EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000006928 (Gene tree)
Gene ID: 106905195
Gene Symbol: zc3h13
Alias: -
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 16753 bases
Position: chrKQ551056.1:228330-245082
Accession: 106905195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000024520	zf-CCCH	PF00642.24	3.4e-06	1	1
ENSPMEP00000024544	zf-CCCH	PF00642.24	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000007413	-	5004	-	ENSPMEP00000024520	1667 (aa)	-	-
ENSPMET00000007374	-	6920	XM_014969867	ENSPMEP00000024544	1805 (aa)	XP_014825353	UPI00072E1013

Gene Model

Click here to download ENSPMEG00000006928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000006928's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000006928	zc3h13	76	81.841	ENSACIG00000001200	zc3h13	69	82.090	Amphilophus_citrinellus
ENSPMEG00000006928	zc3h13	51	77.568	ENSATEG00000003937	zc3h13	72	81.446	Anabas_testudineus
ENSPMEG00000006928	zc3h13	67	67.713	ENSAPLG00000002707	ZC3H13	62	61.753	Anas_platyrhynchos
ENSPMEG00000006928	zc3h13	51	54.316	ENSDARG00000037177	zc3h13	71	70.936	Danio_rerio
ENSPMEG00000006928	zc3h13	90	69.242	ENSGACG00000015166	zc3h13	76	75.421	Gasterosteus_aculeatus
ENSPMEG00000006928	zc3h13	90	72.959	ENSKMAG00000010701	zc3h13	100	74.204	Kryptolebias_marmoratus
ENSPMEG00000006928	zc3h13	53	63.786	ENSLACG00000003806	ZC3H13	54	63.786	Latimeria_chalumnae
ENSPMEG00000006928	zc3h13	51	70.023	ENSONIG00000012236	zc3h13	72	83.088	Oreochromis_niloticus
ENSPMEG00000006928	zc3h13	51	73.769	ENSORLG00000005201	zc3h13	73	77.751	Oryzias_latipes
ENSPMEG00000006928	zc3h13	51	73.134	ENSORLG00020016576	zc3h13	73	77.751	Oryzias_latipes_hni
ENSPMEG00000006928	zc3h13	51	73.968	ENSORLG00015014966	zc3h13	73	77.506	Oryzias_latipes_hsok
ENSPMEG00000006928	zc3h13	51	72.468	ENSOMEG00000007044	zc3h13	72	78.922	Oryzias_melastigma
ENSPMEG00000006928	zc3h13	100	99.115	ENSPFOG00000005039	zc3h13	100	99.115	Poecilia_formosa
ENSPMEG00000006928	zc3h13	100	98.341	ENSPLAG00000014095	zc3h13	100	98.341	Poecilia_latipinna
ENSPMEG00000006928	zc3h13	100	96.403	ENSPREG00000010526	zc3h13	73	95.332	Poecilia_reticulata
ENSPMEG00000006928	zc3h13	64	66.079	ENSPCAG00000001146	ZC3H13	66	60.741	Procavia_capensis
ENSPMEG00000006928	zc3h13	51	55.326	ENSPNAG00000011008	zc3h13	70	72.115	Pygocentrus_nattereri
ENSPMEG00000006928	zc3h13	56	62.140	ENSSPUG00000013358	ZC3H13	62	62.140	Sphenodon_punctatus
ENSPMEG00000006928	zc3h13	73	82.979	ENSTNIG00000014523	zc3h13	93	84.058	Tetraodon_nigroviridis
ENSPMEG00000006928	zc3h13	74	57.025	ENSVPAG00000005179	ZC3H13	61	57.025	Vicugna_pacos
ENSPMEG00000006928	zc3h13	92	49.649	ENSXETG00000014637	zc3h13	98	47.468	Xenopus_tropicalis