EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000008007 (Gene tree)
Gene ID: 106918325
Gene Symbol: exd3
Alias: -
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 55004 bases
Position: chrKQ551281.1:256276-311279
Accession: 106918325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000006505	DNA_pol_A_exo1	PF01612.20	2.6e-21	1	1
ENSPMEP00000006497	DNA_pol_A_exo1	PF01612.20	2.7e-21	1	1
ENSPMEP00000025194	DNA_pol_A_exo1	PF01612.20	2.7e-21	1	1
ENSPMEP00000006490	DNA_pol_A_exo1	PF01612.20	3.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000005701	-	4346	-	ENSPMEP00000025194	813 (aa)	-	-
ENSPMET00000005733	-	4000	XM_014987967	ENSPMEP00000006490	891 (aa)	XP_014843453	UPI00072E8DF5
ENSPMET00000005720	-	3853	-	ENSPMEP00000006497	813 (aa)	-	-
ENSPMET00000005711	-	4278	XM_014987970	ENSPMEP00000006505	811 (aa)	XP_014843456	UPI00072E7EB5

Gene Model

Click here to download ENSPMEG00000008007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000008007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000008007	exd3	98	39.532	ENSG00000187609	EXD3	96	39.091	Homo_sapiens
ENSPMEG00000008007	exd3	99	74.444	ENSAPOG00000015520	exd3	97	77.073	Acanthochromis_polyacanthus
ENSPMEG00000008007	exd3	99	68.565	ENSACIG00000005561	exd3	93	68.337	Amphilophus_citrinellus
ENSPMEG00000008007	exd3	99	75.476	ENSAOCG00000007721	exd3	98	75.252	Amphiprion_ocellaris
ENSPMEG00000008007	exd3	99	75.812	ENSAPEG00000007019	exd3	99	75.588	Amphiprion_percula
ENSPMEG00000008007	exd3	98	74.458	ENSATEG00000019941	exd3	98	75.143	Anabas_testudineus
ENSPMEG00000008007	exd3	91	44.295	ENSAPLG00000015358	EXD3	99	44.295	Anas_platyrhynchos
ENSPMEG00000008007	exd3	51	43.059	ENSACAG00000014448	-	93	43.059	Anolis_carolinensis
ENSPMEG00000008007	exd3	94	36.910	ENSANAG00000019674	EXD3	96	36.374	Aotus_nancymaae
ENSPMEG00000008007	exd3	100	73.043	ENSACLG00000021922	exd3	99	73.043	Astatotilapia_calliptera
ENSPMEG00000008007	exd3	99	53.631	ENSAMXG00000019494	exd3	99	53.356	Astyanax_mexicanus
ENSPMEG00000008007	exd3	96	39.005	ENSBTAG00000023788	EXD3	98	39.005	Bos_taurus
ENSPMEG00000008007	exd3	98	38.423	ENSCJAG00000013170	EXD3	96	38.279	Callithrix_jacchus
ENSPMEG00000008007	exd3	97	39.955	ENSCAFG00000019444	EXD3	98	39.663	Canis_familiaris
ENSPMEG00000008007	exd3	95	39.791	ENSCAFG00020003171	EXD3	91	39.095	Canis_lupus_dingo
ENSPMEG00000008007	exd3	98	37.845	ENSCCAG00000027996	EXD3	96	37.742	Cebus_capucinus
ENSPMEG00000008007	exd3	99	39.189	ENSCSAG00000016661	EXD3	96	39.169	Chlorocebus_sabaeus
ENSPMEG00000008007	exd3	88	44.490	ENSCPBG00000011686	EXD3	88	43.767	Chrysemys_picta_bellii
ENSPMEG00000008007	exd3	92	30.306	ENSCING00000002195	-	99	30.351	Ciona_intestinalis
ENSPMEG00000008007	exd3	98	38.269	ENSCANG00000040692	EXD3	96	38.392	Colobus_angolensis_palliatus
ENSPMEG00000008007	exd3	99	68.356	ENSCSEG00000000750	exd3	98	69.357	Cynoglossus_semilaevis
ENSPMEG00000008007	exd3	99	80.584	ENSCVAG00000011560	exd3	99	80.359	Cyprinodon_variegatus
ENSPMEG00000008007	exd3	99	55.102	ENSDARG00000063140	exd3	100	54.875	Danio_rerio
ENSPMEG00000008007	exd3	95	40.281	ENSEASG00005016023	EXD3	96	40.281	Equus_asinus_asinus
ENSPMEG00000008007	exd3	97	39.748	ENSECAG00000017546	EXD3	95	39.748	Equus_caballus
ENSPMEG00000008007	exd3	76	42.923	ENSEEUG00000000405	-	90	40.319	Erinaceus_europaeus
ENSPMEG00000008007	exd3	98	58.595	ENSELUG00000007181	exd3	99	58.586	Esox_lucius
ENSPMEG00000008007	exd3	99	36.942	ENSFCAG00000003579	EXD3	98	36.719	Felis_catus
ENSPMEG00000008007	exd3	91	43.373	ENSFALG00000005132	EXD3	97	43.373	Ficedula_albicollis
ENSPMEG00000008007	exd3	99	71.315	ENSFHEG00000011352	exd3	98	71.315	Fundulus_heteroclitus
ENSPMEG00000008007	exd3	58	43.548	ENSGMOG00000013542	-	99	43.548	Gadus_morhua
ENSPMEG00000008007	exd3	98	41.957	ENSGALG00000052646	EXD3	97	41.957	Gallus_gallus
ENSPMEG00000008007	exd3	100	90.146	ENSGAFG00000007328	exd3	100	89.922	Gambusia_affinis
ENSPMEG00000008007	exd3	91	67.114	ENSGACG00000017442	exd3	100	66.890	Gasterosteus_aculeatus
ENSPMEG00000008007	exd3	90	40.625	ENSGAGG00000011888	EXD3	92	39.973	Gopherus_agassizii
ENSPMEG00000008007	exd3	75	64.286	ENSGGOG00000024724	EXD3	95	48.361	Gorilla_gorilla
ENSPMEG00000008007	exd3	100	73.043	ENSHBUG00000001405	exd3	99	73.043	Haplochromis_burtoni
ENSPMEG00000008007	exd3	99	66.216	ENSHCOG00000020087	exd3	99	65.727	Hippocampus_comes
ENSPMEG00000008007	exd3	99	52.198	ENSIPUG00000020343	exd3	99	52.198	Ictalurus_punctatus
ENSPMEG00000008007	exd3	99	77.380	ENSKMAG00000011881	exd3	99	77.492	Kryptolebias_marmoratus
ENSPMEG00000008007	exd3	99	69.704	ENSLBEG00000004079	exd3	98	67.195	Labrus_bergylta
ENSPMEG00000008007	exd3	98	49.376	ENSLOCG00000002330	exd3	99	49.605	Lepisosteus_oculatus
ENSPMEG00000008007	exd3	92	37.533	ENSLAFG00000001122	EXD3	98	37.286	Loxodonta_africana
ENSPMEG00000008007	exd3	97	38.889	ENSMFAG00000037569	EXD3	96	38.895	Macaca_fascicularis
ENSPMEG00000008007	exd3	91	54.098	ENSMNEG00000033487	EXD3	96	38.557	Macaca_nemestrina
ENSPMEG00000008007	exd3	98	37.500	ENSMLEG00000040548	EXD3	95	37.783	Mandrillus_leucophaeus
ENSPMEG00000008007	exd3	99	70.777	ENSMAMG00000008407	exd3	99	71.375	Mastacembelus_armatus
ENSPMEG00000008007	exd3	100	73.043	ENSMZEG00005017270	exd3	99	73.043	Maylandia_zebra
ENSPMEG00000008007	exd3	88	44.134	ENSMGAG00000001267	EXD3	99	42.857	Meleagris_gallopavo
ENSPMEG00000008007	exd3	95	68.038	ENSMMOG00000021267	exd3	99	67.175	Mola_mola
ENSPMEG00000008007	exd3	58	44.936	ENSMODG00000028091	-	97	44.936	Monodelphis_domestica
ENSPMEG00000008007	exd3	100	70.197	ENSMALG00000018523	exd3	100	70.074	Monopterus_albus
ENSPMEG00000008007	exd3	96	37.927	ENSMPUG00000015130	EXD3	96	37.528	Mustela_putorius_furo
ENSPMEG00000008007	exd3	99	70.408	ENSNBRG00000019734	exd3	98	69.388	Neolamprologus_brichardi
ENSPMEG00000008007	exd3	91	39.519	ENSNLEG00000009095	-	94	39.680	Nomascus_leucogenys
ENSPMEG00000008007	exd3	91	72.087	ENSONIG00000003880	exd3	97	72.087	Oreochromis_niloticus
ENSPMEG00000008007	exd3	92	39.244	ENSOANG00000012485	-	99	39.635	Ornithorhynchus_anatinus
ENSPMEG00000008007	exd3	99	71.685	ENSORLG00000010377	exd3	99	71.685	Oryzias_latipes
ENSPMEG00000008007	exd3	99	71.573	ENSORLG00020012287	exd3	99	71.461	Oryzias_latipes_hni
ENSPMEG00000008007	exd3	99	72.153	ENSORLG00015001156	exd3	99	72.153	Oryzias_latipes_hsok
ENSPMEG00000008007	exd3	99	71.946	ENSOMEG00000023060	exd3	99	72.285	Oryzias_melastigma
ENSPMEG00000008007	exd3	98	39.435	ENSPPAG00000042435	EXD3	96	38.958	Pan_paniscus
ENSPMEG00000008007	exd3	99	37.196	ENSPPRG00000004634	EXD3	98	37.086	Panthera_pardus
ENSPMEG00000008007	exd3	98	37.422	ENSPANG00000026338	EXD3	96	37.699	Papio_anubis
ENSPMEG00000008007	exd3	99	54.020	ENSPKIG00000021103	exd3	99	53.802	Paramormyrops_kingsleyae
ENSPMEG00000008007	exd3	96	41.353	ENSPSIG00000007745	EXD3	93	40.799	Pelodiscus_sinensis
ENSPMEG00000008007	exd3	99	66.250	ENSPMGG00000023999	exd3	99	66.250	Periophthalmus_magnuspinnatus
ENSPMEG00000008007	exd3	73	37.248	ENSPMAG00000006135	-	100	37.081	Petromyzon_marinus
ENSPMEG00000008007	exd3	98	42.346	ENSPCIG00000006180	-	98	42.346	Phascolarctos_cinereus
ENSPMEG00000008007	exd3	100	99.383	ENSPFOG00000019685	exd3	100	99.383	Poecilia_formosa
ENSPMEG00000008007	exd3	100	98.644	ENSPLAG00000022290	exd3	100	98.644	Poecilia_latipinna
ENSPMEG00000008007	exd3	100	95.960	ENSPREG00000008142	exd3	100	95.960	Poecilia_reticulata
ENSPMEG00000008007	exd3	52	57.500	ENSPCAG00000005094	-	52	59.155	Procavia_capensis
ENSPMEG00000008007	exd3	100	73.043	ENSPNYG00000012849	exd3	99	73.043	Pundamilia_nyererei
ENSPMEG00000008007	exd3	98	54.846	ENSPNAG00000016753	exd3	99	54.846	Pygocentrus_nattereri
ENSPMEG00000008007	exd3	98	38.500	ENSRBIG00000031855	EXD3	96	38.375	Rhinopithecus_bieti
ENSPMEG00000008007	exd3	98	38.625	ENSRROG00000040120	EXD3	96	38.470	Rhinopithecus_roxellana
ENSPMEG00000008007	exd3	98	36.591	ENSSBOG00000022389	EXD3	91	37.302	Saimiri_boliviensis_boliviensis
ENSPMEG00000008007	exd3	91	42.133	ENSSHAG00000001276	-	97	42.267	Sarcophilus_harrisii
ENSPMEG00000008007	exd3	99	53.584	ENSSFOG00015023063	exd3	99	51.389	Scleropages_formosus
ENSPMEG00000008007	exd3	99	72.768	ENSSMAG00000019809	exd3	98	72.768	Scophthalmus_maximus
ENSPMEG00000008007	exd3	100	74.816	ENSSDUG00000006265	exd3	100	74.816	Seriola_dumerili
ENSPMEG00000008007	exd3	91	75.550	ENSSLDG00000004671	exd3	99	75.550	Seriola_lalandi_dorsalis
ENSPMEG00000008007	exd3	99	75.393	ENSSPAG00000017972	exd3	99	75.169	Stegastes_partitus
ENSPMEG00000008007	exd3	92	38.267	ENSSSCG00000005855	EXD3	97	38.204	Sus_scrofa
ENSPMEG00000008007	exd3	88	45.619	ENSTGUG00000002494	EXD3	99	45.040	Taeniopygia_guttata
ENSPMEG00000008007	exd3	99	65.309	ENSTRUG00000010236	exd3	95	63.636	Takifugu_rubripes
ENSPMEG00000008007	exd3	91	63.428	ENSTNIG00000013212	exd3	93	62.938	Tetraodon_nigroviridis
ENSPMEG00000008007	exd3	56	46.026	ENSTTRG00000003815	-	57	45.515	Tursiops_truncatus
ENSPMEG00000008007	exd3	92	39.858	ENSUAMG00000021470	EXD3	99	39.598	Ursus_americanus
ENSPMEG00000008007	exd3	95	39.792	ENSVVUG00000029403	EXD3	92	39.492	Vulpes_vulpes
ENSPMEG00000008007	exd3	100	93.742	ENSXMAG00000001467	exd3	100	93.497	Xiphophorus_maculatus