EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000007643 (Gene tree)
Gene ID: 106904013
Gene Symbol: synj1
Alias: -
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 37704 bases
Position: chrKQ552867.1:18019-55722
Accession: 106904013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000006178	Exo_endo_phos	PF03372.23	5.7e-14	1	1
ENSPMEP00000006173	Exo_endo_phos	PF03372.23	5.7e-14	1	1
ENSPMEP00000006186	Exo_endo_phos	PF03372.23	5.8e-14	1	1
ENSPMEP00000006173	DUF1866	PF08952.11	1e-55	1	1
ENSPMEP00000006178	DUF1866	PF08952.11	1e-55	1	1
ENSPMEP00000006186	DUF1866	PF08952.11	1.1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000006274	-	8646	-	ENSPMEP00000006173	1628 (aa)	-	-
ENSPMET00000006270	-	8679	XM_014968077	ENSPMEP00000006178	1639 (aa)	XP_014823563	-
ENSPMET00000006258	-	8724	-	ENSPMEP00000006186	1654 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000007643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000007643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000007643	synj1	89	65.646	ENSG00000159082	SYNJ1	100	82.353	Homo_sapiens
ENSPMEG00000007643	synj1	74	91.729	ENSAPOG00000002809	synj1	99	84.941	Acanthochromis_polyacanthus
ENSPMEG00000007643	synj1	89	62.698	ENSAMEG00000015028	SYNJ1	83	64.530	Ailuropoda_melanoleuca
ENSPMEG00000007643	synj1	99	78.641	ENSACIG00000008857	synj1	98	85.693	Amphilophus_citrinellus
ENSPMEG00000007643	synj1	99	83.722	ENSAOCG00000009835	synj1	98	87.788	Amphiprion_ocellaris
ENSPMEG00000007643	synj1	99	83.854	ENSAPEG00000021010	synj1	99	83.733	Amphiprion_percula
ENSPMEG00000007643	synj1	100	83.284	ENSATEG00000002306	synj1	99	82.018	Anabas_testudineus
ENSPMEG00000007643	synj1	90	60.955	ENSAPLG00000011832	SYNJ1	85	63.649	Anas_platyrhynchos
ENSPMEG00000007643	synj1	77	68.117	ENSACAG00000003006	-	84	76.169	Anolis_carolinensis
ENSPMEG00000007643	synj1	89	62.832	ENSANAG00000027325	SYNJ1	99	67.354	Aotus_nancymaae
ENSPMEG00000007643	synj1	100	83.852	ENSACLG00000002255	synj1	99	85.489	Astatotilapia_calliptera
ENSPMEG00000007643	synj1	99	74.970	ENSAMXG00000008208	synj1	98	75.075	Astyanax_mexicanus
ENSPMEG00000007643	synj1	89	65.217	ENSBTAG00000003063	SYNJ1	99	65.094	Bos_taurus
ENSPMEG00000007643	synj1	90	64.186	ENSCJAG00000009187	SYNJ1	99	66.395	Callithrix_jacchus
ENSPMEG00000007643	synj1	89	62.869	ENSCAFG00000009041	SYNJ1	99	67.638	Canis_familiaris
ENSPMEG00000007643	synj1	92	75.783	ENSCAFG00020025776	SYNJ1	83	75.783	Canis_lupus_dingo
ENSPMEG00000007643	synj1	89	65.915	ENSCHIG00000005095	SYNJ1	86	65.309	Capra_hircus
ENSPMEG00000007643	synj1	97	57.974	ENSTSYG00000014541	SYNJ1	99	67.011	Carlito_syrichta
ENSPMEG00000007643	synj1	74	73.282	ENSCAPG00000014483	SYNJ1	75	73.282	Cavia_aperea
ENSPMEG00000007643	synj1	97	58.185	ENSCPOG00000012182	SYNJ1	99	65.449	Cavia_porcellus
ENSPMEG00000007643	synj1	89	64.678	ENSCCAG00000020825	SYNJ1	99	67.282	Cebus_capucinus
ENSPMEG00000007643	synj1	89	64.256	ENSCATG00000033891	SYNJ1	99	69.208	Cercocebus_atys
ENSPMEG00000007643	synj1	89	62.222	ENSCLAG00000009796	SYNJ1	100	81.871	Chinchilla_lanigera
ENSPMEG00000007643	synj1	76	67.487	ENSCSAG00000009654	SYNJ1	99	65.284	Chlorocebus_sabaeus
ENSPMEG00000007643	synj1	74	71.776	ENSCHOG00000012390	SYNJ1	54	71.776	Choloepus_hoffmanni
ENSPMEG00000007643	synj1	73	71.452	ENSCPBG00000006402	SYNJ1	96	70.113	Chrysemys_picta_bellii
ENSPMEG00000007643	synj1	89	65.646	ENSCANG00000031359	SYNJ1	99	65.660	Colobus_angolensis_palliatus
ENSPMEG00000007643	synj1	79	67.290	ENSCGRG00001010861	Synj1	99	65.106	Cricetulus_griseus_chok1gshd
ENSPMEG00000007643	synj1	79	67.290	ENSCGRG00000015749	Synj1	100	81.727	Cricetulus_griseus_crigri
ENSPMEG00000007643	synj1	77	85.930	ENSCSEG00000019614	synj1	97	88.801	Cynoglossus_semilaevis
ENSPMEG00000007643	synj1	95	89.771	ENSCVAG00000019250	synj1	99	92.793	Cyprinodon_variegatus
ENSPMEG00000007643	synj1	81	81.581	ENSDARG00000025011	synj1	100	82.116	Danio_rerio
ENSPMEG00000007643	synj1	89	61.621	ENSDNOG00000010732	SYNJ1	85	61.582	Dasypus_novemcinctus
ENSPMEG00000007643	synj1	68	77.778	ENSETEG00000018674	SYNJ1	59	77.778	Echinops_telfairi
ENSPMEG00000007643	synj1	89	66.008	ENSEASG00005006287	SYNJ1	98	77.477	Equus_asinus_asinus
ENSPMEG00000007643	synj1	89	65.940	ENSECAG00000004829	SYNJ1	99	67.836	Equus_caballus
ENSPMEG00000007643	synj1	90	70.280	ENSEEUG00000005150	SYNJ1	81	70.280	Erinaceus_europaeus
ENSPMEG00000007643	synj1	100	69.797	ENSELUG00000009731	synj1	99	67.881	Esox_lucius
ENSPMEG00000007643	synj1	89	65.140	ENSFCAG00000012498	SYNJ1	99	65.169	Felis_catus
ENSPMEG00000007643	synj1	75	52.445	ENSFALG00000004680	SYNJ1	80	56.632	Ficedula_albicollis
ENSPMEG00000007643	synj1	77	66.943	ENSFDAG00000016818	SYNJ1	100	81.727	Fukomys_damarensis
ENSPMEG00000007643	synj1	99	87.280	ENSFHEG00000017689	synj1	99	87.523	Fundulus_heteroclitus
ENSPMEG00000007643	synj1	64	84.539	ENSGMOG00000014852	synj1	82	84.427	Gadus_morhua
ENSPMEG00000007643	synj1	93	61.662	ENSGALG00000034317	SYNJ1	83	66.715	Gallus_gallus
ENSPMEG00000007643	synj1	100	92.901	ENSGAFG00000019466	synj1	100	94.186	Gambusia_affinis
ENSPMEG00000007643	synj1	81	80.430	ENSGACG00000020575	synj1	99	83.008	Gasterosteus_aculeatus
ENSPMEG00000007643	synj1	96	61.774	ENSGAGG00000022523	SYNJ1	99	68.741	Gopherus_agassizii
ENSPMEG00000007643	synj1	89	63.600	ENSGGOG00000015945	SYNJ1	99	69.358	Gorilla_gorilla
ENSPMEG00000007643	synj1	100	83.852	ENSHBUG00000007774	synj1	99	85.577	Haplochromis_burtoni
ENSPMEG00000007643	synj1	89	61.804	ENSHGLG00000006420	SYNJ1	100	81.439	Heterocephalus_glaber_female
ENSPMEG00000007643	synj1	89	63.356	ENSHGLG00100012591	SYNJ1	100	81.439	Heterocephalus_glaber_male
ENSPMEG00000007643	synj1	80	76.422	ENSHCOG00000012774	synj1	96	76.988	Hippocampus_comes
ENSPMEG00000007643	synj1	97	73.000	ENSIPUG00000010691	SYNJ1	99	73.035	Ictalurus_punctatus
ENSPMEG00000007643	synj1	97	61.684	ENSSTOG00000015806	SYNJ1	99	65.252	Ictidomys_tridecemlineatus
ENSPMEG00000007643	synj1	89	60.175	ENSJJAG00000020168	Synj1	84	60.299	Jaculus_jaculus
ENSPMEG00000007643	synj1	100	79.539	ENSKMAG00000004221	synj1	93	86.059	Kryptolebias_marmoratus
ENSPMEG00000007643	synj1	91	83.233	ENSLBEG00000015081	synj1	98	85.146	Labrus_bergylta
ENSPMEG00000007643	synj1	87	74.237	ENSLACG00000005928	SYNJ1	70	74.552	Latimeria_chalumnae
ENSPMEG00000007643	synj1	96	64.390	ENSLOCG00000009230	synj1	100	61.842	Lepisosteus_oculatus
ENSPMEG00000007643	synj1	96	62.711	ENSLAFG00000011806	SYNJ1	69	74.955	Loxodonta_africana
ENSPMEG00000007643	synj1	87	63.787	ENSMFAG00000018883	SYNJ1	99	64.499	Macaca_fascicularis
ENSPMEG00000007643	synj1	89	62.802	ENSMMUG00000004624	SYNJ1	99	65.500	Macaca_mulatta
ENSPMEG00000007643	synj1	89	65.309	ENSMNEG00000040077	SYNJ1	94	65.646	Macaca_nemestrina
ENSPMEG00000007643	synj1	89	65.241	ENSMLEG00000037029	SYNJ1	99	65.636	Mandrillus_leucophaeus
ENSPMEG00000007643	synj1	100	83.254	ENSMAMG00000013404	synj1	99	82.738	Mastacembelus_armatus
ENSPMEG00000007643	synj1	100	83.022	ENSMZEG00005024358	synj1	99	87.500	Maylandia_zebra
ENSPMEG00000007643	synj1	93	59.548	ENSMGAG00000014522	SYNJ1	84	63.867	Meleagris_gallopavo
ENSPMEG00000007643	synj1	79	65.405	ENSMAUG00000009743	Synj1	100	81.439	Mesocricetus_auratus
ENSPMEG00000007643	synj1	89	64.963	ENSMICG00000034953	SYNJ1	99	69.615	Microcebus_murinus
ENSPMEG00000007643	synj1	81	81.571	ENSMMOG00000010203	synj1	98	83.333	Mola_mola
ENSPMEG00000007643	synj1	71	66.041	ENSMODG00000021073	SYNJ1	83	71.403	Monodelphis_domestica
ENSPMEG00000007643	synj1	100	82.700	ENSMALG00000014015	synj1	99	82.580	Monopterus_albus
ENSPMEG00000007643	synj1	89	61.391	MGP_CAROLIEiJ_G0020951	Synj1	100	81.727	Mus_caroli
ENSPMEG00000007643	synj1	89	61.772	ENSMUSG00000022973	Synj1	100	81.727	Mus_musculus
ENSPMEG00000007643	synj1	89	61.442	MGP_PahariEiJ_G0016656	Synj1	100	81.727	Mus_pahari
ENSPMEG00000007643	synj1	89	61.921	MGP_SPRETEiJ_G0021857	Synj1	100	81.871	Mus_spretus
ENSPMEG00000007643	synj1	89	62.360	ENSMPUG00000001153	SYNJ1	85	63.949	Mustela_putorius_furo
ENSPMEG00000007643	synj1	56	57.516	ENSMLUG00000005764	-	78	56.713	Myotis_lucifugus
ENSPMEG00000007643	synj1	79	65.731	ENSNGAG00000000453	Synj1	100	81.727	Nannospalax_galili
ENSPMEG00000007643	synj1	100	77.082	ENSNBRG00000011936	synj1	99	82.240	Neolamprologus_brichardi
ENSPMEG00000007643	synj1	77	61.456	ENSNLEG00000003734	SYNJ1	98	63.188	Nomascus_leucogenys
ENSPMEG00000007643	synj1	59	64.735	ENSMEUG00000004158	-	72	61.006	Notamacropus_eugenii
ENSPMEG00000007643	synj1	89	77.007	ENSOPRG00000013602	SYNJ1	77	77.007	Ochotona_princeps
ENSPMEG00000007643	synj1	89	79.310	ENSONIG00000004667	synj1	78	91.031	Oreochromis_niloticus
ENSPMEG00000007643	synj1	73	65.902	ENSOANG00000006929	SYNJ1	82	64.777	Ornithorhynchus_anatinus
ENSPMEG00000007643	synj1	97	57.690	ENSOCUG00000001420	SYNJ1	84	63.946	Oryctolagus_cuniculus
ENSPMEG00000007643	synj1	99	81.746	ENSORLG00000004320	synj1	99	85.230	Oryzias_latipes
ENSPMEG00000007643	synj1	81	83.910	ENSORLG00020011994	synj1	97	81.968	Oryzias_latipes_hni
ENSPMEG00000007643	synj1	99	81.288	ENSORLG00015018077	synj1	96	81.634	Oryzias_latipes_hsok
ENSPMEG00000007643	synj1	98	81.126	ENSOMEG00000014322	synj1	99	86.340	Oryzias_melastigma
ENSPMEG00000007643	synj1	89	60.347	ENSOGAG00000006010	SYNJ1	83	62.179	Otolemur_garnettii
ENSPMEG00000007643	synj1	89	62.196	ENSOARG00000013414	SYNJ1	87	59.729	Ovis_aries
ENSPMEG00000007643	synj1	89	65.714	ENSPPAG00000026784	SYNJ1	99	67.618	Pan_paniscus
ENSPMEG00000007643	synj1	89	65.072	ENSPPRG00000023469	SYNJ1	99	65.464	Panthera_pardus
ENSPMEG00000007643	synj1	89	65.140	ENSPTIG00000007930	SYNJ1	99	65.538	Panthera_tigris_altaica
ENSPMEG00000007643	synj1	89	65.714	ENSPTRG00000048135	-	99	69.358	Pan_troglodytes
ENSPMEG00000007643	synj1	89	63.734	ENSPTRG00000023787	SYNJ1	99	69.358	Pan_troglodytes
ENSPMEG00000007643	synj1	89	64.861	ENSPANG00000022531	SYNJ1	99	65.716	Papio_anubis
ENSPMEG00000007643	synj1	68	83.633	ENSPKIG00000022603	synj1	89	83.633	Paramormyrops_kingsleyae
ENSPMEG00000007643	synj1	95	86.661	ENSPMGG00000016831	synj1	98	87.666	Periophthalmus_magnuspinnatus
ENSPMEG00000007643	synj1	79	66.442	ENSPEMG00000018767	Synj1	100	82.014	Peromyscus_maniculatus_bairdii
ENSPMEG00000007643	synj1	80	50.593	ENSPMAG00000002887	synj1	98	50.147	Petromyzon_marinus
ENSPMEG00000007643	synj1	89	63.556	ENSPCIG00000016372	SYNJ1	85	73.901	Phascolarctos_cinereus
ENSPMEG00000007643	synj1	81	98.941	ENSPFOG00000016886	synj1	100	98.941	Poecilia_formosa
ENSPMEG00000007643	synj1	100	98.782	ENSPLAG00000017559	synj1	100	98.782	Poecilia_latipinna
ENSPMEG00000007643	synj1	100	96.265	ENSPREG00000012412	synj1	100	96.265	Poecilia_reticulata
ENSPMEG00000007643	synj1	82	64.910	ENSPPYG00000011365	SYNJ1	96	64.463	Pongo_abelii
ENSPMEG00000007643	synj1	65	81.429	ENSPCAG00000009906	SYNJ1	58	81.429	Procavia_capensis
ENSPMEG00000007643	synj1	82	76.382	ENSPCOG00000024841	SYNJ1	96	60.320	Propithecus_coquereli
ENSPMEG00000007643	synj1	89	59.321	ENSPVAG00000000892	SYNJ1	82	62.665	Pteropus_vampyrus
ENSPMEG00000007643	synj1	100	78.285	ENSPNYG00000022989	synj1	99	87.099	Pundamilia_nyererei
ENSPMEG00000007643	synj1	68	87.647	ENSPNAG00000021119	synj1	91	87.007	Pygocentrus_nattereri
ENSPMEG00000007643	synj1	89	61.854	ENSRNOG00000002051	Synj1	85	74.955	Rattus_norvegicus
ENSPMEG00000007643	synj1	96	62.210	ENSRBIG00000034477	SYNJ1	99	66.865	Rhinopithecus_bieti
ENSPMEG00000007643	synj1	97	63.365	ENSRROG00000039256	SYNJ1	99	65.660	Rhinopithecus_roxellana
ENSPMEG00000007643	synj1	89	64.969	ENSSBOG00000021001	SYNJ1	99	67.330	Saimiri_boliviensis_boliviensis
ENSPMEG00000007643	synj1	89	62.373	ENSSHAG00000008538	SYNJ1	76	71.405	Sarcophilus_harrisii
ENSPMEG00000007643	synj1	98	74.644	ENSSFOG00015006095	synj1	97	74.148	Scleropages_formosus
ENSPMEG00000007643	synj1	100	78.554	ENSSMAG00000018066	synj1	97	86.999	Scophthalmus_maximus
ENSPMEG00000007643	synj1	100	83.998	ENSSDUG00000013058	synj1	99	84.420	Seriola_dumerili
ENSPMEG00000007643	synj1	100	84.150	ENSSLDG00000021406	synj1	99	88.855	Seriola_lalandi_dorsalis
ENSPMEG00000007643	synj1	89	63.450	ENSSPUG00000012552	SYNJ1	84	66.322	Sphenodon_punctatus
ENSPMEG00000007643	synj1	96	83.865	ENSSPAG00000006812	SYNJ1	99	83.875	Stegastes_partitus
ENSPMEG00000007643	synj1	100	86.174	ENSSPAG00000017029	synj1	98	88.648	Stegastes_partitus
ENSPMEG00000007643	synj1	89	64.634	ENSSSCG00000012035	SYNJ1	99	64.104	Sus_scrofa
ENSPMEG00000007643	synj1	93	80.528	ENSTRUG00000006907	synj1	97	82.194	Takifugu_rubripes
ENSPMEG00000007643	synj1	88	72.739	ENSTNIG00000009940	synj1	99	77.850	Tetraodon_nigroviridis
ENSPMEG00000007643	synj1	86	83.544	ENSTBEG00000016298	SYNJ1	61	83.544	Tupaia_belangeri
ENSPMEG00000007643	synj1	97	54.479	ENSTTRG00000002222	SYNJ1	85	58.803	Tursiops_truncatus
ENSPMEG00000007643	synj1	89	66.324	ENSUAMG00000018606	SYNJ1	99	78.668	Ursus_americanus
ENSPMEG00000007643	synj1	84	76.509	ENSUMAG00000018419	SYNJ1	99	79.031	Ursus_maritimus
ENSPMEG00000007643	synj1	79	81.429	ENSVPAG00000001241	SYNJ1	59	81.429	Vicugna_pacos
ENSPMEG00000007643	synj1	89	63.293	ENSVVUG00000023125	SYNJ1	99	65.227	Vulpes_vulpes
ENSPMEG00000007643	synj1	96	57.853	ENSXETG00000009899	synj1	86	62.360	Xenopus_tropicalis
ENSPMEG00000007643	synj1	80	93.971	ENSXCOG00000011896	synj1	99	94.149	Xiphophorus_couchianus
ENSPMEG00000007643	synj1	100	94.196	ENSXMAG00000017524	synj1	99	96.351	Xiphophorus_maculatus