EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000007495 (Gene tree)
Gene ID: 106909714
Gene Symbol: stau1
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 5832 bases
Position: chrKQ554189.1:7502-13333
Accession: 106909714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000024883	dsrm	PF00035.26	1.4e-48	1	4
ENSPMEP00000024883	dsrm	PF00035.26	1.4e-48	2	4
ENSPMEP00000024883	dsrm	PF00035.26	1.4e-48	3	4
ENSPMEP00000024883	dsrm	PF00035.26	1.4e-48	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000006514	-	2058	XM_014976148	ENSPMEP00000024883	685 (aa)	XP_014831634	-

Gene Model

Click here to download ENSPMEG00000007495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000007495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000007495	stau1	86	48.253	ENSPMEG00000014168	stau2	98	46.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000007495	stau1	94	73.125	ENSG00000124214	STAU1	94	73.125	Homo_sapiens
ENSPMEG00000007495	stau1	100	86.152	ENSAPOG00000017260	stau1	100	86.152	Acanthochromis_polyacanthus
ENSPMEG00000007495	stau1	94	70.588	ENSAMEG00000013681	STAU1	91	70.588	Ailuropoda_melanoleuca
ENSPMEG00000007495	stau1	99	82.590	ENSACIG00000015918	stau1	100	83.477	Amphilophus_citrinellus
ENSPMEG00000007495	stau1	99	86.043	ENSAOCG00000012224	stau1	99	86.043	Amphiprion_ocellaris
ENSPMEG00000007495	stau1	99	86.043	ENSAPEG00000012308	stau1	99	86.043	Amphiprion_percula
ENSPMEG00000007495	stau1	99	85.755	ENSATEG00000024600	stau1	100	85.632	Anabas_testudineus
ENSPMEG00000007495	stau1	100	68.414	ENSAPLG00000010527	STAU1	100	68.414	Anas_platyrhynchos
ENSPMEG00000007495	stau1	100	68.688	ENSACAG00000015909	STAU1	99	68.688	Anolis_carolinensis
ENSPMEG00000007495	stau1	94	72.016	ENSANAG00000032714	STAU1	94	72.016	Aotus_nancymaae
ENSPMEG00000007495	stau1	99	84.317	ENSACLG00000012270	stau1	99	84.317	Astatotilapia_calliptera
ENSPMEG00000007495	stau1	85	74.369	ENSAMXG00000016812	stau1	93	74.563	Astyanax_mexicanus
ENSPMEG00000007495	stau1	94	72.917	ENSBTAG00000000241	STAU1	94	72.917	Bos_taurus
ENSPMEG00000007495	stau1	94	72.917	ENSCJAG00000016233	STAU1	94	72.917	Callithrix_jacchus
ENSPMEG00000007495	stau1	94	72.917	ENSCAFG00000011347	STAU1	92	72.917	Canis_familiaris
ENSPMEG00000007495	stau1	94	69.632	ENSCAFG00020017123	STAU1	95	72.586	Canis_lupus_dingo
ENSPMEG00000007495	stau1	94	72.500	ENSCHIG00000001799	-	94	72.500	Capra_hircus
ENSPMEG00000007495	stau1	94	71.667	ENSTSYG00000036179	-	94	71.667	Carlito_syrichta
ENSPMEG00000007495	stau1	69	71.702	ENSCAPG00000017041	STAU1	93	71.489	Cavia_aperea
ENSPMEG00000007495	stau1	67	69.872	ENSCPOG00000005566	STAU1	93	69.872	Cavia_porcellus
ENSPMEG00000007495	stau1	94	72.016	ENSCCAG00000034339	STAU1	94	72.016	Cebus_capucinus
ENSPMEG00000007495	stau1	94	75.115	ENSCATG00000028474	STAU1	94	75.115	Cercocebus_atys
ENSPMEG00000007495	stau1	67	72.863	ENSCLAG00000006516	-	93	72.863	Chinchilla_lanigera
ENSPMEG00000007495	stau1	69	58.898	ENSCLAG00000002784	-	94	58.263	Chinchilla_lanigera
ENSPMEG00000007495	stau1	69	73.191	ENSCSAG00000014986	STAU1	93	73.191	Chlorocebus_sabaeus
ENSPMEG00000007495	stau1	94	73.181	ENSCHOG00000001511	STAU1	94	73.181	Choloepus_hoffmanni
ENSPMEG00000007495	stau1	100	69.209	ENSCPBG00000026741	STAU1	100	69.209	Chrysemys_picta_bellii
ENSPMEG00000007495	stau1	94	73.333	ENSCANG00000039220	STAU1	94	73.333	Colobus_angolensis_palliatus
ENSPMEG00000007495	stau1	67	68.590	ENSCGRG00001013453	Stau1	93	68.590	Cricetulus_griseus_chok1gshd
ENSPMEG00000007495	stau1	67	68.590	ENSCGRG00000007216	Stau1	93	68.590	Cricetulus_griseus_crigri
ENSPMEG00000007495	stau1	99	72.535	ENSCSEG00000000792	stau1	99	73.662	Cynoglossus_semilaevis
ENSPMEG00000007495	stau1	91	85.155	ENSCVAG00000005906	stau1	95	86.392	Cyprinodon_variegatus
ENSPMEG00000007495	stau1	100	74.928	ENSDARG00000044182	stau1	100	75.706	Danio_rerio
ENSPMEG00000007495	stau1	94	73.181	ENSDNOG00000014933	STAU1	92	72.973	Dasypus_novemcinctus
ENSPMEG00000007495	stau1	67	71.645	ENSDORG00000030220	Stau1	93	71.645	Dipodomys_ordii
ENSPMEG00000007495	stau1	60	75.926	ENSETEG00000018235	STAU1	82	75.926	Echinops_telfairi
ENSPMEG00000007495	stau1	94	72.428	ENSEASG00005023343	STAU1	94	72.428	Equus_asinus_asinus
ENSPMEG00000007495	stau1	94	73.333	ENSECAG00000012894	STAU1	94	73.333	Equus_caballus
ENSPMEG00000007495	stau1	53	77.348	ENSEEUG00000014344	STAU1	63	77.348	Erinaceus_europaeus
ENSPMEG00000007495	stau1	99	77.086	ENSELUG00000002529	stau1	99	77.950	Esox_lucius
ENSPMEG00000007495	stau1	94	73.333	ENSFCAG00000001447	STAU1	94	73.333	Felis_catus
ENSPMEG00000007495	stau1	100	69.417	ENSFALG00000012940	STAU1	100	69.417	Ficedula_albicollis
ENSPMEG00000007495	stau1	67	72.650	ENSFDAG00000014119	-	93	72.650	Fukomys_damarensis
ENSPMEG00000007495	stau1	68	54.371	ENSFDAG00000020837	-	92	52.239	Fukomys_damarensis
ENSPMEG00000007495	stau1	100	89.655	ENSFHEG00000013517	stau1	100	89.655	Fundulus_heteroclitus
ENSPMEG00000007495	stau1	100	67.598	ENSGMOG00000016850	stau1	100	67.316	Gadus_morhua
ENSPMEG00000007495	stau1	100	70.270	ENSGALG00000004736	STAU1	100	70.270	Gallus_gallus
ENSPMEG00000007495	stau1	100	93.391	ENSGAFG00000010437	stau1	100	93.391	Gambusia_affinis
ENSPMEG00000007495	stau1	99	83.885	ENSGACG00000001352	stau1	99	83.885	Gasterosteus_aculeatus
ENSPMEG00000007495	stau1	100	69.801	ENSGAGG00000009825	STAU1	100	69.801	Gopherus_agassizii
ENSPMEG00000007495	stau1	94	67.213	ENSGGOG00000025351	STAU1	93	72.059	Gorilla_gorilla
ENSPMEG00000007495	stau1	99	84.173	ENSHBUG00000023668	stau1	99	84.173	Haplochromis_burtoni
ENSPMEG00000007495	stau1	67	73.377	ENSHGLG00000008730	STAU1	93	73.377	Heterocephalus_glaber_female
ENSPMEG00000007495	stau1	67	73.377	ENSHGLG00100000098	STAU1	93	73.377	Heterocephalus_glaber_male
ENSPMEG00000007495	stau1	99	78.910	ENSHCOG00000018461	stau1	100	78.940	Hippocampus_comes
ENSPMEG00000007495	stau1	99	74.927	ENSIPUG00000023725	stau1	99	74.927	Ictalurus_punctatus
ENSPMEG00000007495	stau1	67	72.727	ENSSTOG00000003634	STAU1	93	72.727	Ictidomys_tridecemlineatus
ENSPMEG00000007495	stau1	67	72.078	ENSJJAG00000020032	Stau1	93	72.078	Jaculus_jaculus
ENSPMEG00000007495	stau1	99	81.375	ENSKMAG00000007135	stau1	99	82.378	Kryptolebias_marmoratus
ENSPMEG00000007495	stau1	100	83.190	ENSLBEG00000020172	stau1	100	83.190	Labrus_bergylta
ENSPMEG00000007495	stau1	98	69.373	ENSLACG00000016157	STAU1	97	69.373	Latimeria_chalumnae
ENSPMEG00000007495	stau1	100	72.023	ENSLOCG00000003134	stau1	100	73.027	Lepisosteus_oculatus
ENSPMEG00000007495	stau1	70	73.333	ENSLAFG00000003238	STAU1	93	73.333	Loxodonta_africana
ENSPMEG00000007495	stau1	94	75.115	ENSMFAG00000040931	STAU1	94	75.115	Macaca_fascicularis
ENSPMEG00000007495	stau1	94	67.213	ENSMMUG00000002302	STAU1	93	72.059	Macaca_mulatta
ENSPMEG00000007495	stau1	94	74.091	ENSMNEG00000033821	STAU1	94	74.091	Macaca_nemestrina
ENSPMEG00000007495	stau1	94	73.125	ENSMLEG00000031383	STAU1	94	73.125	Mandrillus_leucophaeus
ENSPMEG00000007495	stau1	99	85.180	ENSMAMG00000017586	stau1	100	85.057	Mastacembelus_armatus
ENSPMEG00000007495	stau1	99	84.317	ENSMZEG00005015605	stau1	99	84.317	Maylandia_zebra
ENSPMEG00000007495	stau1	100	68.414	ENSMGAG00000004719	STAU1	100	68.414	Meleagris_gallopavo
ENSPMEG00000007495	stau1	67	68.590	ENSMAUG00000013846	Stau1	93	68.590	Mesocricetus_auratus
ENSPMEG00000007495	stau1	94	72.016	ENSMICG00000001995	STAU1	94	72.016	Microcebus_murinus
ENSPMEG00000007495	stau1	67	69.697	ENSMOCG00000018743	Stau1	93	69.231	Microtus_ochrogaster
ENSPMEG00000007495	stau1	100	85.693	ENSMMOG00000015455	stau1	100	85.007	Mola_mola
ENSPMEG00000007495	stau1	94	72.248	ENSMODG00000016276	STAU1	95	72.248	Monodelphis_domestica
ENSPMEG00000007495	stau1	99	84.892	ENSMALG00000000045	stau1	99	84.892	Monopterus_albus
ENSPMEG00000007495	stau1	67	69.697	MGP_CAROLIEiJ_G0024699	Stau1	94	69.697	Mus_caroli
ENSPMEG00000007495	stau1	67	69.481	ENSMUSG00000039536	Stau1	94	69.481	Mus_musculus
ENSPMEG00000007495	stau1	67	69.048	MGP_PahariEiJ_G0026141	Stau1	93	69.048	Mus_pahari
ENSPMEG00000007495	stau1	67	69.481	MGP_SPRETEiJ_G0025619	Stau1	94	69.481	Mus_spretus
ENSPMEG00000007495	stau1	94	69.814	ENSMPUG00000017581	STAU1	95	69.814	Mustela_putorius_furo
ENSPMEG00000007495	stau1	94	71.636	ENSMLUG00000008407	STAU1	92	71.636	Myotis_lucifugus
ENSPMEG00000007495	stau1	67	71.154	ENSNGAG00000007108	Stau1	93	71.154	Nannospalax_galili
ENSPMEG00000007495	stau1	99	84.029	ENSNBRG00000017596	stau1	99	84.029	Neolamprologus_brichardi
ENSPMEG00000007495	stau1	94	73.125	ENSNLEG00000006955	STAU1	94	73.125	Nomascus_leucogenys
ENSPMEG00000007495	stau1	63	76.798	ENSMEUG00000003263	STAU1	75	76.798	Notamacropus_eugenii
ENSPMEG00000007495	stau1	88	70.833	ENSOPRG00000014569	STAU1	83	70.833	Ochotona_princeps
ENSPMEG00000007495	stau1	69	73.191	ENSODEG00000006523	STAU1	93	73.191	Octodon_degus
ENSPMEG00000007495	stau1	99	81.958	ENSONIG00000004152	stau1	99	81.844	Oreochromis_niloticus
ENSPMEG00000007495	stau1	100	67.701	ENSOANG00000006394	STAU1	100	67.701	Ornithorhynchus_anatinus
ENSPMEG00000007495	stau1	94	72.083	ENSOCUG00000006214	STAU1	94	72.083	Oryctolagus_cuniculus
ENSPMEG00000007495	stau1	100	82.066	ENSOMEG00000002388	stau1	100	82.066	Oryzias_melastigma
ENSPMEG00000007495	stau1	94	73.125	ENSOGAG00000002127	STAU1	92	73.125	Otolemur_garnettii
ENSPMEG00000007495	stau1	68	48.723	ENSOGAG00000028222	-	92	47.974	Otolemur_garnettii
ENSPMEG00000007495	stau1	94	72.500	ENSOARG00000012204	STAU1	95	69.814	Ovis_aries
ENSPMEG00000007495	stau1	94	67.213	ENSPPAG00000032023	STAU1	93	72.059	Pan_paniscus
ENSPMEG00000007495	stau1	94	73.333	ENSPPRG00000003436	STAU1	94	73.333	Panthera_pardus
ENSPMEG00000007495	stau1	94	73.333	ENSPTIG00000011768	STAU1	98	70.961	Panthera_tigris_altaica
ENSPMEG00000007495	stau1	94	67.213	ENSPTRG00000023130	STAU1	93	72.059	Pan_troglodytes
ENSPMEG00000007495	stau1	94	75.115	ENSPANG00000020560	STAU1	94	75.115	Papio_anubis
ENSPMEG00000007495	stau1	99	73.550	ENSPKIG00000024588	stau1	99	74.540	Paramormyrops_kingsleyae
ENSPMEG00000007495	stau1	100	69.943	ENSPSIG00000010731	STAU1	99	69.943	Pelodiscus_sinensis
ENSPMEG00000007495	stau1	100	80.372	ENSPMGG00000018553	stau1	100	80.229	Periophthalmus_magnuspinnatus
ENSPMEG00000007495	stau1	67	68.803	ENSPEMG00000022045	Stau1	93	68.803	Peromyscus_maniculatus_bairdii
ENSPMEG00000007495	stau1	99	67.660	ENSPCIG00000023269	STAU1	96	71.695	Phascolarctos_cinereus
ENSPMEG00000007495	stau1	100	95.402	ENSPFOG00000017253	stau1	100	95.402	Poecilia_formosa
ENSPMEG00000007495	stau1	59	95.522	ENSPLAG00000014829	stau1	97	96.154	Poecilia_latipinna
ENSPMEG00000007495	stau1	100	94.253	ENSPREG00000003477	stau1	100	94.253	Poecilia_reticulata
ENSPMEG00000007495	stau1	94	72.708	ENSPPYG00000011111	STAU1	94	72.708	Pongo_abelii
ENSPMEG00000007495	stau1	70	66.458	ENSPCAG00000002459	STAU1	100	66.458	Procavia_capensis
ENSPMEG00000007495	stau1	94	72.917	ENSPCOG00000027746	STAU1	94	72.917	Propithecus_coquereli
ENSPMEG00000007495	stau1	59	76.667	ENSPVAG00000015019	STAU1	81	76.667	Pteropus_vampyrus
ENSPMEG00000007495	stau1	99	84.173	ENSPNYG00000014436	stau1	99	84.173	Pundamilia_nyererei
ENSPMEG00000007495	stau1	99	74.245	ENSPNAG00000011323	stau1	99	74.245	Pygocentrus_nattereri
ENSPMEG00000007495	stau1	67	68.590	ENSRNOG00000007781	Stau1	93	68.590	Rattus_norvegicus
ENSPMEG00000007495	stau1	69	72.516	ENSRBIG00000037345	STAU1	94	72.304	Rhinopithecus_bieti
ENSPMEG00000007495	stau1	94	74.091	ENSRROG00000039008	STAU1	94	74.091	Rhinopithecus_roxellana
ENSPMEG00000007495	stau1	94	72.016	ENSSBOG00000034448	STAU1	94	72.016	Saimiri_boliviensis_boliviensis
ENSPMEG00000007495	stau1	94	73.706	ENSSHAG00000009492	STAU1	95	72.093	Sarcophilus_harrisii
ENSPMEG00000007495	stau1	99	75.753	ENSSFOG00015021497	stau1	99	75.753	Scleropages_formosus
ENSPMEG00000007495	stau1	99	85.180	ENSSMAG00000017410	stau1	100	85.057	Scophthalmus_maximus
ENSPMEG00000007495	stau1	99	85.755	ENSSDUG00000019439	stau1	99	85.755	Seriola_dumerili
ENSPMEG00000007495	stau1	99	85.755	ENSSLDG00000025040	stau1	99	85.755	Seriola_lalandi_dorsalis
ENSPMEG00000007495	stau1	100	68.644	ENSSPUG00000017983	STAU1	99	68.644	Sphenodon_punctatus
ENSPMEG00000007495	stau1	99	85.755	ENSSPAG00000019275	stau1	99	85.755	Stegastes_partitus
ENSPMEG00000007495	stau1	94	73.542	ENSSSCG00000027444	STAU1	94	73.868	Sus_scrofa
ENSPMEG00000007495	stau1	100	66.988	ENSTGUG00000008784	STAU1	100	66.988	Taeniopygia_guttata
ENSPMEG00000007495	stau1	99	81.962	ENSTRUG00000005837	stau1	99	82.973	Takifugu_rubripes
ENSPMEG00000007495	stau1	96	81.899	ENSTNIG00000014732	stau1	99	81.899	Tetraodon_nigroviridis
ENSPMEG00000007495	stau1	94	65.489	ENSTBEG00000009404	STAU1	94	65.489	Tupaia_belangeri
ENSPMEG00000007495	stau1	63	72.854	ENSTTRG00000004285	STAU1	74	72.854	Tursiops_truncatus
ENSPMEG00000007495	stau1	69	72.059	ENSUAMG00000025449	STAU1	93	72.059	Ursus_americanus
ENSPMEG00000007495	stau1	55	70.052	ENSUMAG00000024475	STAU1	89	70.052	Ursus_maritimus
ENSPMEG00000007495	stau1	94	73.542	ENSVPAG00000001313	STAU1	94	73.542	Vicugna_pacos
ENSPMEG00000007495	stau1	94	69.632	ENSVVUG00000022325	STAU1	95	69.632	Vulpes_vulpes
ENSPMEG00000007495	stau1	96	67.899	ENSXETG00000001783	stau1	96	67.604	Xenopus_tropicalis
ENSPMEG00000007495	stau1	57	93.095	ENSXCOG00000008804	stau1	98	93.095	Xiphophorus_couchianus
ENSPMEG00000007495	stau1	100	93.103	ENSXMAG00000016175	stau1	100	93.103	Xiphophorus_maculatus