EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000007538 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: -
Full Name: si:ch211-153b23.4
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 2973 bases
Position: chrKQ554889.1:21032-24004
Accession: ZDB-GENE-030131-7332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000006069	Sua5_yciO_yrdC	PF01300.18	2.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000006460	-	2421	-	ENSPMEP00000006069	806 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000007538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000007538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000007538	si:ch211-153b23.4	63	33.650	ENSPMEG00000008884	si:ch211-153b23.3	58	33.650

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000007538	si:ch211-153b23.4	93	80.940	ENSAPOG00000006144	si:ch211-153b23.4	88	82.109	Acanthochromis_polyacanthus
ENSPMEG00000007538	si:ch211-153b23.4	91	82.205	ENSAPOG00000006178	si:ch211-153b23.4	87	82.205	Acanthochromis_polyacanthus
ENSPMEG00000007538	si:ch211-153b23.4	56	46.914	ENSACIG00000006968	si:ch211-153b23.3	55	46.914	Amphilophus_citrinellus
ENSPMEG00000007538	si:ch211-153b23.4	95	82.413	ENSACIG00000006997	si:ch211-153b23.4	91	82.413	Amphilophus_citrinellus
ENSPMEG00000007538	si:ch211-153b23.4	95	77.325	ENSAOCG00000010999	si:ch211-153b23.4	95	77.325	Amphiprion_ocellaris
ENSPMEG00000007538	si:ch211-153b23.4	63	31.923	ENSAOCG00000010974	si:ch211-153b23.3	58	31.923	Amphiprion_ocellaris
ENSPMEG00000007538	si:ch211-153b23.4	95	78.617	ENSAPEG00000014665	si:ch211-153b23.4	92	78.617	Amphiprion_percula
ENSPMEG00000007538	si:ch211-153b23.4	63	31.731	ENSAPEG00000014700	si:ch211-153b23.3	58	31.731	Amphiprion_percula
ENSPMEG00000007538	si:ch211-153b23.4	95	80.946	ENSATEG00000004948	si:ch211-153b23.4	89	80.946	Anabas_testudineus
ENSPMEG00000007538	si:ch211-153b23.4	94	59.872	ENSAPLG00000013596	-	92	59.843	Anas_platyrhynchos
ENSPMEG00000007538	si:ch211-153b23.4	95	79.028	ENSACLG00000005471	si:ch211-153b23.4	88	79.129	Astatotilapia_calliptera
ENSPMEG00000007538	si:ch211-153b23.4	63	32.700	ENSACLG00000005894	si:ch211-153b23.3	58	32.700	Astatotilapia_calliptera
ENSPMEG00000007538	si:ch211-153b23.4	96	71.122	ENSAMXG00000013879	si:ch211-153b23.4	93	71.122	Astyanax_mexicanus
ENSPMEG00000007538	si:ch211-153b23.4	63	33.015	ENSCSEG00000014853	si:ch211-153b23.3	58	33.015	Cynoglossus_semilaevis
ENSPMEG00000007538	si:ch211-153b23.4	95	78.133	ENSCSEG00000014838	si:ch211-153b23.4	93	78.133	Cynoglossus_semilaevis
ENSPMEG00000007538	si:ch211-153b23.4	95	89.258	ENSCVAG00000021145	si:ch211-153b23.4	97	89.258	Cyprinodon_variegatus
ENSPMEG00000007538	si:ch211-153b23.4	96	68.222	ENSDARG00000077169	si:ch211-153b23.4	90	68.222	Danio_rerio
ENSPMEG00000007538	si:ch211-153b23.4	97	69.298	ENSELUG00000004961	si:ch211-153b23.4	89	69.298	Esox_lucius
ENSPMEG00000007538	si:ch211-153b23.4	94	56.885	ENSFALG00000011343	-	87	56.992	Ficedula_albicollis
ENSPMEG00000007538	si:ch211-153b23.4	95	88.619	ENSFHEG00000010001	si:ch211-153b23.4	98	88.619	Fundulus_heteroclitus
ENSPMEG00000007538	si:ch211-153b23.4	80	97.222	ENSFHEG00000009888	si:ch211-153b23.4	73	97.222	Fundulus_heteroclitus
ENSPMEG00000007538	si:ch211-153b23.4	91	92.091	ENSGAFG00000007442	si:ch211-153b23.4	89	93.432	Gambusia_affinis
ENSPMEG00000007538	si:ch211-153b23.4	63	34.100	ENSGAFG00000007455	si:ch211-153b23.3	58	34.100	Gambusia_affinis
ENSPMEG00000007538	si:ch211-153b23.4	95	79.359	ENSGACG00000018253	si:ch211-153b23.4	92	79.359	Gasterosteus_aculeatus
ENSPMEG00000007538	si:ch211-153b23.4	82	63.690	ENSGAGG00000024601	-	92	63.504	Gopherus_agassizii
ENSPMEG00000007538	si:ch211-153b23.4	82	78.042	ENSHBUG00000000013	si:ch211-153b23.4	89	78.042	Haplochromis_burtoni
ENSPMEG00000007538	si:ch211-153b23.4	63	32.700	ENSHBUG00000001760	si:ch211-153b23.3	58	32.700	Haplochromis_burtoni
ENSPMEG00000007538	si:ch211-153b23.4	95	70.408	ENSIPUG00000015205	si:ch211-153b23.4	93	70.408	Ictalurus_punctatus
ENSPMEG00000007538	si:ch211-153b23.4	95	84.655	ENSKMAG00000006919	-	89	84.655	Kryptolebias_marmoratus
ENSPMEG00000007538	si:ch211-153b23.4	95	84.291	ENSKMAG00000006829	si:ch211-153b23.4	96	84.291	Kryptolebias_marmoratus
ENSPMEG00000007538	si:ch211-153b23.4	78	30.389	ENSKMAG00000006792	si:ch211-153b23.3	74	30.389	Kryptolebias_marmoratus
ENSPMEG00000007538	si:ch211-153b23.4	64	31.538	ENSLBEG00000026324	si:ch211-153b23.3	55	31.538	Labrus_bergylta
ENSPMEG00000007538	si:ch211-153b23.4	99	77.427	ENSLBEG00000026309	si:ch211-153b23.4	94	77.427	Labrus_bergylta
ENSPMEG00000007538	si:ch211-153b23.4	97	62.829	ENSLACG00000017592	si:ch211-153b23.4	93	62.996	Latimeria_chalumnae
ENSPMEG00000007538	si:ch211-153b23.4	95	82.225	ENSMAMG00000009358	si:ch211-153b23.4	95	82.225	Mastacembelus_armatus
ENSPMEG00000007538	si:ch211-153b23.4	95	82.737	ENSMAMG00000009277	si:ch211-153b23.4	94	82.737	Mastacembelus_armatus
ENSPMEG00000007538	si:ch211-153b23.4	63	31.731	ENSMAMG00000009328	si:ch211-153b23.3	58	31.731	Mastacembelus_armatus
ENSPMEG00000007538	si:ch211-153b23.4	95	78.617	ENSMZEG00005011433	si:ch211-153b23.4	95	78.617	Maylandia_zebra
ENSPMEG00000007538	si:ch211-153b23.4	94	60.256	ENSMGAG00000005478	-	92	60.105	Meleagris_gallopavo
ENSPMEG00000007538	si:ch211-153b23.4	95	79.231	ENSMMOG00000004425	si:ch211-153b23.4	97	79.231	Mola_mola
ENSPMEG00000007538	si:ch211-153b23.4	63	32.700	ENSNBRG00000013370	si:ch211-153b23.3	58	32.700	Neolamprologus_brichardi
ENSPMEG00000007538	si:ch211-153b23.4	95	78.562	ENSNBRG00000013392	si:ch211-153b23.4	98	78.562	Neolamprologus_brichardi
ENSPMEG00000007538	si:ch211-153b23.4	95	79.129	ENSONIG00000017875	si:ch211-153b23.4	89	79.129	Oreochromis_niloticus
ENSPMEG00000007538	si:ch211-153b23.4	95	79.615	ENSORLG00000006169	si:ch211-153b23.4	89	79.615	Oryzias_latipes
ENSPMEG00000007538	si:ch211-153b23.4	77	30.091	ENSORLG00000006161	si:ch211-153b23.3	75	30.091	Oryzias_latipes
ENSPMEG00000007538	si:ch211-153b23.4	95	80.128	ENSORLG00020009905	si:ch211-153b23.4	89	80.128	Oryzias_latipes_hni
ENSPMEG00000007538	si:ch211-153b23.4	95	79.744	ENSORLG00015003709	si:ch211-153b23.4	89	79.744	Oryzias_latipes_hsok
ENSPMEG00000007538	si:ch211-153b23.4	95	79.668	ENSOMEG00000007682	si:ch211-153b23.4	89	79.668	Oryzias_melastigma
ENSPMEG00000007538	si:ch211-153b23.4	62	33.204	ENSOMEG00000007661	si:ch211-153b23.3	59	33.204	Oryzias_melastigma
ENSPMEG00000007538	si:ch211-153b23.4	96	69.620	ENSPKIG00000025681	si:ch211-153b23.4	89	70.182	Paramormyrops_kingsleyae
ENSPMEG00000007538	si:ch211-153b23.4	96	65.995	ENSPKIG00000014429	si:ch211-153b23.4	94	65.995	Paramormyrops_kingsleyae
ENSPMEG00000007538	si:ch211-153b23.4	96	62.720	ENSPMGG00000001313	si:ch211-153b23.4	86	63.377	Periophthalmus_magnuspinnatus
ENSPMEG00000007538	si:ch211-153b23.4	80	96.067	ENSPFOG00000012164	si:ch211-153b23.4	93	96.067	Poecilia_formosa
ENSPMEG00000007538	si:ch211-153b23.4	63	32.897	ENSPFOG00000012289	si:ch211-153b23.3	58	32.897	Poecilia_formosa
ENSPMEG00000007538	si:ch211-153b23.4	95	95.769	ENSPLAG00000016295	si:ch211-153b23.4	97	95.769	Poecilia_latipinna
ENSPMEG00000007538	si:ch211-153b23.4	63	33.270	ENSPLAG00000016320	si:ch211-153b23.3	58	33.270	Poecilia_latipinna
ENSPMEG00000007538	si:ch211-153b23.4	63	32.700	ENSPNYG00000000251	si:ch211-153b23.3	58	32.700	Pundamilia_nyererei
ENSPMEG00000007538	si:ch211-153b23.4	95	78.361	ENSPNYG00000000250	si:ch211-153b23.4	95	78.361	Pundamilia_nyererei
ENSPMEG00000007538	si:ch211-153b23.4	77	30.349	ENSPNAG00000019592	si:ch211-153b23.3	73	30.349	Pygocentrus_nattereri
ENSPMEG00000007538	si:ch211-153b23.4	96	71.914	ENSPNAG00000019554	si:ch211-153b23.4	89	71.914	Pygocentrus_nattereri
ENSPMEG00000007538	si:ch211-153b23.4	94	67.726	ENSSFOG00015003920	-	87	67.708	Scleropages_formosus
ENSPMEG00000007538	si:ch211-153b23.4	63	31.992	ENSSFOG00015010910	si:ch211-153b23.3	59	31.992	Scleropages_formosus
ENSPMEG00000007538	si:ch211-153b23.4	96	70.492	ENSSFOG00015010891	si:ch211-153b23.4	91	70.581	Scleropages_formosus
ENSPMEG00000007538	si:ch211-153b23.4	95	80.051	ENSSMAG00000010067	si:ch211-153b23.4	90	80.051	Scophthalmus_maximus
ENSPMEG00000007538	si:ch211-153b23.4	95	56.527	ENSSDUG00000006842	si:ch211-153b23.4	91	56.599	Seriola_dumerili
ENSPMEG00000007538	si:ch211-153b23.4	95	80.666	ENSSDUG00000006671	si:ch211-153b23.4	97	80.666	Seriola_dumerili
ENSPMEG00000007538	si:ch211-153b23.4	81	79.254	ENSSDUG00000006931	si:ch211-153b23.4	91	79.254	Seriola_dumerili
ENSPMEG00000007538	si:ch211-153b23.4	54	34.292	ENSSLDG00000008629	si:ch211-153b23.3	51	34.292	Seriola_lalandi_dorsalis
ENSPMEG00000007538	si:ch211-153b23.4	94	59.820	ENSTGUG00000005499	-	93	59.580	Taeniopygia_guttata
ENSPMEG00000007538	si:ch211-153b23.4	95	77.209	ENSTRUG00000003247	si:ch211-153b23.4	97	77.209	Takifugu_rubripes
ENSPMEG00000007538	si:ch211-153b23.4	96	75.189	ENSTNIG00000008958	si:ch211-153b23.4	95	75.189	Tetraodon_nigroviridis
ENSPMEG00000007538	si:ch211-153b23.4	97	54.369	ENSXETG00000004489	-	88	53.970	Xenopus_tropicalis
ENSPMEG00000007538	si:ch211-153b23.4	63	33.271	ENSXMAG00000029318	si:ch211-153b23.3	58	33.271	Xiphophorus_maculatus
ENSPMEG00000007538	si:ch211-153b23.4	95	94.373	ENSXMAG00000009416	-	92	94.373	Xiphophorus_maculatus
ENSPMEG00000007538	si:ch211-153b23.4	95	94.246	ENSXMAG00000021388	si:ch211-153b23.4	94	94.246	Xiphophorus_maculatus