EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000007042 (Gene tree)
Gene ID: 106909733
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog A-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 11427 bases
Position: chrKQ554197.1:3415-14841
Accession: 106909733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000005656	Nop52	PF05997.12	5.3e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000007147	-	3065	XM_014976171	ENSPMEP00000005656	841 (aa)	XP_014831657	UPI00072EA7ED

Gene Model

Click here to download ENSPMEG00000007042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000007042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000007042	-	60	46.049	ENSG00000160208	RRP1B	66	46.049	Homo_sapiens
ENSPMEG00000007042	-	65	69.972	ENSAPOG00000007490	-	63	65.686	Acanthochromis_polyacanthus
ENSPMEG00000007042	-	60	43.889	ENSAMEG00000011401	RRP1B	80	42.949	Ailuropoda_melanoleuca
ENSPMEG00000007042	-	51	44.543	ENSAMEG00000011448	RRP1	83	48.446	Ailuropoda_melanoleuca
ENSPMEG00000007042	-	65	64.678	ENSAOCG00000017894	-	99	70.526	Amphiprion_ocellaris
ENSPMEG00000007042	-	72	64.678	ENSAPEG00000024150	-	63	65.217	Amphiprion_percula
ENSPMEG00000007042	-	67	66.329	ENSATEG00000005045	-	59	64.169	Anabas_testudineus
ENSPMEG00000007042	-	66	48.592	ENSACAG00000017851	RRP1B	65	48.756	Anolis_carolinensis
ENSPMEG00000007042	-	79	45.946	ENSANAG00000034889	RRP1B	64	45.946	Aotus_nancymaae
ENSPMEG00000007042	-	51	43.021	ENSBTAG00000003981	RRP1	78	48.056	Bos_taurus
ENSPMEG00000007042	-	57	46.512	ENSBTAG00000017418	RRP1B	64	46.512	Bos_taurus
ENSPMEG00000007042	-	59	46.049	ENSCJAG00000017077	RRP1B	64	46.049	Callithrix_jacchus
ENSPMEG00000007042	-	57	46.923	ENSCHIG00000021519	RRP1B	64	46.923	Capra_hircus
ENSPMEG00000007042	-	53	52.632	ENSCPOG00000002396	RRP1B	78	44.030	Cavia_porcellus
ENSPMEG00000007042	-	59	45.802	ENSCCAG00000029384	RRP1B	64	45.802	Cebus_capucinus
ENSPMEG00000007042	-	59	46.970	ENSCSAG00000007961	RRP1B	65	46.528	Chlorocebus_sabaeus
ENSPMEG00000007042	-	60	46.049	ENSCANG00000040952	RRP1B	65	46.049	Colobus_angolensis_palliatus
ENSPMEG00000007042	-	78	44.697	ENSCGRG00001023882	-	59	61.194	Cricetulus_griseus_chok1gshd
ENSPMEG00000007042	-	55	65.426	ENSCSEG00000020711	-	82	64.541	Cynoglossus_semilaevis
ENSPMEG00000007042	-	59	53.736	ENSDARG00000103337	rrp1	67	51.579	Danio_rerio
ENSPMEG00000007042	-	51	43.379	ENSDNOG00000019880	RRP1	82	47.312	Dasypus_novemcinctus
ENSPMEG00000007042	-	55	53.684	ENSETEG00000019489	RRP1B	60	54.737	Echinops_telfairi
ENSPMEG00000007042	-	60	45.430	ENSEASG00005001687	RRP1B	65	44.865	Equus_asinus_asinus
ENSPMEG00000007042	-	60	45.161	ENSECAG00000018018	RRP1B	65	44.595	Equus_caballus
ENSPMEG00000007042	-	62	61.198	ENSELUG00000015885	-	95	57.870	Esox_lucius
ENSPMEG00000007042	-	74	43.207	ENSFCAG00000010272	RRP1B	70	42.670	Felis_catus
ENSPMEG00000007042	-	58	43.796	ENSFDAG00000010899	RRP1B	68	43.796	Fukomys_damarensis
ENSPMEG00000007042	-	51	43.636	ENSFDAG00000013728	RRP1	74	50.592	Fukomys_damarensis
ENSPMEG00000007042	-	91	65.162	ENSFHEG00000016314	-	99	63.347	Fundulus_heteroclitus
ENSPMEG00000007042	-	66	60.882	ENSGMOG00000001953	-	73	59.893	Gadus_morhua
ENSPMEG00000007042	-	57	51.053	ENSGALG00000035696	RRP1B	71	50.000	Gallus_gallus
ENSPMEG00000007042	-	80	57.851	ENSGACG00000001438	rrp1	93	57.676	Gasterosteus_aculeatus
ENSPMEG00000007042	-	60	46.049	ENSGGOG00000012069	RRP1B	66	46.049	Gorilla_gorilla
ENSPMEG00000007042	-	58	43.407	ENSHGLG00000004968	RRP1B	65	43.284	Heterocephalus_glaber_female
ENSPMEG00000007042	-	51	43.284	ENSHGLG00100002232	RRP1B	56	43.284	Heterocephalus_glaber_male
ENSPMEG00000007042	-	56	56.164	ENSIPUG00000000673	-	76	52.475	Ictalurus_punctatus
ENSPMEG00000007042	-	56	46.154	ENSSTOG00000011790	RRP1B	63	46.154	Ictidomys_tridecemlineatus
ENSPMEG00000007042	-	67	41.390	ENSJJAG00000021279	Rrp1b	84	38.918	Jaculus_jaculus
ENSPMEG00000007042	-	71	67.376	ENSKMAG00000005539	rrp1	99	65.443	Kryptolebias_marmoratus
ENSPMEG00000007042	-	59	49.735	ENSLACG00000017332	-	67	49.468	Latimeria_chalumnae
ENSPMEG00000007042	-	68	57.143	ENSLOCG00000004064	-	78	56.117	Lepisosteus_oculatus
ENSPMEG00000007042	-	90	30.769	ENSLAFG00000000766	RRP1B	87	44.444	Loxodonta_africana
ENSPMEG00000007042	-	59	46.049	ENSMMUG00000000104	RRP1B	66	46.049	Macaca_mulatta
ENSPMEG00000007042	-	69	67.008	ENSMAMG00000007131	-	55	67.519	Mastacembelus_armatus
ENSPMEG00000007042	-	57	50.789	ENSMGAG00000014591	RRP1B	63	52.525	Meleagris_gallopavo
ENSPMEG00000007042	-	54	45.113	ENSMAUG00000021508	Rrp1b	67	46.269	Mesocricetus_auratus
ENSPMEG00000007042	-	59	45.161	ENSMOCG00000001117	Rrp1b	67	49.254	Microtus_ochrogaster
ENSPMEG00000007042	-	65	47.059	ENSMODG00000021033	RRP1B	70	47.059	Monodelphis_domestica
ENSPMEG00000007042	-	65	44.643	MGP_CAROLIEiJ_G0021376	Rrp1b	73	45.238	Mus_caroli
ENSPMEG00000007042	-	50	54.098	ENSMUSG00000061032	Rrp1	70	55.702	Mus_musculus
ENSPMEG00000007042	-	58	46.269	MGP_PahariEiJ_G0023695	Rrp1b	57	58.209	Mus_pahari
ENSPMEG00000007042	-	65	43.182	MGP_SPRETEiJ_G0022290	Rrp1b	75	43.182	Mus_spretus
ENSPMEG00000007042	-	50	54.098	MGP_SPRETEiJ_G0016321	Rrp1	66	55.702	Mus_spretus
ENSPMEG00000007042	-	60	45.455	ENSMLUG00000007738	RRP1B	65	46.853	Myotis_lucifugus
ENSPMEG00000007042	-	58	46.667	ENSNGAG00000021073	Rrp1b	64	46.667	Nannospalax_galili
ENSPMEG00000007042	-	60	45.777	ENSNLEG00000001490	RRP1B	68	45.777	Nomascus_leucogenys
ENSPMEG00000007042	-	59	43.988	ENSODEG00000013177	RRP1B	69	43.658	Octodon_degus
ENSPMEG00000007042	-	57	64.045	ENSONIG00000004264	rrp1	80	64.326	Oreochromis_niloticus
ENSPMEG00000007042	-	50	47.328	ENSOCUG00000025931	RRP1B	61	47.328	Oryctolagus_cuniculus
ENSPMEG00000007042	-	100	45.209	ENSORLG00020007199	-	66	65.686	Oryzias_latipes_hni
ENSPMEG00000007042	-	53	49.495	ENSOGAG00000009872	RRP1B	68	49.495	Otolemur_garnettii
ENSPMEG00000007042	-	55	45.062	ENSPPAG00000035319	RRP1B	63	44.898	Pan_paniscus
ENSPMEG00000007042	-	54	53.061	ENSPPRG00000010356	RRP1B	68	43.478	Panthera_pardus
ENSPMEG00000007042	-	56	41.231	ENSPTIG00000016894	RRP1B	89	41.231	Panthera_tigris_altaica
ENSPMEG00000007042	-	60	46.049	ENSPTRG00000013958	RRP1B	66	46.049	Pan_troglodytes
ENSPMEG00000007042	-	61	57.254	ENSPKIG00000003422	-	72	55.690	Paramormyrops_kingsleyae
ENSPMEG00000007042	-	57	45.522	ENSPEMG00000022490	Rrp1b	68	45.522	Peromyscus_maniculatus_bairdii
ENSPMEG00000007042	-	80	46.465	ENSPCIG00000015513	RRP1B	63	53.191	Phascolarctos_cinereus
ENSPMEG00000007042	-	100	87.929	ENSPFOG00000007424	-	99	87.811	Poecilia_formosa
ENSPMEG00000007042	-	82	98.124	ENSPLAG00000016684	-	99	98.124	Poecilia_latipinna
ENSPMEG00000007042	-	100	90.985	ENSPREG00000015673	-	100	90.629	Poecilia_reticulata
ENSPMEG00000007042	-	60	46.049	ENSPPYG00000011470	RRP1B	66	46.049	Pongo_abelii
ENSPMEG00000007042	-	59	47.727	ENSPCOG00000017927	RRP1B	67	47.727	Propithecus_coquereli
ENSPMEG00000007042	-	60	43.151	ENSPVAG00000001436	RRP1B	66	43.151	Pteropus_vampyrus
ENSPMEG00000007042	-	78	48.951	ENSPNAG00000007718	-	58	58.405	Pygocentrus_nattereri
ENSPMEG00000007042	-	60	46.853	ENSRROG00000031499	RRP1B	53	46.049	Rhinopithecus_roxellana
ENSPMEG00000007042	-	72	42.165	ENSSBOG00000034727	RRP1B	62	44.275	Saimiri_boliviensis_boliviensis
ENSPMEG00000007042	-	76	47.887	ENSSHAG00000017789	RRP1B	83	46.757	Sarcophilus_harrisii
ENSPMEG00000007042	-	67	70.909	ENSSMAG00000016847	-	92	68.571	Scophthalmus_maximus
ENSPMEG00000007042	-	71	66.749	ENSSLDG00000002538	-	65	67.157	Seriola_lalandi_dorsalis
ENSPMEG00000007042	-	51	41.901	ENSSARG00000003108	-	64	41.549	Sorex_araneus
ENSPMEG00000007042	-	64	69.231	ENSSPAG00000005370	-	64	65.574	Stegastes_partitus
ENSPMEG00000007042	-	57	52.041	ENSSSCG00000021698	RRP1B	68	52.041	Sus_scrofa
ENSPMEG00000007042	-	60	62.570	ENSTNIG00000005053	rrp1	81	64.246	Tetraodon_nigroviridis
ENSPMEG00000007042	-	55	43.314	ENSTBEG00000000422	RRP1B	80	43.314	Tupaia_belangeri
ENSPMEG00000007042	-	60	42.520	ENSTTRG00000000723	RRP1B	68	42.010	Tursiops_truncatus
ENSPMEG00000007042	-	78	44.414	ENSUAMG00000026765	RRP1B	72	44.414	Ursus_americanus
ENSPMEG00000007042	-	62	41.243	ENSUMAG00000025510	RRP1B	98	41.240	Ursus_maritimus
ENSPMEG00000007042	-	66	47.253	ENSXETG00000013683	rrp1b	86	47.253	Xenopus_tropicalis
ENSPMEG00000007042	-	100	85.614	ENSXMAG00000023123	-	100	84.561	Xiphophorus_maculatus