EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000006877 (Gene tree)
Gene ID: 106919742
Gene Symbol: shrprbck1r
Alias: -
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 9064 bases
Position: chrKQ551360.1:52974-62037
Accession: 106919742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000005490	zf-RanBP	PF00641.18	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000007428	-	2109	XM_014990296	ENSPMEP00000005490	702 (aa)	XP_014845782	-

Gene Model

Click here to download ENSPMEG00000006877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000006877	shrprbck1r	51	50.000	ENSPMEG00000023030	sharpin	89	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006877	shrprbck1r	100	81.268	ENSAPOG00000022737	shrprbck1r	100	81.268	Acanthochromis_polyacanthus
ENSPMEG00000006877	shrprbck1r	59	56.845	ENSAPOG00000023352	sharpin	95	56.845	Acanthochromis_polyacanthus
ENSPMEG00000006877	shrprbck1r	100	78.481	ENSACIG00000002184	shrprbck1r	100	78.481	Amphilophus_citrinellus
ENSPMEG00000006877	shrprbck1r	100	81.882	ENSAOCG00000002890	shrprbck1r	100	81.882	Amphiprion_ocellaris
ENSPMEG00000006877	shrprbck1r	59	56.481	ENSAOCG00000017464	sharpin	95	56.481	Amphiprion_ocellaris
ENSPMEG00000006877	shrprbck1r	100	81.690	ENSAPEG00000023274	shrprbck1r	100	81.690	Amphiprion_percula
ENSPMEG00000006877	shrprbck1r	59	56.481	ENSAPEG00000004049	sharpin	95	56.481	Amphiprion_percula
ENSPMEG00000006877	shrprbck1r	59	56.744	ENSATEG00000007832	sharpin	88	56.744	Anabas_testudineus
ENSPMEG00000006877	shrprbck1r	100	79.349	ENSATEG00000014561	shrprbck1r	100	79.632	Anabas_testudineus
ENSPMEG00000006877	shrprbck1r	100	77.119	ENSACLG00000022609	shrprbck1r	100	77.825	Astatotilapia_calliptera
ENSPMEG00000006877	shrprbck1r	100	68.349	ENSAMXG00000021016	shrprbck1r	100	68.587	Astyanax_mexicanus
ENSPMEG00000006877	shrprbck1r	54	56.283	ENSAMXG00000006229	sharpin	97	56.283	Astyanax_mexicanus
ENSPMEG00000006877	shrprbck1r	100	72.638	ENSCSEG00000011306	shrprbck1r	100	72.920	Cynoglossus_semilaevis
ENSPMEG00000006877	shrprbck1r	59	54.253	ENSCVAG00000006586	sharpin	95	54.253	Cyprinodon_variegatus
ENSPMEG00000006877	shrprbck1r	100	88.575	ENSCVAG00000007250	shrprbck1r	100	88.575	Cyprinodon_variegatus
ENSPMEG00000006877	shrprbck1r	100	67.961	ENSDARG00000059871	shrprbck1r	100	68.100	Danio_rerio
ENSPMEG00000006877	shrprbck1r	54	54.359	ENSDARG00000076995	sharpin	94	54.359	Danio_rerio
ENSPMEG00000006877	shrprbck1r	100	71.469	ENSELUG00000016022	shrprbck1r	100	71.469	Esox_lucius
ENSPMEG00000006877	shrprbck1r	59	54.023	ENSFHEG00000013564	sharpin	94	54.023	Fundulus_heteroclitus
ENSPMEG00000006877	shrprbck1r	100	93.475	ENSGAFG00000009309	shrprbck1r	100	93.475	Gambusia_affinis
ENSPMEG00000006877	shrprbck1r	59	43.091	ENSGAFG00000021405	sharpin	95	43.091	Gambusia_affinis
ENSPMEG00000006877	shrprbck1r	75	78.748	ENSGACG00000002544	shrprbck1r	99	78.748	Gasterosteus_aculeatus
ENSPMEG00000006877	shrprbck1r	100	77.778	ENSHBUG00000021933	shrprbck1r	100	77.918	Haplochromis_burtoni
ENSPMEG00000006877	shrprbck1r	60	52.804	ENSHCOG00000018847	sharpin	81	53.271	Hippocampus_comes
ENSPMEG00000006877	shrprbck1r	54	55.844	ENSIPUG00000011951	sharpin	99	55.844	Ictalurus_punctatus
ENSPMEG00000006877	shrprbck1r	96	66.618	ENSIPUG00000014247	shrprbck1r	98	65.272	Ictalurus_punctatus
ENSPMEG00000006877	shrprbck1r	100	78.581	ENSKMAG00000015215	shrprbck1r	100	78.581	Kryptolebias_marmoratus
ENSPMEG00000006877	shrprbck1r	59	55.478	ENSKMAG00000015204	sharpin	76	55.478	Kryptolebias_marmoratus
ENSPMEG00000006877	shrprbck1r	100	78.352	ENSLBEG00000016876	shrprbck1r	100	78.911	Labrus_bergylta
ENSPMEG00000006877	shrprbck1r	59	56.351	ENSLBEG00000016624	sharpin	96	56.351	Labrus_bergylta
ENSPMEG00000006877	shrprbck1r	95	53.207	ENSLACG00000010948	-	97	53.207	Latimeria_chalumnae
ENSPMEG00000006877	shrprbck1r	100	66.620	ENSLOCG00000008910	shrprbck1r	100	67.083	Lepisosteus_oculatus
ENSPMEG00000006877	shrprbck1r	55	55.102	ENSMAMG00000014645	sharpin	95	55.102	Mastacembelus_armatus
ENSPMEG00000006877	shrprbck1r	100	77.401	ENSMAMG00000022930	shrprbck1r	100	77.542	Mastacembelus_armatus
ENSPMEG00000006877	shrprbck1r	100	76.934	ENSMZEG00005021257	shrprbck1r	100	77.637	Maylandia_zebra
ENSPMEG00000006877	shrprbck1r	100	76.190	ENSMMOG00000003764	shrprbck1r	100	76.190	Mola_mola
ENSPMEG00000006877	shrprbck1r	96	78.940	ENSMALG00000008861	shrprbck1r	96	78.426	Monopterus_albus
ENSPMEG00000006877	shrprbck1r	55	55.102	ENSMALG00000020528	sharpin	96	55.102	Monopterus_albus
ENSPMEG00000006877	shrprbck1r	100	77.778	ENSNBRG00000002270	shrprbck1r	100	78.481	Neolamprologus_brichardi
ENSPMEG00000006877	shrprbck1r	54	54.568	ENSONIG00000009626	-	97	54.568	Oreochromis_niloticus
ENSPMEG00000006877	shrprbck1r	100	77.356	ENSONIG00000014401	shrprbck1r	100	78.059	Oreochromis_niloticus
ENSPMEG00000006877	shrprbck1r	100	77.433	ENSORLG00000007392	shrprbck1r	100	77.433	Oryzias_latipes
ENSPMEG00000006877	shrprbck1r	59	54.907	ENSORLG00000017281	sharpin	95	54.907	Oryzias_latipes
ENSPMEG00000006877	shrprbck1r	100	76.545	ENSORLG00020018619	shrprbck1r	100	76.545	Oryzias_latipes_hni
ENSPMEG00000006877	shrprbck1r	59	54.861	ENSORLG00020000801	sharpin	95	54.861	Oryzias_latipes_hni
ENSPMEG00000006877	shrprbck1r	59	54.861	ENSORLG00015009860	sharpin	95	54.861	Oryzias_latipes_hsok
ENSPMEG00000006877	shrprbck1r	100	76.587	ENSORLG00015018865	shrprbck1r	100	76.587	Oryzias_latipes_hsok
ENSPMEG00000006877	shrprbck1r	52	57.778	ENSOMEG00000005729	sharpin	89	57.778	Oryzias_melastigma
ENSPMEG00000006877	shrprbck1r	100	78.622	ENSOMEG00000012749	shrprbck1r	100	78.622	Oryzias_melastigma
ENSPMEG00000006877	shrprbck1r	100	69.930	ENSPKIG00000006933	shrprbck1r	100	69.930	Paramormyrops_kingsleyae
ENSPMEG00000006877	shrprbck1r	65	58.422	ENSPKIG00000018308	-	95	58.422	Paramormyrops_kingsleyae
ENSPMEG00000006877	shrprbck1r	100	73.759	ENSPMGG00000013254	shrprbck1r	100	73.759	Periophthalmus_magnuspinnatus
ENSPMEG00000006877	shrprbck1r	59	53.846	ENSPFOG00000015253	sharpin	95	53.089	Poecilia_formosa
ENSPMEG00000006877	shrprbck1r	100	96.312	ENSPFOG00000004214	shrprbck1r	100	96.312	Poecilia_formosa
ENSPMEG00000006877	shrprbck1r	59	53.318	ENSPLAG00000000423	sharpin	95	53.318	Poecilia_latipinna
ENSPMEG00000006877	shrprbck1r	100	95.603	ENSPLAG00000020523	shrprbck1r	100	95.603	Poecilia_latipinna
ENSPMEG00000006877	shrprbck1r	59	53.196	ENSPREG00000009702	sharpin	95	53.196	Poecilia_reticulata
ENSPMEG00000006877	shrprbck1r	100	94.444	ENSPREG00000014689	shrprbck1r	100	94.444	Poecilia_reticulata
ENSPMEG00000006877	shrprbck1r	100	77.356	ENSPNYG00000022601	shrprbck1r	100	78.059	Pundamilia_nyererei
ENSPMEG00000006877	shrprbck1r	100	67.080	ENSPNAG00000007847	shrprbck1r	100	67.531	Pygocentrus_nattereri
ENSPMEG00000006877	shrprbck1r	54	54.856	ENSPNAG00000002911	sharpin	99	54.974	Pygocentrus_nattereri
ENSPMEG00000006877	shrprbck1r	63	52.469	ENSSFOG00015004028	sharpin	99	53.131	Scleropages_formosus
ENSPMEG00000006877	shrprbck1r	77	62.177	ENSSFOG00015014150	-	99	62.177	Scleropages_formosus
ENSPMEG00000006877	shrprbck1r	100	77.298	ENSSMAG00000018085	shrprbck1r	100	77.577	Scophthalmus_maximus
ENSPMEG00000006877	shrprbck1r	60	45.283	ENSSDUG00000019039	sharpin	96	45.283	Seriola_dumerili
ENSPMEG00000006877	shrprbck1r	100	80.818	ENSSDUG00000002959	shrprbck1r	100	81.100	Seriola_dumerili
ENSPMEG00000006877	shrprbck1r	100	80.677	ENSSLDG00000009026	shrprbck1r	100	80.959	Seriola_lalandi_dorsalis
ENSPMEG00000006877	shrprbck1r	96	79.883	ENSSPAG00000016097	shrprbck1r	99	79.883	Stegastes_partitus
ENSPMEG00000006877	shrprbck1r	59	52.370	ENSTRUG00000011046	sharpin	96	53.302	Takifugu_rubripes
ENSPMEG00000006877	shrprbck1r	100	75.176	ENSTRUG00000006949	shrprbck1r	100	75.882	Takifugu_rubripes
ENSPMEG00000006877	shrprbck1r	54	54.156	ENSTNIG00000008521	sharpin	94	54.156	Tetraodon_nigroviridis
ENSPMEG00000006877	shrprbck1r	59	42.243	ENSXCOG00000015019	sharpin	96	42.243	Xiphophorus_couchianus
ENSPMEG00000006877	shrprbck1r	100	93.314	ENSXCOG00000006701	shrprbck1r	100	93.314	Xiphophorus_couchianus
ENSPMEG00000006877	shrprbck1r	100	93.030	ENSXMAG00000018972	shrprbck1r	100	93.030	Xiphophorus_maculatus
ENSPMEG00000006877	shrprbck1r	59	53.318	ENSXMAG00000022076	sharpin	95	53.318	Xiphophorus_maculatus