EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000007165 (Gene tree)
Gene ID: 106923665
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 12410 bases
Position: chrKQ551623.1:223955-236364
Accession: 106923665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000005755	MMR_HSR1	PF01926.23	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000006989	-	5554	XM_014996881	ENSPMEP00000005755	209 (aa)	XP_014852367	UPI00044413BC

Gene Model

Click here to download ENSPMEG00000007165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000007165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000007165	si:dkey-16l2.16	98	38.462	ENSPMEG00000000804	rab11al	96	38.462
ENSPMEG00000007165	si:dkey-16l2.16	78	44.172	ENSPMEG00000006424	-	87	43.972
ENSPMEG00000007165	si:dkey-16l2.16	77	61.111	ENSPMEG00000002054	rab1ba	81	61.111
ENSPMEG00000007165	si:dkey-16l2.16	99	69.082	ENSPMEG00000021947	rab35b	99	69.082
ENSPMEG00000007165	si:dkey-16l2.16	77	38.509	ENSPMEG00000003743	rab22a	83	38.509
ENSPMEG00000007165	si:dkey-16l2.16	98	40.191	ENSPMEG00000007842	-	96	40.191
ENSPMEG00000007165	si:dkey-16l2.16	81	37.143	ENSPMEG00000013734	rab9b	78	37.143
ENSPMEG00000007165	si:dkey-16l2.16	96	35.266	ENSPMEG00000010190	RAB9A	90	35.266
ENSPMEG00000007165	si:dkey-16l2.16	75	46.012	ENSPMEG00000003177	rab33a	58	46.012
ENSPMEG00000007165	si:dkey-16l2.16	80	38.150	ENSPMEG00000004392	RAB7A	83	38.150
ENSPMEG00000007165	si:dkey-16l2.16	80	40.237	ENSPMEG00000012205	rab4a	79	40.237
ENSPMEG00000007165	si:dkey-16l2.16	78	34.940	ENSPMEG00000014302	rheb	89	34.940
ENSPMEG00000007165	si:dkey-16l2.16	80	41.420	ENSPMEG00000017161	-	69	41.420
ENSPMEG00000007165	si:dkey-16l2.16	78	46.951	ENSPMEG00000008223	rab18b	80	46.951
ENSPMEG00000007165	si:dkey-16l2.16	58	30.657	ENSPMEG00000013451	arfrp1	66	30.657
ENSPMEG00000007165	si:dkey-16l2.16	50	34.906	ENSPMEG00000018380	rras2	63	34.906
ENSPMEG00000007165	si:dkey-16l2.16	87	47.802	ENSPMEG00000008020	-	91	47.802
ENSPMEG00000007165	si:dkey-16l2.16	81	37.143	ENSPMEG00000024399	rab9b	78	37.143
ENSPMEG00000007165	si:dkey-16l2.16	99	32.558	ENSPMEG00000013297	rab34b	83	32.558
ENSPMEG00000007165	si:dkey-16l2.16	79	44.048	ENSPMEG00000004946	RAB39B	79	44.048
ENSPMEG00000007165	si:dkey-16l2.16	74	32.919	ENSPMEG00000018256	dnajc27	59	32.919
ENSPMEG00000007165	si:dkey-16l2.16	82	40.462	ENSPMEG00000010417	rab12	71	40.462
ENSPMEG00000007165	si:dkey-16l2.16	83	43.103	ENSPMEG00000005491	rab25a	82	43.103
ENSPMEG00000007165	si:dkey-16l2.16	55	31.034	ENSPMEG00000008907	arl3	61	31.034
ENSPMEG00000007165	si:dkey-16l2.16	78	35.542	ENSPMEG00000020891	hrasb	87	35.542
ENSPMEG00000007165	si:dkey-16l2.16	79	37.059	ENSPMEG00000019159	si:dkey-13a21.4	83	37.059
ENSPMEG00000007165	si:dkey-16l2.16	95	30.198	ENSPMEG00000000572	rras	95	30.198
ENSPMEG00000007165	si:dkey-16l2.16	55	30.172	ENSPMEG00000007916	arl3l2	62	30.172
ENSPMEG00000007165	si:dkey-16l2.16	78	37.278	ENSPMEG00000021807	RAB29	80	37.278
ENSPMEG00000007165	si:dkey-16l2.16	76	44.025	ENSPMEG00000007238	rab5aa	74	44.025
ENSPMEG00000007165	si:dkey-16l2.16	83	31.250	ENSPMEG00000020579	rhebl1	93	31.250
ENSPMEG00000007165	si:dkey-16l2.16	98	40.777	ENSPMEG00000012389	rab11bb	96	40.777
ENSPMEG00000007165	si:dkey-16l2.16	74	44.379	ENSPMEG00000022709	rab33ba	70	44.379
ENSPMEG00000007165	si:dkey-16l2.16	78	31.707	ENSPMEG00000001179	-	83	31.707
ENSPMEG00000007165	si:dkey-16l2.16	77	41.818	ENSPMEG00000021872	rab6bb	79	41.818
ENSPMEG00000007165	si:dkey-16l2.16	77	63.580	ENSPMEG00000003046	rab1ab	80	63.580
ENSPMEG00000007165	si:dkey-16l2.16	72	30.061	ENSPMEG00000005938	arl1	81	30.061
ENSPMEG00000007165	si:dkey-16l2.16	79	44.643	ENSPMEG00000007976	-	79	44.643
ENSPMEG00000007165	si:dkey-16l2.16	77	41.212	ENSPMEG00000019167	rab6ba	79	41.212
ENSPMEG00000007165	si:dkey-16l2.16	96	35.821	ENSPMEG00000011336	rab5c	89	37.313
ENSPMEG00000007165	si:dkey-16l2.16	76	33.742	ENSPMEG00000011210	si:cabz01085950.1	81	33.742
ENSPMEG00000007165	si:dkey-16l2.16	96	35.885	ENSPMEG00000023735	rab9a	97	35.885
ENSPMEG00000007165	si:dkey-16l2.16	98	40.191	ENSPMEG00000007917	rab11ba	72	40.191
ENSPMEG00000007165	si:dkey-16l2.16	95	35.096	ENSPMEG00000002086	rab34a	77	35.096
ENSPMEG00000007165	si:dkey-16l2.16	76	46.341	ENSPMEG00000010152	zgc:101559	70	46.341
ENSPMEG00000007165	si:dkey-16l2.16	81	45.349	ENSPMEG00000019497	rab42a	79	45.349
ENSPMEG00000007165	si:dkey-16l2.16	78	42.945	ENSPMEG00000010857	rab14	76	42.945
ENSPMEG00000007165	si:dkey-16l2.16	84	45.198	ENSPMEG00000000408	RAB15	84	45.198
ENSPMEG00000007165	si:dkey-16l2.16	80	41.860	ENSPMEG00000012932	si:dkey-34d22.5	77	41.860
ENSPMEG00000007165	si:dkey-16l2.16	87	47.802	ENSPMEG00000022988	-	91	47.802
ENSPMEG00000007165	si:dkey-16l2.16	73	40.252	ENSPMEG00000015292	rab36	89	40.252
ENSPMEG00000007165	si:dkey-16l2.16	77	40.854	ENSPMEG00000003369	rab6a	79	40.854
ENSPMEG00000007165	si:dkey-16l2.16	85	45.506	ENSPMEG00000009701	rab30	88	45.506
ENSPMEG00000007165	si:dkey-16l2.16	79	31.492	ENSPMEG00000018145	rasl11a	69	31.492
ENSPMEG00000007165	si:dkey-16l2.16	80	41.420	ENSPMEG00000002564	-	69	41.420
ENSPMEG00000007165	si:dkey-16l2.16	84	48.588	ENSPMEG00000021986	rab15	83	48.588
ENSPMEG00000007165	si:dkey-16l2.16	98	41.346	ENSPMEG00000007932	rab11a	96	41.346
ENSPMEG00000007165	si:dkey-16l2.16	73	34.868	ENSPMEG00000004703	rabl2	68	34.868
ENSPMEG00000007165	si:dkey-16l2.16	73	42.208	ENSPMEG00000014170	rab41	73	42.208
ENSPMEG00000007165	si:dkey-16l2.16	80	38.150	ENSPMEG00000021641	-	83	38.150
ENSPMEG00000007165	si:dkey-16l2.16	84	58.791	ENSPMEG00000005288	-	90	58.791
ENSPMEG00000007165	si:dkey-16l2.16	53	33.628	ENSPMEG00000017927	RRAS2	80	33.628
ENSPMEG00000007165	si:dkey-16l2.16	77	34.568	ENSPMEG00000019525	KRAS	94	32.584
ENSPMEG00000007165	si:dkey-16l2.16	76	41.509	ENSPMEG00000012614	-	88	35.821
ENSPMEG00000007165	si:dkey-16l2.16	69	45.395	ENSPMEG00000019646	-	63	45.395
ENSPMEG00000007165	si:dkey-16l2.16	98	40.097	ENSPMEG00000001400	rab25b	96	40.097
ENSPMEG00000007165	si:dkey-16l2.16	74	33.766	ENSPMEG00000017300	rab23	78	34.375
ENSPMEG00000007165	si:dkey-16l2.16	77	64.198	ENSPMEG00000022350	zgc:171927	77	65.000
ENSPMEG00000007165	si:dkey-16l2.16	78	46.341	ENSPMEG00000013085	rab18a	80	46.341
ENSPMEG00000007165	si:dkey-16l2.16	53	33.628	ENSPMEG00000010573	-	80	33.628

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000007165	si:dkey-16l2.16	100	87.081	ENSAPOG00000008263	si:dkey-16l2.16	100	87.081	Acanthochromis_polyacanthus
ENSPMEG00000007165	si:dkey-16l2.16	100	88.517	ENSAOCG00000016825	si:dkey-16l2.16	100	88.517	Amphiprion_ocellaris
ENSPMEG00000007165	si:dkey-16l2.16	100	88.517	ENSAPEG00000006500	si:dkey-16l2.16	100	88.517	Amphiprion_percula
ENSPMEG00000007165	si:dkey-16l2.16	100	88.517	ENSATEG00000019238	si:dkey-16l2.16	100	88.517	Anabas_testudineus
ENSPMEG00000007165	si:dkey-16l2.16	100	88.995	ENSACLG00000018721	si:dkey-16l2.16	100	88.995	Astatotilapia_calliptera
ENSPMEG00000007165	si:dkey-16l2.16	100	87.560	ENSAMXG00000038243	si:dkey-16l2.16	94	96.610	Astyanax_mexicanus
ENSPMEG00000007165	si:dkey-16l2.16	56	96.610	ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	Cynoglossus_semilaevis
ENSPMEG00000007165	si:dkey-16l2.16	100	92.344	ENSCVAG00000003537	si:dkey-16l2.16	100	92.344	Cyprinodon_variegatus
ENSPMEG00000007165	si:dkey-16l2.16	100	86.603	ENSDARG00000037967	si:dkey-16l2.16	99	95.763	Danio_rerio
ENSPMEG00000007165	si:dkey-16l2.16	99	82.212	ENSELUG00000023247	si:dkey-16l2.16	99	82.212	Esox_lucius
ENSPMEG00000007165	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSPMEG00000007165	si:dkey-16l2.16	77	84.472	ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	Gadus_morhua
ENSPMEG00000007165	si:dkey-16l2.16	100	99.043	ENSGAFG00000005388	si:dkey-16l2.16	100	99.043	Gambusia_affinis
ENSPMEG00000007165	si:dkey-16l2.16	100	87.081	ENSGACG00000014915	si:dkey-16l2.16	98	87.081	Gasterosteus_aculeatus
ENSPMEG00000007165	si:dkey-16l2.16	100	89.474	ENSHBUG00000019261	si:dkey-16l2.16	100	89.474	Haplochromis_burtoni
ENSPMEG00000007165	si:dkey-16l2.16	100	87.560	ENSHCOG00000006538	si:dkey-16l2.16	100	87.560	Hippocampus_comes
ENSPMEG00000007165	si:dkey-16l2.16	100	87.081	ENSKMAG00000003494	si:dkey-16l2.16	100	87.081	Kryptolebias_marmoratus
ENSPMEG00000007165	si:dkey-16l2.16	100	88.995	ENSLBEG00000007681	si:dkey-16l2.16	100	88.995	Labrus_bergylta
ENSPMEG00000007165	si:dkey-16l2.16	100	88.995	ENSMAMG00000019230	si:dkey-16l2.16	100	88.995	Mastacembelus_armatus
ENSPMEG00000007165	si:dkey-16l2.16	100	88.995	ENSMZEG00005002081	si:dkey-16l2.16	100	88.995	Maylandia_zebra
ENSPMEG00000007165	si:dkey-16l2.16	99	88.350	ENSMMOG00000020140	si:dkey-16l2.16	97	88.350	Mola_mola
ENSPMEG00000007165	si:dkey-16l2.16	100	88.038	ENSMALG00000014727	si:dkey-16l2.16	99	88.038	Monopterus_albus
ENSPMEG00000007165	si:dkey-16l2.16	100	88.517	ENSNBRG00000008930	si:dkey-16l2.16	100	88.517	Neolamprologus_brichardi
ENSPMEG00000007165	si:dkey-16l2.16	100	88.995	ENSONIG00000009443	si:dkey-16l2.16	100	88.995	Oreochromis_niloticus
ENSPMEG00000007165	si:dkey-16l2.16	100	85.167	ENSORLG00000001098	si:dkey-16l2.16	99	85.167	Oryzias_latipes
ENSPMEG00000007165	si:dkey-16l2.16	100	85.167	ENSORLG00020000867	si:dkey-16l2.16	99	85.167	Oryzias_latipes_hni
ENSPMEG00000007165	si:dkey-16l2.16	100	85.646	ENSOMEG00000015474	si:dkey-16l2.16	100	86.603	Oryzias_melastigma
ENSPMEG00000007165	si:dkey-16l2.16	100	85.646	ENSPKIG00000005686	-	100	85.646	Paramormyrops_kingsleyae
ENSPMEG00000007165	si:dkey-16l2.16	100	76.077	ENSPKIG00000018888	si:dkey-16l2.16	100	76.077	Paramormyrops_kingsleyae
ENSPMEG00000007165	si:dkey-16l2.16	100	88.038	ENSPMGG00000000751	si:dkey-16l2.16	100	88.038	Periophthalmus_magnuspinnatus
ENSPMEG00000007165	si:dkey-16l2.16	100	100.000	ENSPFOG00000004746	si:dkey-16l2.16	100	100.000	Poecilia_formosa
ENSPMEG00000007165	si:dkey-16l2.16	100	99.522	ENSPLAG00000021043	si:dkey-16l2.16	100	99.522	Poecilia_latipinna
ENSPMEG00000007165	si:dkey-16l2.16	100	99.522	ENSPREG00000005323	si:dkey-16l2.16	100	99.522	Poecilia_reticulata
ENSPMEG00000007165	si:dkey-16l2.16	100	89.474	ENSPNYG00000009490	si:dkey-16l2.16	100	89.474	Pundamilia_nyererei
ENSPMEG00000007165	si:dkey-16l2.16	100	88.038	ENSPNAG00000018986	si:dkey-16l2.16	100	88.038	Pygocentrus_nattereri
ENSPMEG00000007165	si:dkey-16l2.16	99	77.404	ENSSFOG00015006414	-	99	77.404	Scleropages_formosus
ENSPMEG00000007165	si:dkey-16l2.16	100	86.603	ENSSFOG00015021448	-	100	86.603	Scleropages_formosus
ENSPMEG00000007165	si:dkey-16l2.16	100	85.167	ENSSMAG00000011769	si:dkey-16l2.16	94	85.167	Scophthalmus_maximus
ENSPMEG00000007165	si:dkey-16l2.16	100	90.431	ENSSDUG00000005719	si:dkey-16l2.16	100	90.431	Seriola_dumerili
ENSPMEG00000007165	si:dkey-16l2.16	100	90.431	ENSSLDG00000003631	si:dkey-16l2.16	100	90.431	Seriola_lalandi_dorsalis
ENSPMEG00000007165	si:dkey-16l2.16	100	89.474	ENSSPAG00000006302	si:dkey-16l2.16	100	89.474	Stegastes_partitus
ENSPMEG00000007165	si:dkey-16l2.16	100	88.517	ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	Takifugu_rubripes
ENSPMEG00000007165	si:dkey-16l2.16	100	89.474	ENSTNIG00000011300	si:dkey-16l2.16	100	89.474	Tetraodon_nigroviridis
ENSPMEG00000007165	si:dkey-16l2.16	100	99.522	ENSXMAG00000021767	si:dkey-16l2.16	100	99.522	Xiphophorus_maculatus