EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000008020 (Gene tree)
Gene ID: 106930151
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-13
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 6619 bases
Position: chrKQ552191.1:267-6885
Accession: 106930151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000006496	MMR_HSR1	PF01926.23	7.1e-05	1	1
ENSPMEP00000025189	MMR_HSR1	PF01926.23	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000005726	-	2562	-	ENSPMEP00000006496	200 (aa)	-	UPI000443C230
ENSPMET00000005713	-	2801	XM_015007534	ENSPMEP00000025189	200 (aa)	XP_014863020	UPI000443C230

Gene Model

Click here to download ENSPMEG00000008020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000008020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000008020	-	78	40.000	ENSPMEG00000023735	rab9a	79	40.000
ENSPMEG00000008020	-	96	35.052	ENSPMEG00000000572	rras	96	35.052
ENSPMEG00000008020	-	69	35.507	ENSPMEG00000010573	-	96	35.507
ENSPMEG00000008020	-	90	43.784	ENSPMEG00000013085	rab18a	88	43.784
ENSPMEG00000008020	-	90	34.759	ENSPMEG00000017300	rab23	96	34.673
ENSPMEG00000008020	-	92	40.513	ENSPMEG00000003177	rab33a	68	40.513
ENSPMEG00000008020	-	81	38.272	ENSPMEG00000019525	KRAS	98	36.269
ENSPMEG00000008020	-	85	54.386	ENSPMEG00000021947	rab35b	100	48.293
ENSPMEG00000008020	-	85	49.704	ENSPMEG00000009701	rab30	83	49.704
ENSPMEG00000008020	-	95	35.789	ENSPMEG00000003743	rab22a	97	35.789
ENSPMEG00000008020	-	97	53.368	ENSPMEG00000002054	rab1ba	92	53.368
ENSPMEG00000008020	-	84	40.230	ENSPMEG00000024399	rab9b	77	40.230
ENSPMEG00000008020	-	81	37.423	ENSPMEG00000012042	si:ch73-116o1.2	94	35.204
ENSPMEG00000008020	-	91	37.696	ENSPMEG00000002086	rab34a	72	37.696
ENSPMEG00000008020	-	80	43.293	ENSPMEG00000010152	zgc:101559	70	43.293
ENSPMEG00000008020	-	85	55.294	ENSPMEG00000000408	RAB15	81	55.294
ENSPMEG00000008020	-	79	44.304	ENSPMEG00000019167	rab6ba	76	44.304
ENSPMEG00000008020	-	69	35.507	ENSPMEG00000017927	RRAS2	96	35.507
ENSPMEG00000008020	-	91	47.802	ENSPMEG00000007165	si:dkey-16l2.16	87	47.802
ENSPMEG00000008020	-	87	39.583	ENSPMEG00000022709	rab33ba	79	39.583
ENSPMEG00000008020	-	80	49.686	ENSPMEG00000012389	rab11bb	78	49.686
ENSPMEG00000008020	-	88	55.429	ENSPMEG00000021986	rab15	82	55.429
ENSPMEG00000008020	-	96	52.261	ENSPMEG00000022350	zgc:171927	96	52.261
ENSPMEG00000008020	-	79	44.304	ENSPMEG00000014170	rab41	75	44.304
ENSPMEG00000008020	-	82	41.071	ENSPMEG00000010190	RAB9A	77	41.071
ENSPMEG00000008020	-	95	42.347	ENSPMEG00000008223	rab18b	93	42.347
ENSPMEG00000008020	-	81	33.140	ENSPMEG00000018145	rasl11a	67	33.140
ENSPMEG00000008020	-	73	45.695	ENSPMEG00000019646	-	63	45.695
ENSPMEG00000008020	-	84	40.230	ENSPMEG00000013734	rab9b	77	40.230
ENSPMEG00000008020	-	79	44.937	ENSPMEG00000021872	rab6bb	76	44.937
ENSPMEG00000008020	-	58	31.092	ENSPMEG00000007064	-	63	31.092
ENSPMEG00000008020	-	72	34.028	ENSPMEG00000018380	rras2	86	34.028
ENSPMEG00000008020	-	80	49.686	ENSPMEG00000007842	-	73	49.686
ENSPMEG00000008020	-	83	44.848	ENSPMEG00000006424	-	85	43.165
ENSPMEG00000008020	-	79	39.375	ENSPMEG00000013297	rab34b	63	39.375
ENSPMEG00000008020	-	95	40.104	ENSPMEG00000007238	rab5aa	89	40.104
ENSPMEG00000008020	-	80	49.057	ENSPMEG00000007917	rab11ba	55	49.057
ENSPMEG00000008020	-	91	32.432	ENSPMEG00000011210	si:cabz01085950.1	90	32.432
ENSPMEG00000008020	-	88	37.989	ENSPMEG00000004392	RAB7A	86	37.989
ENSPMEG00000008020	-	100	100.000	ENSPMEG00000022988	-	100	100.000
ENSPMEG00000008020	-	85	45.349	ENSPMEG00000004946	RAB39B	81	45.349
ENSPMEG00000008020	-	85	43.023	ENSPMEG00000019497	rab42a	79	43.023
ENSPMEG00000008020	-	78	33.544	ENSPMEG00000003690	-	75	33.544
ENSPMEG00000008020	-	96	41.146	ENSPMEG00000001400	rab25b	92	41.146
ENSPMEG00000008020	-	97	40.206	ENSPMEG00000005491	rab25a	92	40.206
ENSPMEG00000008020	-	84	52.381	ENSPMEG00000010417	rab12	70	51.163
ENSPMEG00000008020	-	81	42.236	ENSPMEG00000011336	rab5c	73	42.236
ENSPMEG00000008020	-	73	38.000	ENSPMEG00000015292	rab36	84	38.000
ENSPMEG00000008020	-	88	37.989	ENSPMEG00000021641	-	86	37.989
ENSPMEG00000008020	-	86	45.349	ENSPMEG00000012205	rab4a	81	45.349
ENSPMEG00000008020	-	86	33.714	ENSPMEG00000004703	rabl2	78	33.714
ENSPMEG00000008020	-	98	53.535	ENSPMEG00000003046	rab1ab	98	53.535
ENSPMEG00000008020	-	83	36.257	ENSPMEG00000021807	RAB29	83	36.257
ENSPMEG00000008020	-	94	41.489	ENSPMEG00000003369	rab6a	89	41.489
ENSPMEG00000008020	-	88	35.556	ENSPMEG00000020891	hrasb	94	35.754
ENSPMEG00000008020	-	79	36.420	ENSPMEG00000019159	si:dkey-13a21.4	79	36.420
ENSPMEG00000008020	-	96	33.333	ENSPMEG00000020579	rhebl1	96	33.333
ENSPMEG00000008020	-	85	44.767	ENSPMEG00000007976	-	81	44.767
ENSPMEG00000008020	-	83	42.012	ENSPMEG00000012932	si:dkey-34d22.5	76	42.012
ENSPMEG00000008020	-	77	36.364	ENSPMEG00000014302	rheb	84	36.364
ENSPMEG00000008020	-	90	31.606	ENSPMEG00000000230	rasl11b	78	31.606
ENSPMEG00000008020	-	85	30.337	ENSPMEG00000018256	dnajc27	65	30.337
ENSPMEG00000008020	-	84	46.429	ENSPMEG00000000804	rab11al	78	46.429
ENSPMEG00000008020	-	96	42.487	ENSPMEG00000002564	-	79	42.487
ENSPMEG00000008020	-	80	30.625	ENSPMEG00000001179	-	82	30.625
ENSPMEG00000008020	-	97	41.951	ENSPMEG00000007932	rab11a	95	41.951
ENSPMEG00000008020	-	96	42.487	ENSPMEG00000017161	-	79	42.487
ENSPMEG00000008020	-	58	30.769	ENSPMEG00000008907	arl3	62	30.769
ENSPMEG00000008020	-	83	44.242	ENSPMEG00000010857	rab14	77	44.242
ENSPMEG00000008020	-	86	43.275	ENSPMEG00000012614	-	77	41.954
ENSPMEG00000008020	-	90	56.425	ENSPMEG00000005288	-	88	56.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000008020	-	100	93.500	ENSAPOG00000001040	-	100	93.500	Acanthochromis_polyacanthus
ENSPMEG00000008020	-	100	65.174	ENSACIG00000003157	-	100	65.174	Amphilophus_citrinellus
ENSPMEG00000008020	-	100	93.500	ENSAOCG00000015908	-	100	93.500	Amphiprion_ocellaris
ENSPMEG00000008020	-	100	93.500	ENSAPEG00000004121	-	100	93.500	Amphiprion_percula
ENSPMEG00000008020	-	100	90.500	ENSATEG00000023662	-	100	90.500	Anabas_testudineus
ENSPMEG00000008020	-	100	92.500	ENSACLG00000019643	-	100	92.500	Astatotilapia_calliptera
ENSPMEG00000008020	-	100	96.500	ENSCVAG00000022649	-	100	96.500	Cyprinodon_variegatus
ENSPMEG00000008020	-	86	73.256	ENSDARG00000103934	megf8	99	73.256	Danio_rerio
ENSPMEG00000008020	-	100	97.500	ENSGAFG00000014787	-	100	97.500	Gambusia_affinis
ENSPMEG00000008020	-	100	92.500	ENSHBUG00000003728	-	100	92.500	Haplochromis_burtoni
ENSPMEG00000008020	-	100	92.500	ENSMZEG00005015817	-	100	92.500	Maylandia_zebra
ENSPMEG00000008020	-	100	92.500	ENSMMOG00000003924	-	100	92.500	Mola_mola
ENSPMEG00000008020	-	100	93.500	ENSMALG00000020807	-	100	93.500	Monopterus_albus
ENSPMEG00000008020	-	54	90.741	ENSOPRG00000014416	-	100	90.741	Ochotona_princeps
ENSPMEG00000008020	-	100	88.000	ENSORLG00000025395	-	100	88.000	Oryzias_latipes
ENSPMEG00000008020	-	100	88.000	ENSORLG00020009535	-	100	88.000	Oryzias_latipes_hni
ENSPMEG00000008020	-	100	88.500	ENSORLG00015015518	-	100	88.500	Oryzias_latipes_hsok
ENSPMEG00000008020	-	100	86.567	ENSPKIG00000014528	-	100	86.567	Paramormyrops_kingsleyae
ENSPMEG00000008020	-	100	100.000	ENSPFOG00000014418	-	100	100.000	Poecilia_formosa
ENSPMEG00000008020	-	100	100.000	ENSPLAG00000003181	-	100	100.000	Poecilia_latipinna
ENSPMEG00000008020	-	100	92.000	ENSPNYG00000004681	-	100	92.000	Pundamilia_nyererei
ENSPMEG00000008020	-	100	87.500	ENSSFOG00015021754	rab13	100	87.500	Scleropages_formosus
ENSPMEG00000008020	-	100	65.700	ENSSMAG00000002569	-	100	65.700	Scophthalmus_maximus
ENSPMEG00000008020	-	100	92.000	ENSSMAG00000016376	-	100	92.000	Scophthalmus_maximus
ENSPMEG00000008020	-	100	94.000	ENSSDUG00000006307	-	100	94.000	Seriola_dumerili
ENSPMEG00000008020	-	100	94.000	ENSSLDG00000015823	-	100	94.000	Seriola_lalandi_dorsalis
ENSPMEG00000008020	-	100	94.000	ENSSPAG00000022440	-	100	94.000	Stegastes_partitus
ENSPMEG00000008020	-	100	91.000	ENSTNIG00000018319	-	100	91.000	Tetraodon_nigroviridis
ENSPMEG00000008020	-	100	98.000	ENSXMAG00000016094	-	100	98.000	Xiphophorus_maculatus