EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000007677 (Gene tree)
Gene ID
106907348
Gene Symbol
pabpc1l
Alias
-
Full Name
embryonic polyadenylate-binding protein-like
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Minus strand
Length
11301 bases
Position
chrKQ553533.1:61783-73083
Accession
106907348
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000024983PABPPF00658.187.6e-2911
ENSPMEP00000024995PABPPF00658.188.1e-2911
ENSPMEP00000024995RRM_5PF13893.62.3e-1012
ENSPMEP00000024995RRM_5PF13893.62.3e-1022
ENSPMEP00000024983RRM_5PF13893.61.1e-0912
ENSPMEP00000024983RRM_5PF13893.61.1e-0922
ENSPMEP00000024995RRM_1PF00076.229.7e-9014
ENSPMEP00000024995RRM_1PF00076.229.7e-9024
ENSPMEP00000024995RRM_1PF00076.229.7e-9034
ENSPMEP00000024995RRM_1PF00076.229.7e-9044
ENSPMEP00000024983RRM_1PF00076.221.2e-8914
ENSPMEP00000024983RRM_1PF00076.221.2e-8924
ENSPMEP00000024983RRM_1PF00076.221.2e-8934
ENSPMEP00000024983RRM_1PF00076.221.2e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000006192-2184XM_014973002ENSPMEP00000024995649 (aa)XP_014828488UPI00072DD573
ENSPMET00000006211-2088XM_014973004ENSPMEP00000024983617 (aa)XP_014828490UPI00072EB1F9
Gene Model
Click here to download ENSPMEG00000007677's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000007677's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000007677pabpc1l10065.728ENSPMEG00000019739pabpc49868.051
ENSPMEG00000007677pabpc1l53100.000ENSPMEG00000009185-88100.000
ENSPMEG00000007677pabpc1l6030.435ENSPMEG00000013469tia1l7030.435
ENSPMEG00000007677pabpc1l5134.247ENSPMEG00000023690celf3b6434.247
ENSPMEG00000007677pabpc1l6131.395ENSPMEG00000006938tial18332.283
ENSPMEG00000007677pabpc1l6035.955ENSPMEG00000002868elavl1a8837.079
ENSPMEG00000007677pabpc1l6230.622ENSPMEG00000021929ELAVL28530.622
ENSPMEG00000007677pabpc1l6037.333ENSPMEG00000018585rbm196037.333
ENSPMEG00000007677pabpc1l5434.884ENSPMEG00000007082-5634.884
ENSPMEG00000007677pabpc1l9969.702ENSPMEG00000014399pabpc1b9869.735
ENSPMEG00000007677pabpc1l9970.253ENSPMEG00000001334pabpc1a9870.253
ENSPMEG00000007677pabpc1l6033.766ENSPMEG00000000283ELAVL19831.522
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000007677pabpc1l9968.943ENSG00000101104PABPC1L9875.926Homo_sapiens
ENSPMEG00000007677pabpc1l9982.770ENSAPOG00000010842pabpc1l9982.770Acanthochromis_polyacanthus
ENSPMEG00000007677pabpc1l9964.462ENSAMEG00000004099PABPC1L10063.748Ailuropoda_melanoleuca
ENSPMEG00000007677pabpc1l10088.000ENSACIG00000021004-10091.924Amphilophus_citrinellus
ENSPMEG00000007677pabpc1l10084.824ENSAOCG00000006167-10084.824Amphiprion_ocellaris
ENSPMEG00000007677pabpc1l10083.387ENSAPEG00000010558-9989.450Amphiprion_percula
ENSPMEG00000007677pabpc1l10086.603ENSATEG00000007428pabpc1l10087.400Anabas_testudineus
ENSPMEG00000007677pabpc1l9871.659ENSAPLG00000008415PABPC1L9971.611Anas_platyrhynchos
ENSPMEG00000007677pabpc1l9973.659ENSACAG00000011841PABPC1L9973.659Anolis_carolinensis
ENSPMEG00000007677pabpc1l9968.831ENSANAG00000026826PABPC1L9968.831Aotus_nancymaae
ENSPMEG00000007677pabpc1l10088.818ENSACLG00000024791pabpc1l10088.818Astatotilapia_calliptera
ENSPMEG00000007677pabpc1l10080.445ENSAMXG00000013552pabpc1l10080.445Astyanax_mexicanus
ENSPMEG00000007677pabpc1l6465.185ENSBTAG00000016849PABPC1L8364.364Bos_taurus
ENSPMEG00000007677pabpc1l6487.500ENSBTAG00000055300-10087.500Bos_taurus
ENSPMEG00000007677pabpc1l5980.460ENSCJAG00000038506-10080.460Callithrix_jacchus
ENSPMEG00000007677pabpc1l9968.994ENSCJAG00000017628PABPC1L9968.994Callithrix_jacchus
ENSPMEG00000007677pabpc1l9964.352ENSCAFG00000009573PABPC1L10064.352Canis_familiaris
ENSPMEG00000007677pabpc1l9969.368ENSCAFG00020013828PABPC1L9969.368Canis_lupus_dingo
ENSPMEG00000007677pabpc1l9869.079ENSCHIG00000025759PABPC1L9169.079Capra_hircus
ENSPMEG00000007677pabpc1l9967.955ENSTSYG00000006645PABPC1L9967.955Carlito_syrichta
ENSPMEG00000007677pabpc1l9863.254ENSCAPG00000014519PABPC1L9963.254Cavia_aperea
ENSPMEG00000007677pabpc1l9965.751ENSCPOG00000013633PABPC1L9965.751Cavia_porcellus
ENSPMEG00000007677pabpc1l9968.344ENSCCAG00000023338PABPC1L9968.994Cebus_capucinus
ENSPMEG00000007677pabpc1l9969.106ENSCATG00000034065PABPC1L9969.481Cercocebus_atys
ENSPMEG00000007677pabpc1l9964.573ENSCLAG00000005298PABPC1L9965.217Chinchilla_lanigera
ENSPMEG00000007677pabpc1l9968.943ENSCSAG00000014242PABPC1L9969.318Chlorocebus_sabaeus
ENSPMEG00000007677pabpc1l7180.045ENSCPBG00000017755-9980.045Chrysemys_picta_bellii
ENSPMEG00000007677pabpc1l5589.916ENSCPBG00000007810-8189.916Chrysemys_picta_bellii
ENSPMEG00000007677pabpc1l8449.495ENSCING00000002796-9749.603Ciona_intestinalis
ENSPMEG00000007677pabpc1l9957.323ENSCSAVG00000003102-10083.893Ciona_savignyi
ENSPMEG00000007677pabpc1l9960.645ENSCSAVG00000004246-8971.523Ciona_savignyi
ENSPMEG00000007677pabpc1l9965.920ENSCANG00000037530PABPC1L9966.294Colobus_angolensis_palliatus
ENSPMEG00000007677pabpc1l9961.502ENSCGRG00001021938Pabpc1l9961.997Cricetulus_griseus_chok1gshd
ENSPMEG00000007677pabpc1l9961.502ENSCGRG00000007946Pabpc1l9961.997Cricetulus_griseus_crigri
ENSPMEG00000007677pabpc1l9976.873ENSCSEG00000021295pabpc1l9976.873Cynoglossus_semilaevis
ENSPMEG00000007677pabpc1l10091.922ENSCVAG00000015943-9996.947Cyprinodon_variegatus
ENSPMEG00000007677pabpc1l9978.914ENSDARG00000002597pabpc1l8895.385Danio_rerio
ENSPMEG00000007677pabpc1l9968.530ENSDNOG00000048450PABPC1L9968.530Dasypus_novemcinctus
ENSPMEG00000007677pabpc1l9965.545ENSDORG00000001067Pabpc1l9965.545Dipodomys_ordii
ENSPMEG00000007677pabpc1l9576.423ENSETEG00000009969PABPC1L7276.423Echinops_telfairi
ENSPMEG00000007677pabpc1l5174.684ENSEASG00005023407-6474.684Equus_asinus_asinus
ENSPMEG00000007677pabpc1l6485.119ENSEASG00005023408-10085.119Equus_asinus_asinus
ENSPMEG00000007677pabpc1l7063.525ENSECAG00000040139-8863.525Equus_caballus
ENSPMEG00000007677pabpc1l9966.124ENSEEUG00000005978PABPC1L9966.124Erinaceus_europaeus
ENSPMEG00000007677pabpc1l10080.922ENSELUG00000001811pabpc1l10080.922Esox_lucius
ENSPMEG00000007677pabpc1l9969.169ENSFCAG00000011692PABPC1L9969.169Felis_catus
ENSPMEG00000007677pabpc1l8671.481ENSFALG00000005372PABPC1L9768.675Ficedula_albicollis
ENSPMEG00000007677pabpc1l9965.154ENSFDAG00000008291PABPC1L9965.478Fukomys_damarensis
ENSPMEG00000007677pabpc1l10093.548ENSFHEG00000003398pabpc1l10093.548Fundulus_heteroclitus
ENSPMEG00000007677pabpc1l9982.476ENSGMOG00000004437pabpc1l9982.476Gadus_morhua
ENSPMEG00000007677pabpc1l8678.333ENSGALG00000004123PABPC1L9980.523Gallus_gallus
ENSPMEG00000007677pabpc1l10097.389ENSGAFG00000021057pabpc1l10097.389Gambusia_affinis
ENSPMEG00000007677pabpc1l9986.795ENSGACG00000002792pabpc1l10086.795Gasterosteus_aculeatus
ENSPMEG00000007677pabpc1l9973.726ENSGAGG00000000589PABPC1L9580.435Gopherus_agassizii
ENSPMEG00000007677pabpc1l9968.943ENSGGOG00000004584PABPC1L9969.318Gorilla_gorilla
ENSPMEG00000007677pabpc1l10088.658ENSHBUG00000006134pabpc1l10088.658Haplochromis_burtoni
ENSPMEG00000007677pabpc1l9966.236ENSHGLG00000008434PABPC1L9966.559Heterocephalus_glaber_female
ENSPMEG00000007677pabpc1l5986.517ENSHGLG00100019506-10086.905Heterocephalus_glaber_male
ENSPMEG00000007677pabpc1l9966.236ENSHGLG00100012151PABPC1L9966.559Heterocephalus_glaber_male
ENSPMEG00000007677pabpc1l9985.025ENSHCOG00000009270pabpc1l10085.025Hippocampus_comes
ENSPMEG00000007677pabpc1l5962.644ENSIPUG00000006760-8862.644Ictalurus_punctatus
ENSPMEG00000007677pabpc1l10079.459ENSIPUG00000012602pabpc1l10079.459Ictalurus_punctatus
ENSPMEG00000007677pabpc1l5962.644ENSIPUG00000006780-8562.644Ictalurus_punctatus
ENSPMEG00000007677pabpc1l9968.182ENSSTOG00000003739PABPC1L9968.182Ictidomys_tridecemlineatus
ENSPMEG00000007677pabpc1l9952.113ENSJJAG00000022406Pabpc1l9950.791Jaculus_jaculus
ENSPMEG00000007677pabpc1l10088.640ENSKMAG00000016847pabpc1l10088.640Kryptolebias_marmoratus
ENSPMEG00000007677pabpc1l10087.700ENSLBEG00000010084pabpc1l10087.700Labrus_bergylta
ENSPMEG00000007677pabpc1l9971.763ENSLACG00000005762PABPC1L9575.810Latimeria_chalumnae
ENSPMEG00000007677pabpc1l9980.159ENSLOCG00000007519pabpc1l9980.159Lepisosteus_oculatus
ENSPMEG00000007677pabpc1l9967.143ENSLAFG00000003553PABPC1L10067.143Loxodonta_africana
ENSPMEG00000007677pabpc1l9968.480ENSMFAG00000040365PABPC1L9968.850Macaca_fascicularis
ENSPMEG00000007677pabpc1l9968.293ENSMNEG00000032298PABPC1L9968.669Macaca_nemestrina
ENSPMEG00000007677pabpc1l9969.106ENSMLEG00000043139PABPC1L9969.481Mandrillus_leucophaeus
ENSPMEG00000007677pabpc1l9788.119ENSMAMG00000011854pabpc1l9788.119Mastacembelus_armatus
ENSPMEG00000007677pabpc1l10088.818ENSMZEG00005023713pabpc1l10088.818Maylandia_zebra
ENSPMEG00000007677pabpc1l9972.727ENSMGAG00000003674PABPC1L9972.727Meleagris_gallopavo
ENSPMEG00000007677pabpc1l9960.772ENSMOCG00000013186Pabpc1l9960.772Microtus_ochrogaster
ENSPMEG00000007677pabpc1l9986.196ENSMMOG00000020574-9096.154Mola_mola
ENSPMEG00000007677pabpc1l9770.358ENSMODG00000016198PABPC1L9970.358Monodelphis_domestica
ENSPMEG00000007677pabpc1l9787.273ENSMALG00000021622pabpc1l10087.273Monopterus_albus
ENSPMEG00000007677pabpc1l9961.477MGP_CAROLIEiJ_G0024627Pabpc1l9961.798Mus_caroli
ENSPMEG00000007677pabpc1l9961.477ENSMUSG00000054582Pabpc1l9961.798Mus_musculus
ENSPMEG00000007677pabpc1l10062.179MGP_PahariEiJ_G0026071Pabpc1l10062.179Mus_pahari
ENSPMEG00000007677pabpc1l9961.477MGP_SPRETEiJ_G0025549Pabpc1l9961.798Mus_spretus
ENSPMEG00000007677pabpc1l9968.850ENSMPUG00000017646PABPC1L9968.850Mustela_putorius_furo
ENSPMEG00000007677pabpc1l9867.150ENSMLUG00000006324PABPC1L9867.150Myotis_lucifugus
ENSPMEG00000007677pabpc1l9963.107ENSNGAG00000010458Pabpc1l9963.107Nannospalax_galili
ENSPMEG00000007677pabpc1l10088.462ENSNBRG00000016633pabpc1l10093.976Neolamprologus_brichardi
ENSPMEG00000007677pabpc1l9065.647ENSMEUG00000007905-8965.647Notamacropus_eugenii
ENSPMEG00000007677pabpc1l9967.851ENSOPRG00000011846PABPC1L9967.851Ochotona_princeps
ENSPMEG00000007677pabpc1l6080.625ENSODEG00000002920-9780.625Octodon_degus
ENSPMEG00000007677pabpc1l9961.238ENSODEG00000015482PABPC1L9961.238Octodon_degus
ENSPMEG00000007677pabpc1l10088.818ENSONIG00000017314pabpc1l10088.818Oreochromis_niloticus
ENSPMEG00000007677pabpc1l9062.745ENSOANG00000015793-10062.745Ornithorhynchus_anatinus
ENSPMEG00000007677pabpc1l9964.840ENSOCUG00000003005PABPC1L9964.992Oryctolagus_cuniculus
ENSPMEG00000007677pabpc1l10086.378ENSORLG00000010322pabpc1l10089.720Oryzias_latipes
ENSPMEG00000007677pabpc1l10086.378ENSORLG00020021193pabpc1l10089.720Oryzias_latipes_hni
ENSPMEG00000007677pabpc1l10086.218ENSORLG00015017018pabpc1l10089.720Oryzias_latipes_hsok
ENSPMEG00000007677pabpc1l10086.343ENSOMEG00000010789pabpc1l10086.343Oryzias_melastigma
ENSPMEG00000007677pabpc1l9967.089ENSOGAG00000032999PABPC1L9967.089Otolemur_garnettii
ENSPMEG00000007677pabpc1l9968.720ENSOARG00000004578PABPC1L9968.720Ovis_aries
ENSPMEG00000007677pabpc1l9969.106ENSPPAG00000039677PABPC1L9969.481Pan_paniscus
ENSPMEG00000007677pabpc1l6267.593ENSPPRG00000019327-9867.593Panthera_pardus
ENSPMEG00000007677pabpc1l9969.144ENSPTIG00000006524PABPC1L9969.144Panthera_tigris_altaica
ENSPMEG00000007677pabpc1l6376.235ENSPTRG00000013531PABPC1L9876.235Pan_troglodytes
ENSPMEG00000007677pabpc1l9969.106ENSPANG00000018788PABPC1L9969.481Papio_anubis
ENSPMEG00000007677pabpc1l5583.969ENSPKIG00000016810-9383.969Paramormyrops_kingsleyae
ENSPMEG00000007677pabpc1l10078.309ENSPKIG00000007322pabpc1l10078.309Paramormyrops_kingsleyae
ENSPMEG00000007677pabpc1l6781.535ENSPSIG00000013289PABPC1L9981.535Pelodiscus_sinensis
ENSPMEG00000007677pabpc1l7084.103ENSPMGG00000023121-9184.103Periophthalmus_magnuspinnatus
ENSPMEG00000007677pabpc1l6096.212ENSPMGG00000023117pabpc1l9794.419Periophthalmus_magnuspinnatus
ENSPMEG00000007677pabpc1l9960.454ENSPEMG00000020671Pabpc1l9960.095Peromyscus_maniculatus_bairdii
ENSPMEG00000007677pabpc1l10098.869ENSPFOG00000013241pabpc1l10098.869Poecilia_formosa
ENSPMEG00000007677pabpc1l53100.000ENSPLAG00000023686-92100.000Poecilia_latipinna
ENSPMEG00000007677pabpc1l10098.618ENSPLAG00000017490-10098.618Poecilia_latipinna
ENSPMEG00000007677pabpc1l6799.027ENSPREG00000015886pabpc1l9999.027Poecilia_reticulata
ENSPMEG00000007677pabpc1l9968.160ENSPPYG00000011042PABPC1L9968.530Pongo_abelii
ENSPMEG00000007677pabpc1l6185.938ENSPCAG00000011787-7585.938Procavia_capensis
ENSPMEG00000007677pabpc1l9969.106ENSPCOG00000020630PABPC1L9969.643Propithecus_coquereli
ENSPMEG00000007677pabpc1l9968.558ENSPVAG00000012663PABPC1L9968.558Pteropus_vampyrus
ENSPMEG00000007677pabpc1l9294.217ENSPNYG00000004101pabpc1l10094.217Pundamilia_nyererei
ENSPMEG00000007677pabpc1l10073.844ENSPNAG00000021248pabpc1l10073.844Pygocentrus_nattereri
ENSPMEG00000007677pabpc1l9960.413ENSRNOG00000012750Pabpc1l9961.014Rattus_norvegicus
ENSPMEG00000007677pabpc1l9968.943ENSRBIG00000035381PABPC1L9969.318Rhinopithecus_bieti
ENSPMEG00000007677pabpc1l9968.000ENSRROG00000044498PABPC1L9968.371Rhinopithecus_roxellana
ENSPMEG00000007677pabpc1l9968.831ENSSBOG00000009532-9968.831Saimiri_boliviensis_boliviensis
ENSPMEG00000007677pabpc1l9864.588ENSSHAG00000011446PABPC1L10064.588Sarcophilus_harrisii
ENSPMEG00000007677pabpc1l10079.618ENSSFOG00015017304pabpc1l10079.618Scleropages_formosus
ENSPMEG00000007677pabpc1l10086.859ENSSMAG00000010516pabpc1l9898.450Scophthalmus_maximus
ENSPMEG00000007677pabpc1l10088.019ENSSDUG00000014743pabpc1l10088.019Seriola_dumerili
ENSPMEG00000007677pabpc1l9785.265ENSSLDG00000006981pabpc1l9893.151Seriola_lalandi_dorsalis
ENSPMEG00000007677pabpc1l9972.240ENSSPUG00000004233PABPC1L9972.240Sphenodon_punctatus
ENSPMEG00000007677pabpc1l10077.147ENSSPAG00000017137pabpc1l10077.634Stegastes_partitus
ENSPMEG00000007677pabpc1l9968.618ENSSSCG00000007382PABPC1L9968.618Sus_scrofa
ENSPMEG00000007677pabpc1l9971.406ENSTGUG00000005114PABPC1L10071.406Taeniopygia_guttata
ENSPMEG00000007677pabpc1l9785.809ENSTRUG00000011085pabpc1l9785.809Takifugu_rubripes
ENSPMEG00000007677pabpc1l9984.058ENSTNIG00000017903pabpc1l9884.058Tetraodon_nigroviridis
ENSPMEG00000007677pabpc1l9477.055ENSTBEG00000002851PABPC1L7977.055Tupaia_belangeri
ENSPMEG00000007677pabpc1l9466.438ENSTTRG00000007618PABPC1L10066.667Tursiops_truncatus
ENSPMEG00000007677pabpc1l9966.506ENSUAMG00000017682PABPC1L9966.506Ursus_americanus
ENSPMEG00000007677pabpc1l6673.538ENSUMAG00000025436PABPC1L9273.538Ursus_maritimus
ENSPMEG00000007677pabpc1l9780.465ENSVVUG00000018939PABPC1L9680.465Vulpes_vulpes
ENSPMEG00000007677pabpc1l9970.206ENSXETG00000022831pabpc1l9970.206Xenopus_tropicalis
ENSPMEG00000007677pabpc1l10096.607ENSXCOG00000005459pabpc1l10096.607Xiphophorus_couchianus
ENSPMEG00000007677pabpc1l10097.577ENSXMAG00000017135pabpc1l10097.577Xiphophorus_maculatus

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