EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000007711 (Gene tree)
Gene ID: 106928872
Gene Symbol: parn
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 12808 bases
Position: chrKQ552050.1:149043-161850
Accession: 106928872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000006252	RNA_bind	PF08675.11	1.7e-33	1	1
ENSPMEP00000006252	CAF1	PF04857.20	5.1e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000006146	-	4991	XM_015005429	ENSPMEP00000006252	683 (aa)	XP_014860915	UPI00072D95BF

Gene Model

Click here to download ENSPMEG00000007711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000007711's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000007711	parn	84	73.232	ENSG00000140694	PARN	91	79.661	Homo_sapiens
ENSPMEG00000007711	parn	78	77.467	ENSAMEG00000011208	PARN	83	77.467	Ailuropoda_melanoleuca
ENSPMEG00000007711	parn	87	79.095	ENSACIG00000000619	parn	100	79.095	Amphilophus_citrinellus
ENSPMEG00000007711	parn	100	83.454	ENSAOCG00000003465	parn	100	83.454	Amphiprion_ocellaris
ENSPMEG00000007711	parn	73	87.976	ENSAPEG00000010661	parn	95	87.976	Amphiprion_percula
ENSPMEG00000007711	parn	100	83.965	ENSATEG00000004661	parn	100	84.548	Anabas_testudineus
ENSPMEG00000007711	parn	82	72.712	ENSAPLG00000013914	PARN	89	73.171	Anas_platyrhynchos
ENSPMEG00000007711	parn	84	73.534	ENSACAG00000004973	PARN	89	74.276	Anolis_carolinensis
ENSPMEG00000007711	parn	84	72.896	ENSANAG00000031516	PARN	91	79.661	Aotus_nancymaae
ENSPMEG00000007711	parn	100	84.818	ENSACLG00000004742	parn	100	85.255	Astatotilapia_calliptera
ENSPMEG00000007711	parn	100	70.058	ENSAMXG00000012390	parn	96	73.957	Astyanax_mexicanus
ENSPMEG00000007711	parn	84	70.270	ENSBTAG00000018097	PARN	89	73.129	Bos_taurus
ENSPMEG00000007711	parn	84	73.064	ENSCJAG00000015866	PARN	91	79.661	Callithrix_jacchus
ENSPMEG00000007711	parn	84	71.380	ENSCAFG00000018795	PARN	83	77.052	Canis_familiaris
ENSPMEG00000007711	parn	84	71.549	ENSCAFG00020024126	PARN	83	77.239	Canis_lupus_dingo
ENSPMEG00000007711	parn	84	72.973	ENSCHIG00000018143	PARN	90	73.711	Capra_hircus
ENSPMEG00000007711	parn	69	51.351	ENSCAPG00000007984	PARN	78	51.351	Cavia_aperea
ENSPMEG00000007711	parn	84	72.420	ENSCPOG00000002263	PARN	91	72.556	Cavia_porcellus
ENSPMEG00000007711	parn	84	73.064	ENSCCAG00000030367	PARN	91	79.661	Cebus_capucinus
ENSPMEG00000007711	parn	78	77.612	ENSCATG00000041368	PARN	95	77.612	Cercocebus_atys
ENSPMEG00000007711	parn	84	73.311	ENSCLAG00000015406	PARN	90	74.138	Chinchilla_lanigera
ENSPMEG00000007711	parn	84	73.064	ENSCSAG00000008142	PARN	83	77.985	Chlorocebus_sabaeus
ENSPMEG00000007711	parn	82	56.995	ENSCHOG00000007014	PARN	90	57.143	Choloepus_hoffmanni
ENSPMEG00000007711	parn	74	73.282	ENSCPBG00000006609	PARN	89	73.410	Chrysemys_picta_bellii
ENSPMEG00000007711	parn	75	41.199	ENSCING00000010142	-	99	41.199	Ciona_intestinalis
ENSPMEG00000007711	parn	84	62.438	ENSCANG00000028849	-	76	79.661	Colobus_angolensis_palliatus
ENSPMEG00000007711	parn	83	73.356	ENSCGRG00001012096	Parn	84	76.679	Cricetulus_griseus_chok1gshd
ENSPMEG00000007711	parn	83	73.356	ENSCGRG00000004939	Parn	84	76.679	Cricetulus_griseus_crigri
ENSPMEG00000007711	parn	100	79.039	ENSCSEG00000002064	parn	100	79.039	Cynoglossus_semilaevis
ENSPMEG00000007711	parn	100	90.922	ENSCVAG00000014848	parn	100	90.922	Cyprinodon_variegatus
ENSPMEG00000007711	parn	100	66.378	ENSDARG00000102634	parn	100	67.593	Danio_rerio
ENSPMEG00000007711	parn	84	72.589	ENSDNOG00000000833	PARN	94	77.612	Dasypus_novemcinctus
ENSPMEG00000007711	parn	61	74.621	ENSETEG00000014828	-	69	74.621	Echinops_telfairi
ENSPMEG00000007711	parn	83	73.070	ENSEASG00005011400	PARN	90	73.150	Equus_asinus_asinus
ENSPMEG00000007711	parn	84	72.449	ENSECAG00000017792	PARN	90	72.978	Equus_caballus
ENSPMEG00000007711	parn	62	79.630	ENSEEUG00000010370	PARN	70	63.964	Erinaceus_europaeus
ENSPMEG00000007711	parn	100	73.547	ENSELUG00000013139	parn	90	73.362	Esox_lucius
ENSPMEG00000007711	parn	84	71.980	ENSFCAG00000044961	PARN	83	77.985	Felis_catus
ENSPMEG00000007711	parn	83	72.355	ENSFALG00000003911	PARN	98	64.254	Ficedula_albicollis
ENSPMEG00000007711	parn	84	72.973	ENSFDAG00000009234	PARN	90	73.793	Fukomys_damarensis
ENSPMEG00000007711	parn	87	87.059	ENSFHEG00000013738	parn	92	96.610	Fundulus_heteroclitus
ENSPMEG00000007711	parn	81	82.396	ENSGMOG00000003231	parn	99	82.396	Gadus_morhua
ENSPMEG00000007711	parn	90	68.906	ENSGALG00000003091	PARN	84	77.052	Gallus_gallus
ENSPMEG00000007711	parn	100	97.372	ENSGAFG00000011061	parn	100	97.372	Gambusia_affinis
ENSPMEG00000007711	parn	100	73.082	ENSGACG00000019501	parn	100	74.385	Gasterosteus_aculeatus
ENSPMEG00000007711	parn	84	73.232	ENSGGOG00000025224	PARN	91	79.661	Gorilla_gorilla
ENSPMEG00000007711	parn	100	85.401	ENSHBUG00000017906	parn	100	85.401	Haplochromis_burtoni
ENSPMEG00000007711	parn	84	72.973	ENSHGLG00000010886	PARN	91	73.242	Heterocephalus_glaber_female
ENSPMEG00000007711	parn	84	72.973	ENSHGLG00100014659	PARN	91	73.242	Heterocephalus_glaber_male
ENSPMEG00000007711	parn	81	80.000	ENSHCOG00000008683	parn	95	80.000	Hippocampus_comes
ENSPMEG00000007711	parn	100	59.768	ENSIPUG00000012401	parn	100	59.682	Ictalurus_punctatus
ENSPMEG00000007711	parn	84	71.980	ENSSTOG00000007519	PARN	91	72.696	Ictidomys_tridecemlineatus
ENSPMEG00000007711	parn	84	72.355	ENSJJAG00000023049	Parn	90	73.090	Jaculus_jaculus
ENSPMEG00000007711	parn	100	86.969	ENSKMAG00000009462	parn	100	86.237	Kryptolebias_marmoratus
ENSPMEG00000007711	parn	93	84.169	ENSLBEG00000009167	parn	99	84.169	Labrus_bergylta
ENSPMEG00000007711	parn	73	73.611	ENSLACG00000004207	PARN	100	72.406	Latimeria_chalumnae
ENSPMEG00000007711	parn	100	68.580	ENSLOCG00000000715	parn	100	68.436	Lepisosteus_oculatus
ENSPMEG00000007711	parn	84	73.242	ENSLAFG00000015036	PARN	90	73.822	Loxodonta_africana
ENSPMEG00000007711	parn	84	69.697	ENSMFAG00000044852	PARN	89	72.658	Macaca_fascicularis
ENSPMEG00000007711	parn	84	72.896	ENSMMUG00000018849	PARN	83	77.799	Macaca_mulatta
ENSPMEG00000007711	parn	84	73.064	ENSMNEG00000045108	PARN	83	77.985	Macaca_nemestrina
ENSPMEG00000007711	parn	84	72.896	ENSMLEG00000031743	PARN	83	77.799	Mandrillus_leucophaeus
ENSPMEG00000007711	parn	100	83.843	ENSMAMG00000006939	parn	100	83.697	Mastacembelus_armatus
ENSPMEG00000007711	parn	100	84.818	ENSMZEG00005013590	parn	100	85.255	Maylandia_zebra
ENSPMEG00000007711	parn	83	69.779	ENSMGAG00000001004	PARN	82	74.811	Meleagris_gallopavo
ENSPMEG00000007711	parn	83	67.462	ENSMAUG00000008025	Parn	90	67.698	Mesocricetus_auratus
ENSPMEG00000007711	parn	84	72.559	ENSMICG00000016053	PARN	91	77.966	Microcebus_murinus
ENSPMEG00000007711	parn	72	78.586	ENSMOCG00000022211	Parn	100	78.586	Microtus_ochrogaster
ENSPMEG00000007711	parn	81	85.533	ENSMMOG00000011333	parn	90	85.533	Mola_mola
ENSPMEG00000007711	parn	72	80.684	ENSMODG00000004915	PARN	99	80.684	Monodelphis_domestica
ENSPMEG00000007711	parn	96	84.018	ENSMALG00000019426	parn	94	88.448	Monopterus_albus
ENSPMEG00000007711	parn	83	72.461	MGP_CAROLIEiJ_G0020466	Parn	90	72.474	Mus_caroli
ENSPMEG00000007711	parn	83	72.289	ENSMUSG00000022685	Parn	100	74.390	Mus_musculus
ENSPMEG00000007711	parn	82	72.822	MGP_PahariEiJ_G0016172	Parn	90	72.822	Mus_pahari
ENSPMEG00000007711	parn	83	72.633	MGP_SPRETEiJ_G0021361	Parn	89	73.427	Mus_spretus
ENSPMEG00000007711	parn	84	72.250	ENSMPUG00000014464	PARN	90	73.150	Mustela_putorius_furo
ENSPMEG00000007711	parn	72	77.778	ENSMLUG00000005414	PARN	100	77.778	Myotis_lucifugus
ENSPMEG00000007711	parn	81	88.065	ENSNBRG00000006805	parn	93	88.065	Neolamprologus_brichardi
ENSPMEG00000007711	parn	84	73.232	ENSNLEG00000010241	PARN	91	79.661	Nomascus_leucogenys
ENSPMEG00000007711	parn	69	65.000	ENSMEUG00000008178	-	74	65.000	Notamacropus_eugenii
ENSPMEG00000007711	parn	82	68.221	ENSOPRG00000012187	PARN	90	68.467	Ochotona_princeps
ENSPMEG00000007711	parn	84	68.631	ENSODEG00000001617	PARN	90	68.893	Octodon_degus
ENSPMEG00000007711	parn	100	85.401	ENSONIG00000000151	parn	100	85.401	Oreochromis_niloticus
ENSPMEG00000007711	parn	83	72.650	ENSOCUG00000000322	PARN	90	73.217	Oryctolagus_cuniculus
ENSPMEG00000007711	parn	100	82.018	ENSORLG00020010313	parn	100	82.164	Oryzias_latipes_hni
ENSPMEG00000007711	parn	100	81.871	ENSORLG00015000300	parn	100	82.310	Oryzias_latipes_hsok
ENSPMEG00000007711	parn	100	81.022	ENSOMEG00000019555	parn	100	81.460	Oryzias_melastigma
ENSPMEG00000007711	parn	72	77.823	ENSOGAG00000014626	PARN	100	77.823	Otolemur_garnettii
ENSPMEG00000007711	parn	72	79.798	ENSOARG00000007574	PARN	100	79.798	Ovis_aries
ENSPMEG00000007711	parn	84	73.064	ENSPPAG00000031438	PARN	91	79.661	Pan_paniscus
ENSPMEG00000007711	parn	84	71.980	ENSPPRG00000018583	PARN	90	73.038	Panthera_pardus
ENSPMEG00000007711	parn	84	71.980	ENSPTIG00000012135	PARN	83	77.985	Panthera_tigris_altaica
ENSPMEG00000007711	parn	84	73.064	ENSPTRG00000007792	PARN	91	79.661	Pan_troglodytes
ENSPMEG00000007711	parn	84	70.539	ENSPANG00000020099	PARN	83	75.000	Papio_anubis
ENSPMEG00000007711	parn	99	67.710	ENSPKIG00000022807	parn	96	66.809	Paramormyrops_kingsleyae
ENSPMEG00000007711	parn	83	73.514	ENSPSIG00000014804	PARN	90	73.801	Pelodiscus_sinensis
ENSPMEG00000007711	parn	90	75.935	ENSPMGG00000014431	parn	85	76.260	Periophthalmus_magnuspinnatus
ENSPMEG00000007711	parn	83	71.231	ENSPEMG00000018439	Parn	90	71.503	Peromyscus_maniculatus_bairdii
ENSPMEG00000007711	parn	76	68.979	ENSPMAG00000003956	parn	98	68.979	Petromyzon_marinus
ENSPMEG00000007711	parn	62	72.170	ENSPCIG00000001259	PARN	91	79.661	Phascolarctos_cinereus
ENSPMEG00000007711	parn	100	99.414	ENSPFOG00000012823	parn	100	99.414	Poecilia_formosa
ENSPMEG00000007711	parn	100	99.122	ENSPLAG00000006395	parn	100	99.122	Poecilia_latipinna
ENSPMEG00000007711	parn	100	98.829	ENSPREG00000000147	parn	100	98.829	Poecilia_reticulata
ENSPMEG00000007711	parn	84	72.651	ENSPPYG00000007123	PARN	83	77.509	Pongo_abelii
ENSPMEG00000007711	parn	79	62.321	ENSPCAG00000001741	PARN	82	67.197	Procavia_capensis
ENSPMEG00000007711	parn	84	69.748	ENSPCOG00000019292	PARN	91	77.966	Propithecus_coquereli
ENSPMEG00000007711	parn	83	69.402	ENSPVAG00000002547	PARN	83	74.480	Pteropus_vampyrus
ENSPMEG00000007711	parn	100	85.109	ENSPNYG00000006835	parn	100	85.109	Pundamilia_nyererei
ENSPMEG00000007711	parn	93	69.626	ENSPNAG00000018905	parn	100	69.470	Pygocentrus_nattereri
ENSPMEG00000007711	parn	100	64.062	ENSRNOG00000002912	Parn	96	77.551	Rattus_norvegicus
ENSPMEG00000007711	parn	84	71.212	ENSSBOG00000034726	PARN	83	75.933	Saimiri_boliviensis_boliviensis
ENSPMEG00000007711	parn	61	79.187	ENSSHAG00000008493	PARN	93	79.187	Sarcophilus_harrisii
ENSPMEG00000007711	parn	100	68.759	ENSSFOG00015014165	parn	98	72.333	Scleropages_formosus
ENSPMEG00000007711	parn	100	80.687	ENSSMAG00000000685	parn	100	80.687	Scophthalmus_maximus
ENSPMEG00000007711	parn	100	84.884	ENSSDUG00000014555	parn	100	85.320	Seriola_dumerili
ENSPMEG00000007711	parn	64	79.540	ENSSARG00000014339	PARN	75	79.540	Sorex_araneus
ENSPMEG00000007711	parn	84	72.758	ENSSPUG00000007719	PARN	90	73.276	Sphenodon_punctatus
ENSPMEG00000007711	parn	100	85.401	ENSSPAG00000007095	parn	100	85.401	Stegastes_partitus
ENSPMEG00000007711	parn	84	72.373	ENSSSCG00000007878	PARN	80	73.276	Sus_scrofa
ENSPMEG00000007711	parn	85	70.813	ENSTGUG00000004971	PARN	82	77.358	Taeniopygia_guttata
ENSPMEG00000007711	parn	83	85.088	ENSTNIG00000008252	parn	100	74.273	Tetraodon_nigroviridis
ENSPMEG00000007711	parn	75	61.423	ENSTBEG00000010407	PARN	89	61.877	Tupaia_belangeri
ENSPMEG00000007711	parn	71	78.850	ENSTTRG00000002843	PARN	77	78.850	Tursiops_truncatus
ENSPMEG00000007711	parn	64	69.565	ENSUAMG00000008283	PARN	94	65.904	Ursus_americanus
ENSPMEG00000007711	parn	84	71.980	ENSUMAG00000004527	PARN	83	77.985	Ursus_maritimus
ENSPMEG00000007711	parn	82	70.466	ENSVPAG00000008968	PARN	93	70.537	Vicugna_pacos
ENSPMEG00000007711	parn	84	71.717	ENSVVUG00000019509	PARN	83	77.425	Vulpes_vulpes
ENSPMEG00000007711	parn	78	74.717	ENSXETG00000010994	parn	100	74.717	Xenopus_tropicalis
ENSPMEG00000007711	parn	87	91.779	ENSXCOG00000015990	parn	100	91.779	Xiphophorus_couchianus
ENSPMEG00000007711	parn	100	96.633	ENSXMAG00000014783	parn	100	96.633	Xiphophorus_maculatus