EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000007591 (Gene tree)
Gene ID: 106930876
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 32929 bases
Position: chrKQ552284.1:84147-117075
Accession: 106930876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000024863	RRM_1	PF00076.22	5.7e-09	1	1
ENSPMEP00000006052	RRM_1	PF00076.22	6.5e-09	1	1
ENSPMEP00000024882	RRM_1	PF00076.22	6.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000006476	SCAF8-201	8058	XM_015008693	ENSPMEP00000024882	1382 (aa)	XP_014864179	UPI00072E600D
ENSPMET00000006487	SCAF8-202	8058	XM_015008691	ENSPMEP00000006052	1382 (aa)	XP_014864177	UPI00072E600D
ENSPMET00000006524	SCAF8-203	3684	-	ENSPMEP00000024863	1227 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000007591's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000007591's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000007591	SCAF8	84	68.258	ENSG00000213079	SCAF8	85	69.297	Homo_sapiens
ENSPMEG00000007591	SCAF8	100	81.316	ENSAPOG00000015527	SCAF8	100	81.316	Acanthochromis_polyacanthus
ENSPMEG00000007591	SCAF8	84	68.516	ENSAMEG00000007583	SCAF8	83	67.909	Ailuropoda_melanoleuca
ENSPMEG00000007591	SCAF8	100	80.563	ENSAOCG00000002421	SCAF8	100	80.734	Amphiprion_ocellaris
ENSPMEG00000007591	SCAF8	98	71.782	ENSAPEG00000020115	SCAF8	68	65.955	Amphiprion_percula
ENSPMEG00000007591	SCAF8	84	82.617	ENSATEG00000006959	SCAF8	95	82.456	Anabas_testudineus
ENSPMEG00000007591	SCAF8	84	68.258	ENSANAG00000036184	SCAF8	85	69.297	Aotus_nancymaae
ENSPMEG00000007591	SCAF8	100	77.534	ENSACLG00000018828	SCAF8	100	76.950	Astatotilapia_calliptera
ENSPMEG00000007591	SCAF8	84	68.380	ENSBTAG00000031917	SCAF8	86	69.533	Bos_taurus
ENSPMEG00000007591	SCAF8	84	68.346	ENSCJAG00000012631	SCAF8	83	67.629	Callithrix_jacchus
ENSPMEG00000007591	SCAF8	84	68.516	ENSCAFG00000000570	SCAF8	85	69.365	Canis_familiaris
ENSPMEG00000007591	SCAF8	84	68.516	ENSCAFG00020015048	SCAF8	84	69.365	Canis_lupus_dingo
ENSPMEG00000007591	SCAF8	84	68.380	ENSCHIG00000025041	SCAF8	86	69.533	Capra_hircus
ENSPMEG00000007591	SCAF8	84	66.834	ENSTSYG00000010991	SCAF8	85	67.067	Carlito_syrichta
ENSPMEG00000007591	SCAF8	65	69.231	ENSCAPG00000003300	SCAF8	71	70.667	Cavia_aperea
ENSPMEG00000007591	SCAF8	84	57.895	ENSCPOG00000022216	-	86	57.940	Cavia_porcellus
ENSPMEG00000007591	SCAF8	84	59.226	ENSCPOG00000030311	-	54	55.114	Cavia_porcellus
ENSPMEG00000007591	SCAF8	84	68.129	ENSCCAG00000024952	SCAF8	85	69.297	Cebus_capucinus
ENSPMEG00000007591	SCAF8	84	68.129	ENSCATG00000035361	SCAF8	85	69.297	Cercocebus_atys
ENSPMEG00000007591	SCAF8	84	67.181	ENSCLAG00000004910	SCAF8	86	68.120	Chinchilla_lanigera
ENSPMEG00000007591	SCAF8	84	68.129	ENSCSAG00000013430	SCAF8	86	67.548	Chlorocebus_sabaeus
ENSPMEG00000007591	SCAF8	84	69.082	ENSCPBG00000016330	SCAF8	78	72.881	Chrysemys_picta_bellii
ENSPMEG00000007591	SCAF8	84	68.129	ENSCANG00000039499	SCAF8	85	69.039	Colobus_angolensis_palliatus
ENSPMEG00000007591	SCAF8	84	65.550	ENSCGRG00001020167	Scaf8	56	54.501	Cricetulus_griseus_chok1gshd
ENSPMEG00000007591	SCAF8	84	65.550	ENSCGRG00000004120	Scaf8	57	54.501	Cricetulus_griseus_crigri
ENSPMEG00000007591	SCAF8	100	74.221	ENSCSEG00000000043	-	100	73.461	Cynoglossus_semilaevis
ENSPMEG00000007591	SCAF8	93	88.394	ENSCVAG00000000925	SCAF8	99	85.138	Cyprinodon_variegatus
ENSPMEG00000007591	SCAF8	83	66.026	ENSDNOG00000025271	SCAF8	87	65.769	Dasypus_novemcinctus
ENSPMEG00000007591	SCAF8	84	68.863	ENSDORG00000006391	Scaf8	86	69.279	Dipodomys_ordii
ENSPMEG00000007591	SCAF8	84	68.645	ENSEASG00005018879	SCAF8	86	69.581	Equus_asinus_asinus
ENSPMEG00000007591	SCAF8	84	68.645	ENSECAG00000005540	SCAF8	86	69.790	Equus_caballus
ENSPMEG00000007591	SCAF8	82	69.897	ENSELUG00000002779	SCAF8	100	62.057	Esox_lucius
ENSPMEG00000007591	SCAF8	84	69.441	ENSFCAG00000023424	SCAF8	85	70.574	Felis_catus
ENSPMEG00000007591	SCAF8	84	67.829	ENSFDAG00000010335	SCAF8	91	68.148	Fukomys_damarensis
ENSPMEG00000007591	SCAF8	100	89.466	ENSFHEG00000008284	SCAF8	100	89.899	Fundulus_heteroclitus
ENSPMEG00000007591	SCAF8	70	76.796	ENSGMOG00000018812	SCAF8	83	77.754	Gadus_morhua
ENSPMEG00000007591	SCAF8	100	96.101	ENSGAFG00000018033	SCAF8	100	96.029	Gambusia_affinis
ENSPMEG00000007591	SCAF8	84	77.656	ENSGACG00000006909	SCAF8	99	77.956	Gasterosteus_aculeatus
ENSPMEG00000007591	SCAF8	84	68.258	ENSGGOG00000008645	SCAF8	85	69.297	Gorilla_gorilla
ENSPMEG00000007591	SCAF8	100	77.534	ENSHBUG00000019537	SCAF8	100	76.809	Haplochromis_burtoni
ENSPMEG00000007591	SCAF8	84	67.313	ENSHGLG00000003619	SCAF8	86	68.519	Heterocephalus_glaber_female
ENSPMEG00000007591	SCAF8	84	67.313	ENSHGLG00100004708	SCAF8	86	68.250	Heterocephalus_glaber_male
ENSPMEG00000007591	SCAF8	84	68.217	ENSSTOG00000026043	SCAF8	85	69.077	Ictidomys_tridecemlineatus
ENSPMEG00000007591	SCAF8	84	68.082	ENSJJAG00000020480	Scaf8	50	59.375	Jaculus_jaculus
ENSPMEG00000007591	SCAF8	100	82.727	ENSKMAG00000012767	SCAF8	100	82.512	Kryptolebias_marmoratus
ENSPMEG00000007591	SCAF8	83	95.149	ENSLBEG00000012484	-	92	92.282	Labrus_bergylta
ENSPMEG00000007591	SCAF8	50	50.155	ENSLACG00000001394	SCAF8	99	59.375	Latimeria_chalumnae
ENSPMEG00000007591	SCAF8	84	63.472	ENSLOCG00000016856	SCAF8	92	64.898	Lepisosteus_oculatus
ENSPMEG00000007591	SCAF8	84	68.211	ENSLAFG00000000022	SCAF8	86	68.966	Loxodonta_africana
ENSPMEG00000007591	SCAF8	84	68.129	ENSMFAG00000032738	SCAF8	85	69.297	Macaca_fascicularis
ENSPMEG00000007591	SCAF8	84	68.129	ENSMMUG00000015163	SCAF8	85	69.297	Macaca_mulatta
ENSPMEG00000007591	SCAF8	84	68.129	ENSMNEG00000043466	SCAF8	85	69.297	Macaca_nemestrina
ENSPMEG00000007591	SCAF8	84	68.258	ENSMLEG00000034845	SCAF8	85	69.164	Mandrillus_leucophaeus
ENSPMEG00000007591	SCAF8	91	82.302	ENSMAMG00000009457	SCAF8	100	75.128	Mastacembelus_armatus
ENSPMEG00000007591	SCAF8	100	77.463	ENSMZEG00005005698	SCAF8	100	76.738	Maylandia_zebra
ENSPMEG00000007591	SCAF8	50	58.974	ENSMGAG00000012762	SCAF8	93	68.974	Meleagris_gallopavo
ENSPMEG00000007591	SCAF8	84	65.789	ENSMAUG00000009513	Scaf8	57	54.988	Mesocricetus_auratus
ENSPMEG00000007591	SCAF8	84	64.952	ENSMICG00000028965	SCAF8	89	66.055	Microcebus_murinus
ENSPMEG00000007591	SCAF8	84	65.311	ENSMOCG00000014950	Scaf8	54	54.015	Microtus_ochrogaster
ENSPMEG00000007591	SCAF8	93	79.776	ENSMMOG00000002216	SCAF8	99	72.629	Mola_mola
ENSPMEG00000007591	SCAF8	50	60.458	ENSMODG00000008301	SCAF8	83	69.251	Monodelphis_domestica
ENSPMEG00000007591	SCAF8	100	78.187	ENSMALG00000011584	SCAF8	100	77.872	Monopterus_albus
ENSPMEG00000007591	SCAF8	84	64.833	MGP_CAROLIEiJ_G0021016	Scaf8	56	59.375	Mus_caroli
ENSPMEG00000007591	SCAF8	84	64.833	ENSMUSG00000046201	Scaf8	56	59.375	Mus_musculus
ENSPMEG00000007591	SCAF8	84	65.311	MGP_PahariEiJ_G0023334	Scaf8	56	59.659	Mus_pahari
ENSPMEG00000007591	SCAF8	84	68.129	ENSMPUG00000001974	SCAF8	86	67.548	Mustela_putorius_furo
ENSPMEG00000007591	SCAF8	84	64.713	ENSMLUG00000029190	SCAF8	90	68.765	Myotis_lucifugus
ENSPMEG00000007591	SCAF8	84	68.082	ENSNGAG00000012332	Scaf8	86	69.250	Nannospalax_galili
ENSPMEG00000007591	SCAF8	86	77.348	ENSNBRG00000009067	SCAF8	99	79.450	Neolamprologus_brichardi
ENSPMEG00000007591	SCAF8	83	67.585	ENSNLEG00000015509	SCAF8	85	66.872	Nomascus_leucogenys
ENSPMEG00000007591	SCAF8	59	90.741	ENSOPRG00000018413	-	67	90.741	Ochotona_princeps
ENSPMEG00000007591	SCAF8	84	67.613	ENSODEG00000007296	SCAF8	91	68.804	Octodon_degus
ENSPMEG00000007591	SCAF8	84	84.181	ENSONIG00000008119	SCAF8	98	81.604	Oreochromis_niloticus
ENSPMEG00000007591	SCAF8	84	68.346	ENSOCUG00000026063	SCAF8	85	69.202	Oryctolagus_cuniculus
ENSPMEG00000007591	SCAF8	100	76.400	ENSORLG00000017358	SCAF8	100	75.620	Oryzias_latipes
ENSPMEG00000007591	SCAF8	100	76.187	ENSORLG00020002214	SCAF8	100	75.408	Oryzias_latipes_hni
ENSPMEG00000007591	SCAF8	100	76.400	ENSORLG00015015779	SCAF8	100	76.187	Oryzias_latipes_hsok
ENSPMEG00000007591	SCAF8	100	78.023	ENSOMEG00000015471	SCAF8	100	77.809	Oryzias_melastigma
ENSPMEG00000007591	SCAF8	84	64.755	ENSOGAG00000034223	SCAF8	86	64.318	Otolemur_garnettii
ENSPMEG00000007591	SCAF8	84	68.509	ENSOARG00000004159	SCAF8	86	69.317	Ovis_aries
ENSPMEG00000007591	SCAF8	84	68.258	ENSPPAG00000039826	SCAF8	85	69.297	Pan_paniscus
ENSPMEG00000007591	SCAF8	84	68.774	ENSPPRG00000023175	SCAF8	85	70.037	Panthera_pardus
ENSPMEG00000007591	SCAF8	84	68.774	ENSPTIG00000014836	SCAF8	85	69.738	Panthera_tigris_altaica
ENSPMEG00000007591	SCAF8	84	68.129	ENSPTRG00000018727	SCAF8	85	69.297	Pan_troglodytes
ENSPMEG00000007591	SCAF8	84	68.129	ENSPANG00000017489	SCAF8	85	66.338	Papio_anubis
ENSPMEG00000007591	SCAF8	84	69.017	ENSPKIG00000021212	SCAF8	93	70.200	Paramormyrops_kingsleyae
ENSPMEG00000007591	SCAF8	84	64.952	ENSPEMG00000010531	Scaf8	54	53.528	Peromyscus_maniculatus_bairdii
ENSPMEG00000007591	SCAF8	50	59.599	ENSPCIG00000001141	SCAF8	56	59.312	Phascolarctos_cinereus
ENSPMEG00000007591	SCAF8	100	99.276	ENSPFOG00000004176	SCAF8	100	99.276	Poecilia_formosa
ENSPMEG00000007591	SCAF8	100	98.842	ENSPLAG00000021432	SCAF8	100	98.842	Poecilia_latipinna
ENSPMEG00000007591	SCAF8	100	98.480	ENSPREG00000000652	SCAF8	100	98.480	Poecilia_reticulata
ENSPMEG00000007591	SCAF8	83	67.235	ENSPPYG00000017121	SCAF8	85	67.774	Pongo_abelii
ENSPMEG00000007591	SCAF8	74	79.359	ENSPCAG00000013044	SCAF8	81	80.100	Procavia_capensis
ENSPMEG00000007591	SCAF8	84	65.072	ENSPCOG00000002067	SCAF8	88	66.009	Propithecus_coquereli
ENSPMEG00000007591	SCAF8	84	67.880	ENSPVAG00000005582	SCAF8	87	69.689	Pteropus_vampyrus
ENSPMEG00000007591	SCAF8	100	77.534	ENSPNYG00000007277	SCAF8	100	76.950	Pundamilia_nyererei
ENSPMEG00000007591	SCAF8	88	71.064	ENSPNAG00000024740	SCAF8	86	72.657	Pygocentrus_nattereri
ENSPMEG00000007591	SCAF8	84	64.833	ENSRNOG00000016919	Scaf8	57	58.807	Rattus_norvegicus
ENSPMEG00000007591	SCAF8	84	68.129	ENSRBIG00000035769	SCAF8	85	69.297	Rhinopithecus_bieti
ENSPMEG00000007591	SCAF8	84	68.129	ENSRROG00000013580	SCAF8	85	69.297	Rhinopithecus_roxellana
ENSPMEG00000007591	SCAF8	84	68.258	ENSSBOG00000027023	SCAF8	92	69.297	Saimiri_boliviensis_boliviensis
ENSPMEG00000007591	SCAF8	84	68.605	ENSSHAG00000009915	SCAF8	86	69.630	Sarcophilus_harrisii
ENSPMEG00000007591	SCAF8	84	63.767	ENSSFOG00015009481	SCAF8	56	55.325	Scleropages_formosus
ENSPMEG00000007591	SCAF8	84	83.365	ENSSMAG00000008275	SCAF8	100	75.693	Scophthalmus_maximus
ENSPMEG00000007591	SCAF8	84	68.961	ENSSPUG00000015219	SCAF8	76	76.506	Sphenodon_punctatus
ENSPMEG00000007591	SCAF8	58	78.610	ENSSPAG00000019433	SCAF8	52	78.386	Stegastes_partitus
ENSPMEG00000007591	SCAF8	84	68.516	ENSSSCG00000004070	SCAF8	86	69.667	Sus_scrofa
ENSPMEG00000007591	SCAF8	50	59.130	ENSTGUG00000011151	SCAF8	93	69.762	Taeniopygia_guttata
ENSPMEG00000007591	SCAF8	100	72.516	ENSTRUG00000009243	SCAF8	100	71.580	Takifugu_rubripes
ENSPMEG00000007591	SCAF8	84	77.103	ENSTNIG00000016885	SCAF8	99	78.336	Tetraodon_nigroviridis
ENSPMEG00000007591	SCAF8	84	68.516	ENSTTRG00000014538	SCAF8	86	68.165	Tursiops_truncatus
ENSPMEG00000007591	SCAF8	84	68.557	ENSUAMG00000024736	SCAF8	85	69.576	Ursus_americanus
ENSPMEG00000007591	SCAF8	84	68.557	ENSUMAG00000013404	SCAF8	85	69.377	Ursus_maritimus
ENSPMEG00000007591	SCAF8	62	60.489	ENSVPAG00000012465	SCAF8	84	86.036	Vicugna_pacos
ENSPMEG00000007591	SCAF8	84	68.516	ENSVVUG00000007532	SCAF8	86	69.211	Vulpes_vulpes
ENSPMEG00000007591	SCAF8	77	71.037	ENSXETG00000013132	scaf8	75	70.075	Xenopus_tropicalis
ENSPMEG00000007591	SCAF8	100	97.250	ENSXMAG00000019192	SCAF8	100	97.250	Xiphophorus_maculatus