEG00000006813	prpf4	99	73.214	ENSGALG00000008857	PRPF4	92	73.214	Gallus_gallus
ENSPMEG00000006813	prpf4	97	98.176	ENSGAFG00000012164	prpf4	68	98.176	Gambusia_affinis
ENSPMEG00000006813	prpf4	100	73.977	ENSGACG00000015476	prpf4	98	73.684	Gasterosteus_aculeatus
ENSPMEG00000006813	prpf4	99	72.619	ENSGAGG00000025029	PRPF4	91	72.619	Gopherus_agassizii
ENSPMEG00000006813	prpf4	98	74.398	ENSGGOG00000006943	PRPF4	92	74.398	Gorilla_gorilla
ENSPMEG00000006813	prpf4	100	90.265	ENSHBUG00000000562	prpf4	98	90.265	Haplochromis_burtoni
ENSPMEG00000006813	prpf4	98	61.145	ENSHGLG00000003838	-	62	61.145	Heterocephalus_glaber_female
ENSPMEG00000006813	prpf4	93	66.352	ENSHGLG00000016628	-	65	66.981	Heterocephalus_glaber_female
ENSPMEG00000006813	prpf4	98	74.398	ENSHGLG00000015191	PRPF4	92	74.398	Heterocephalus_glaber_female
ENSPMEG00000006813	prpf4	98	61.145	ENSHGLG00100005571	-	62	61.145	Heterocephalus_glaber_male
ENSPMEG00000006813	prpf4	100	74.631	ENSIPUG00000017956	PRPF4	98	74.631	Ictalurus_punctatus
ENSPMEG00000006813	prpf4	98	74.699	ENSSTOG00000027833	PRPF4	92	74.699	Ictidomys_tridecemlineatus
ENSPMEG00000006813	prpf4	98	74.096	ENSJJAG00000008838	Prpf4	92	74.096	Jaculus_jaculus
ENSPMEG00000006813	prpf4	100	88.496	ENSKMAG00000013236	prpf4	98	88.496	Kryptolebias_marmoratus
ENSPMEG00000006813	prpf4	100	88.201	ENSLBEG00000020611	prpf4	98	88.201	Labrus_bergylta
ENSPMEG00000006813	prpf4	100	66.569	ENSLACG00000016317	PRPF4	95	66.569	Latimeria_chalumnae
ENSPMEG00000006813	prpf4	100	77.876	ENSLOCG00000000581	prpf4	98	77.876	Lepisosteus_oculatus
ENSPMEG00000006813	prpf4	98	74.096	ENSLAFG00000018225	PRPF4	91	74.096	Loxodonta_africana
ENSPMEG00000006813	prpf4	98	74.096	ENSMFAG00000039397	PRPF4	92	74.096	Macaca_fascicularis
ENSPMEG00000006813	prpf4	98	74.096	ENSMMUG00000005844	PRPF4	92	74.096	Macaca_mulatta
ENSPMEG00000006813	prpf4	98	61.747	ENSMNEG00000033737	PRPF4	91	61.747	Macaca_nemestrina
ENSPMEG00000006813	prpf4	98	74.096	ENSMLEG00000040284	PRPF4	92	74.096	Mandrillus_leucophaeus
ENSPMEG00000006813	prpf4	100	87.021	ENSMAMG00000020141	prpf4	98	87.021	Mastacembelus_armatus
ENSPMEG00000006813	prpf4	100	90.265	ENSMZEG00005023205	prpf4	98	90.265	Maylandia_zebra
ENSPMEG00000006813	prpf4	99	72.321	ENSMGAG00000001796	PRPF4	92	72.321	Meleagris_gallopavo
ENSPMEG00000006813	prpf4	98	74.096	ENSMAUG00000018022	Prpf4	92	74.096	Mesocricetus_auratus
ENSPMEG00000006813	prpf4	98	74.096	ENSMICG00000015022	PRPF4	91	74.096	Microcebus_murinus
ENSPMEG00000006813	prpf4	98	74.096	ENSMOCG00000018273	Prpf4	92	74.096	Microtus_ochrogaster
ENSPMEG00000006813	prpf4	100	85.841	ENSMMOG00000021177	prpf4	99	85.841	Mola_mola
ENSPMEG00000006813	prpf4	99	72.321	ENSMODG00000004444	-	92	72.321	Monodelphis_domestica
ENSPMEG00000006813	prpf4	99	71.429	ENSMODG00000025096	-	89	71.429	Monodelphis_domestica
ENSPMEG00000006813	prpf4	100	88.496	ENSMALG00000013624	prpf4	98	88.496	Monopterus_albus
ENSPMEG00000006813	prpf4	98	74.096	MGP_CAROLIEiJ_G0026078	Prpf4	92	74.096	Mus_caroli
ENSPMEG00000006813	prpf4	98	74.096	ENSMUSG00000066148	Prpf4	92	74.096	Mus_musculus
ENSPMEG00000006813	prpf4	98	74.398	MGP_PahariEiJ_G0028413	Prpf4	92	74.398	Mus_pahari
ENSPMEG00000006813	prpf4	98	74.096	MGP_SPRETEiJ_G0027042	Prpf4	92	74.096	Mus_spretus
ENSPMEG00000006813	prpf4	98	74.096	ENSMPUG00000007883	PRPF4	92	74.096	Mustela_putorius_furo
ENSPMEG00000006813	prpf4	98	73.795	ENSMLUG00000015309	-	89	73.795	Myotis_lucifugus
ENSPMEG00000006813	prpf4	98	73.193	ENSMLUG00000008626	-	89	73.193	Myotis_lucifugus
ENSPMEG00000006813	prpf4	98	65.407	ENSNGAG00000000468	Prpf4	95	65.407	Nannospalax_galili
ENSPMEG00000006813	prpf4	100	90.265	ENSNBRG00000007972	prpf4	98	90.265	Neolamprologus_brichardi
ENSPMEG00000006813	prpf4	98	74.096	ENSNLEG00000016647	PRPF4	92	74.096	Nomascus_leucogenys
ENSPMEG00000006813	prpf4	99	72.321	ENSMEUG00000013256	PRPF4	94	72.321	Notamacropus_eugenii
ENSPMEG00000006813	prpf4	98	74.096	ENSOPRG00000005302	PRPF4	91	74.096	Ochotona_princeps
ENSPMEG00000006813	prpf4	98	74.096	ENSODEG00000018147	PRPF4	92	74.096	Octodon_degus
ENSPMEG00000006813	prpf4	100	90.560	ENSONIG00000012671	prpf4	98	90.560	Oreochromis_niloticus
ENSPMEG00000006813	prpf4	98	74.398	ENSOCUG00000005046	PRPF4	92	74.398	Oryctolagus_cuniculus
ENSPMEG00000006813	prpf4	100	84.661	ENSORLG00000019641	prpf4	98	84.661	Oryzias_latipes
ENSPMEG00000006813	prpf4	100	84.661	ENSORLG00020019438	prpf4	98	84.661	Oryzias_latipes_hni
ENSPMEG00000006813	prpf4	100	85.841	ENSOMEG00000020941	prpf4	98	85.841	Oryzias_melastigma
ENSPMEG00000006813	prpf4	98	68.373	ENSOGAG00000007802	PRPF4	89	68.373	Otolemur_garnettii
ENSPMEG00000006813	prpf4	98	74.096	ENSOARG00000006319	PRPF4	88	74.096	Ovis_aries
ENSPMEG00000006813	prpf4	98	74.398	ENSPPAG00000041797	PRPF4	92	74.398	Pan_paniscus
ENSPMEG00000006813	prpf4	98	74.096	ENSPPRG00000014360	PRPF4	92	74.096	Panthera_pardus
ENSPMEG00000006813	prpf4	98	74.096	ENSPTIG00000009574	PRPF4	92	74.096	Panthera_tigris_altaica
ENSPMEG00000006813	prpf4	98	74.398	ENSPTRG00000021274	PRPF4	91	74.398	Pan_troglodytes
ENSPMEG00000006813	prpf4	98	74.096	ENSPANG00000025776	PRPF4	88	74.096	Papio_anubis
ENSPMEG00000006813	prpf4	100	78.466	ENSPKIG00000017259	prpf4	98	78.466	Paramormyrops_kingsleyae
ENSPMEG00000006813	prpf4	99	73.214	ENSPSIG00000010713	PRPF4	87	73.214	Pelodiscus_sinensis
ENSPMEG00000006813	prpf4	99	64.438	ENSPMGG00000000997	prpf4	86	65.957	Periophthalmus_magnuspinnatus
ENSPMEG00000006813	prpf4	98	74.096	ENSPEMG00000024115	Prpf4	92	74.096	Peromyscus_maniculatus_bairdii
ENSPMEG00000006813	prpf4	99	72.024	ENSPCIG00000003821	PRPF4	93	72.024	Phascolarctos_cinereus
ENSPMEG00000006813	prpf4	99	97.612	ENSPFOG00000013524	prpf4	99	99.392	Poecilia_formosa
ENSPMEG00000006813	prpf4	96	97.231	ENSPLAG00000011620	prpf4	97	97.214	Poecilia_latipinna
ENSPMEG00000006813	prpf4	98	74.398	ENSPCAG00000002561	PRPF4	93	74.398	Procavia_capensis
ENSPMEG00000006813	prpf4	98	74.398	ENSPCOG00000011975	PRPF4	92	74.398	Propithecus_coquereli
ENSPMEG00000006813	prpf4	98	69.277	ENSPVAG00000004708	PRPF4	91	69.277	Pteropus_vampyrus
ENSPMEG00000006813	prpf4	100	90.560	ENSPNYG00000008013	prpf4	98	90.560	Pundamilia_nyererei
ENSPMEG00000006813	prpf4	100	74.926	ENSPNAG00000000697	prpf4	98	74.926	Pygocentrus_nattereri
ENSPMEG00000006813	prpf4	98	74.096	ENSRNOG00000014777	Prpf4	92	74.096	Rattus_norvegicus
ENSPMEG00000006813	prpf4	98	74.096	ENSRBIG00000040221	PRPF4	92	74.096	Rhinopithecus_bieti
ENSPMEG00000006813	prpf4	98	74.096	ENSRROG00000040240	PRPF4	92	74.096	Rhinopithecus_roxellana
ENSPMEG00000006813	prpf4	99	72.024	ENSSHAG00000017658	PRPF4	92	72.024	Sarcophilus_harrisii
ENSPMEG00000006813	prpf4	100	78.171	ENSSFOG00015008963	prpf4	98	78.171	Scleropages_formosus
ENSPMEG00000006813	prpf4	100	87.316	ENSSMAG00000008889	prpf4	98	87.316	Scophthalmus_maximus
ENSPMEG00000006813	prpf4	100	89.381	ENSSDUG00000022083	prpf4	92	89.381	Seriola_dumerili
ENSPMEG00000006813	prpf4	100	89.086	ENSSLDG00000008115	prpf4	92	89.086	Seriola_lalandi_dorsalis
ENSPMEG00000006813	prpf4	99	73.373	ENSSPUG00000015582	PRPF4	95	73.373	Sphenodon_punctatus
ENSPMEG00000006813	prpf4	100	80.531	ENSSPAG00000011286	prpf4	97	80.531	Stegastes_partitus
ENSPMEG00000006813	prpf4	98	74.096	ENSSSCG00000024648	PRPF4	92	74.096	Sus_scrofa
ENSPMEG00000006813	prpf4	96	74.383	ENSTGUG00000002623	PRPF4	98	74.688	Taeniopygia_guttata
ENSPMEG00000006813	prpf4	100	84.071	ENSTRUG00000008853	prpf4	98	84.071	Takifugu_rubripes
ENSPMEG00000006813	prpf4	100	83.776	ENSTNIG00000013250	prpf4	99	83.776	Tetraodon_nigroviridis
ENSPMEG00000006813	prpf4	98	62.952	ENSTBEG00000000821	PRPF4	91	62.952	Tupaia_belangeri
ENSPMEG00000006813	prpf4	83	76.868	ENSTTRG00000003246	PRPF4	62	76.868	Tursiops_truncatus
ENSPMEG00000006813	prpf4	93	71.835	ENSUAMG00000018288	PRPF4	88	72.492	Ursus_americanus
ENSPMEG00000006813	prpf4	98	73.193	ENSUMAG00000019375	PRPF4	92	73.193	Ursus_maritimus
ENSPMEG00000006813	prpf4	98	73.795	ENSVPAG00000005281	PRPF4	91	73.795	Vicugna_pacos
ENSPMEG00000006813	prpf4	98	72.917	ENSVVUG00000002476	PRPF4	95	72.917	Vulpes_vulpes
ENSPMEG00000006813	prpf4	69	83.475	ENSXCOG00000006101	prpf4	60	83.475	Xiphophorus_couchianus
ENSPMEG00000006813	prpf4	100	97.050	ENSXMAG00000002750	prpf4	99	97.050	Xiphophorus_maculatus