EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000008299 (Gene tree)
Gene ID: 106912168
Gene Symbol: rad54l
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 13899 bases
Position: chrKQ555429.1:3991-17889
Accession: 106912168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000006747	ResIII	PF04851.15	8.5e-08	1	1
ENSPMEP00000025375	ResIII	PF04851.15	9.3e-08	1	1
ENSPMEP00000006747	DEAD	PF00270.29	9.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000005284	-	2347	XM_014979004	ENSPMEP00000006747	673 (aa)	XP_014834490	UPI00072DE315
ENSPMET00000005269	-	2431	-	ENSPMEP00000025375	701 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000008299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000008299's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000008299	rad54l	89	44.992	ENSPMEG00000016873	rad54b	72	45.066
ENSPMEG00000008299	rad54l	74	30.943	ENSPMEG00000003024	hells	73	30.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000008299	rad54l	100	79.499	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSPMEG00000008299	rad54l	99	84.398	ENSAPOG00000011643	rad54l	91	84.421	Acanthochromis_polyacanthus
ENSPMEG00000008299	rad54l	99	78.730	ENSAMEG00000013902	RAD54L	91	78.761	Ailuropoda_melanoleuca
ENSPMEG00000008299	rad54l	99	84.398	ENSACIG00000001939	rad54l	91	84.421	Amphilophus_citrinellus
ENSPMEG00000008299	rad54l	100	87.982	ENSAOCG00000017576	rad54l	91	87.982	Amphiprion_ocellaris
ENSPMEG00000008299	rad54l	96	89.130	ENSAPEG00000020658	rad54l	89	89.130	Amphiprion_percula
ENSPMEG00000008299	rad54l	95	90.723	ENSATEG00000006767	rad54l	91	90.723	Anabas_testudineus
ENSPMEG00000008299	rad54l	94	82.808	ENSAPLG00000006389	RAD54L	90	82.808	Anas_platyrhynchos
ENSPMEG00000008299	rad54l	100	81.416	ENSACAG00000002312	RAD54L	91	81.416	Anolis_carolinensis
ENSPMEG00000008299	rad54l	100	79.056	ENSANAG00000035439	RAD54L	91	79.056	Aotus_nancymaae
ENSPMEG00000008299	rad54l	100	85.163	ENSACLG00000018711	rad54l	91	85.163	Astatotilapia_calliptera
ENSPMEG00000008299	rad54l	100	84.024	ENSAMXG00000012777	rad54l	91	84.024	Astyanax_mexicanus
ENSPMEG00000008299	rad54l	100	79.676	ENSBTAG00000019901	RAD54L	91	79.676	Bos_taurus
ENSPMEG00000008299	rad54l	91	60.650	WBGene00004298	rad-54	75	60.650	Caenorhabditis_elegans
ENSPMEG00000008299	rad54l	100	79.173	ENSCJAG00000021080	RAD54L	85	80.357	Callithrix_jacchus
ENSPMEG00000008299	rad54l	100	78.909	ENSCAFG00000004272	RAD54L	91	78.909	Canis_familiaris
ENSPMEG00000008299	rad54l	99	78.877	ENSCAFG00020015066	RAD54L	91	78.909	Canis_lupus_dingo
ENSPMEG00000008299	rad54l	99	79.646	ENSCHIG00000020118	RAD54L	91	79.676	Capra_hircus
ENSPMEG00000008299	rad54l	100	78.792	ENSTSYG00000002032	RAD54L	91	78.792	Carlito_syrichta
ENSPMEG00000008299	rad54l	100	79.499	ENSCPOG00000006768	RAD54L	91	79.499	Cavia_porcellus
ENSPMEG00000008299	rad54l	100	79.499	ENSCCAG00000025783	RAD54L	91	79.499	Cebus_capucinus
ENSPMEG00000008299	rad54l	100	79.204	ENSCATG00000030589	RAD54L	91	79.204	Cercocebus_atys
ENSPMEG00000008299	rad54l	100	79.499	ENSCLAG00000004645	RAD54L	91	79.499	Chinchilla_lanigera
ENSPMEG00000008299	rad54l	100	79.204	ENSCSAG00000001229	RAD54L	91	79.204	Chlorocebus_sabaeus
ENSPMEG00000008299	rad54l	100	80.383	ENSCPBG00000005675	RAD54L	91	80.383	Chrysemys_picta_bellii
ENSPMEG00000008299	rad54l	99	63.960	ENSCING00000024456	-	91	63.960	Ciona_intestinalis
ENSPMEG00000008299	rad54l	99	64.368	ENSCSAVG00000010859	-	91	64.368	Ciona_savignyi
ENSPMEG00000008299	rad54l	100	79.056	ENSCANG00000034891	RAD54L	91	79.056	Colobus_angolensis_palliatus
ENSPMEG00000008299	rad54l	100	78.222	ENSCGRG00001014807	Rad54l	91	78.222	Cricetulus_griseus_chok1gshd
ENSPMEG00000008299	rad54l	100	78.222	ENSCGRG00000016038	Rad54l	91	78.222	Cricetulus_griseus_crigri
ENSPMEG00000008299	rad54l	99	85.268	ENSCSEG00000001983	rad54l	91	85.268	Cynoglossus_semilaevis
ENSPMEG00000008299	rad54l	85	94.475	ENSCVAG00000019561	rad54l	88	94.475	Cyprinodon_variegatus
ENSPMEG00000008299	rad54l	100	82.615	ENSDARG00000018623	rad54l	91	82.615	Danio_rerio
ENSPMEG00000008299	rad54l	100	78.761	ENSDNOG00000003395	RAD54L	91	78.761	Dasypus_novemcinctus
ENSPMEG00000008299	rad54l	100	71.802	ENSDORG00000002632	Rad54l	91	71.948	Dipodomys_ordii
ENSPMEG00000008299	rad54l	100	53.690	FBgn0002989	okr	87	53.690	Drosophila_melanogaster
ENSPMEG00000008299	rad54l	75	78.182	ENSETEG00000000550	RAD54L	69	78.182	Echinops_telfairi
ENSPMEG00000008299	rad54l	100	79.228	ENSEASG00005004511	RAD54L	91	79.351	Equus_asinus_asinus
ENSPMEG00000008299	rad54l	100	79.646	ENSECAG00000008760	RAD54L	90	81.818	Equus_caballus
ENSPMEG00000008299	rad54l	100	77.434	ENSEEUG00000008113	RAD54L	91	77.434	Erinaceus_europaeus
ENSPMEG00000008299	rad54l	100	84.831	ENSELUG00000002295	rad54l	91	84.831	Esox_lucius
ENSPMEG00000008299	rad54l	100	78.614	ENSFCAG00000003444	RAD54L	91	78.614	Felis_catus
ENSPMEG00000008299	rad54l	99	80.088	ENSFALG00000009480	RAD54L	91	80.088	Ficedula_albicollis
ENSPMEG00000008299	rad54l	100	78.909	ENSFDAG00000007806	RAD54L	91	78.909	Fukomys_damarensis
ENSPMEG00000008299	rad54l	71	87.526	ENSFHEG00000009824	rad54l	82	87.526	Fundulus_heteroclitus
ENSPMEG00000008299	rad54l	99	82.764	ENSGMOG00000014568	rad54l	91	82.764	Gadus_morhua
ENSPMEG00000008299	rad54l	100	80.917	ENSGALG00000010356	RAD54L	84	80.917	Gallus_gallus
ENSPMEG00000008299	rad54l	100	98.068	ENSGAFG00000011110	rad54l	100	98.068	Gambusia_affinis
ENSPMEG00000008299	rad54l	100	87.407	ENSGACG00000003111	rad54l	89	87.407	Gasterosteus_aculeatus
ENSPMEG00000008299	rad54l	99	79.468	ENSGAGG00000014089	RAD54L	88	79.499	Gopherus_agassizii
ENSPMEG00000008299	rad54l	100	79.056	ENSGGOG00000010602	RAD54L	91	79.056	Gorilla_gorilla
ENSPMEG00000008299	rad54l	100	85.312	ENSHBUG00000007793	rad54l	91	85.312	Haplochromis_burtoni
ENSPMEG00000008299	rad54l	100	79.646	ENSHGLG00000000753	RAD54L	91	79.646	Heterocephalus_glaber_female
ENSPMEG00000008299	rad54l	100	79.204	ENSHGLG00100016987	RAD54L	91	79.204	Heterocephalus_glaber_male
ENSPMEG00000008299	rad54l	100	82.327	ENSIPUG00000015999	rad54l	91	85.578	Ictalurus_punctatus
ENSPMEG00000008299	rad54l	100	78.466	ENSSTOG00000029125	RAD54L	91	78.466	Ictidomys_tridecemlineatus
ENSPMEG00000008299	rad54l	99	65.140	ENSJJAG00000000235	-	89	65.140	Jaculus_jaculus
ENSPMEG00000008299	rad54l	100	86.627	ENSKMAG00000009944	rad54l	91	86.627	Kryptolebias_marmoratus
ENSPMEG00000008299	rad54l	100	86.795	ENSLBEG00000014617	rad54l	88	90.148	Labrus_bergylta
ENSPMEG00000008299	rad54l	99	84.524	ENSLOCG00000004144	rad54l	100	84.524	Lepisosteus_oculatus
ENSPMEG00000008299	rad54l	99	79.616	ENSLAFG00000007583	RAD54L	91	79.646	Loxodonta_africana
ENSPMEG00000008299	rad54l	100	79.204	ENSMFAG00000031241	RAD54L	91	79.204	Macaca_fascicularis
ENSPMEG00000008299	rad54l	100	79.204	ENSMMUG00000011568	RAD54L	91	79.204	Macaca_mulatta
ENSPMEG00000008299	rad54l	100	79.056	ENSMNEG00000038562	RAD54L	91	79.056	Macaca_nemestrina
ENSPMEG00000008299	rad54l	100	79.204	ENSMLEG00000038145	RAD54L	91	79.204	Mandrillus_leucophaeus
ENSPMEG00000008299	rad54l	100	85.481	ENSMAMG00000022180	rad54l	90	87.948	Mastacembelus_armatus
ENSPMEG00000008299	rad54l	100	85.163	ENSMZEG00005018081	rad54l	91	85.163	Maylandia_zebra
ENSPMEG00000008299	rad54l	99	80.889	ENSMGAG00000010634	RAD54L	91	80.917	Meleagris_gallopavo
ENSPMEG00000008299	rad54l	100	78.815	ENSMAUG00000020076	Rad54l	91	78.815	Mesocricetus_auratus
ENSPMEG00000008299	rad54l	100	79.499	ENSMICG00000003266	RAD54L	91	79.499	Microcebus_murinus
ENSPMEG00000008299	rad54l	100	78.963	ENSMOCG00000001778	Rad54l	91	78.963	Microtus_ochrogaster
ENSPMEG00000008299	rad54l	99	82.988	ENSMALG00000021148	rad54l	91	83.013	Monopterus_albus
ENSPMEG00000008299	rad54l	100	73.963	MGP_CAROLIEiJ_G0026325	Rad54l	91	74.069	Mus_caroli
ENSPMEG00000008299	rad54l	100	78.171	ENSMUSG00000028702	Rad54l	91	78.171	Mus_musculus
ENSPMEG00000008299	rad54l	100	77.991	MGP_PahariEiJ_G0028657	Rad54l	91	77.991	Mus_pahari
ENSPMEG00000008299	rad54l	100	78.319	MGP_SPRETEiJ_G0027297	Rad54l	91	78.319	Mus_spretus
ENSPMEG00000008299	rad54l	99	78.909	ENSMPUG00000012883	RAD54L	91	78.940	Mustela_putorius_furo
ENSPMEG00000008299	rad54l	99	79.764	ENSMLUG00000003763	RAD54L	91	79.794	Myotis_lucifugus
ENSPMEG00000008299	rad54l	100	78.582	ENSNGAG00000024213	Rad54l	91	78.582	Nannospalax_galili
ENSPMEG00000008299	rad54l	100	78.909	ENSNLEG00000016548	RAD54L	91	78.909	Nomascus_leucogenys
ENSPMEG00000008299	rad54l	90	78.454	ENSMEUG00000006793	RAD54L	90	78.454	Notamacropus_eugenii
ENSPMEG00000008299	rad54l	90	87.215	ENSOPRG00000016016	RAD54L	82	87.215	Ochotona_princeps
ENSPMEG00000008299	rad54l	100	79.941	ENSODEG00000008519	RAD54L	91	79.941	Octodon_degus
ENSPMEG00000008299	rad54l	100	85.460	ENSONIG00000007659	rad54l	91	85.460	Oreochromis_niloticus
ENSPMEG00000008299	rad54l	100	79.499	ENSOCUG00000005229	RAD54L	91	79.499	Oryctolagus_cuniculus
ENSPMEG00000008299	rad54l	100	83.507	ENSORLG00000002958	rad54l	91	83.507	Oryzias_latipes
ENSPMEG00000008299	rad54l	100	83.804	ENSORLG00020006554	rad54l	90	87.480	Oryzias_latipes_hni
ENSPMEG00000008299	rad54l	100	83.358	ENSORLG00015002907	rad54l	91	83.804	Oryzias_latipes_hsok
ENSPMEG00000008299	rad54l	100	83.655	ENSOMEG00000007770	rad54l	91	83.655	Oryzias_melastigma
ENSPMEG00000008299	rad54l	100	79.706	ENSOARG00000002264	RAD54L	91	79.706	Ovis_aries
ENSPMEG00000008299	rad54l	100	79.351	ENSPPAG00000031222	RAD54L	91	79.351	Pan_paniscus
ENSPMEG00000008299	rad54l	100	78.498	ENSPPRG00000010317	RAD54L	91	78.498	Panthera_pardus
ENSPMEG00000008299	rad54l	100	78.498	ENSPTIG00000012200	RAD54L	91	78.498	Panthera_tigris_altaica
ENSPMEG00000008299	rad54l	100	79.204	ENSPTRG00000000689	RAD54L	91	79.204	Pan_troglodytes
ENSPMEG00000008299	rad54l	100	79.204	ENSPANG00000016295	RAD54L	96	79.204	Papio_anubis
ENSPMEG00000008299	rad54l	100	77.893	ENSPKIG00000016172	rad54l	91	77.893	Paramormyrops_kingsleyae
ENSPMEG00000008299	rad54l	99	80.568	ENSPSIG00000003258	RAD54L	91	80.568	Pelodiscus_sinensis
ENSPMEG00000008299	rad54l	100	78.815	ENSPMGG00000016335	rad54l	91	78.815	Periophthalmus_magnuspinnatus
ENSPMEG00000008299	rad54l	100	78.815	ENSPEMG00000011422	Rad54l	91	78.815	Peromyscus_maniculatus_bairdii
ENSPMEG00000008299	rad54l	92	74.127	ENSPMAG00000007719	rad54l	84	74.286	Petromyzon_marinus
ENSPMEG00000008299	rad54l	100	79.204	ENSPCIG00000029032	RAD54L	91	79.204	Phascolarctos_cinereus
ENSPMEG00000008299	rad54l	95	99.843	ENSPFOG00000013732	rad54l	100	99.843	Poecilia_formosa
ENSPMEG00000008299	rad54l	90	96.104	ENSPLAG00000023416	rad54l	99	96.104	Poecilia_latipinna
ENSPMEG00000008299	rad54l	100	98.068	ENSPREG00000019955	rad54l	91	98.068	Poecilia_reticulata
ENSPMEG00000008299	rad54l	93	77.540	ENSPPYG00000001398	RAD54L	90	77.540	Pongo_abelii
ENSPMEG00000008299	rad54l	78	87.234	ENSPCAG00000005323	RAD54L	71	87.234	Procavia_capensis
ENSPMEG00000008299	rad54l	100	78.909	ENSPCOG00000015423	RAD54L	91	78.909	Propithecus_coquereli
ENSPMEG00000008299	rad54l	99	80.470	ENSPNYG00000002942	rad54l	90	80.499	Pundamilia_nyererei
ENSPMEG00000008299	rad54l	100	84.593	ENSPNAG00000012483	rad54l	91	84.593	Pygocentrus_nattereri
ENSPMEG00000008299	rad54l	100	77.876	ENSRNOG00000013148	Rad54l	91	77.876	Rattus_norvegicus
ENSPMEG00000008299	rad54l	100	79.204	ENSRBIG00000043495	RAD54L	91	79.204	Rhinopithecus_bieti
ENSPMEG00000008299	rad54l	100	79.204	ENSRROG00000020844	RAD54L	91	79.204	Rhinopithecus_roxellana
ENSPMEG00000008299	rad54l	80	51.641	YGL163C	RAD54	64	51.813	Saccharomyces_cerevisiae
ENSPMEG00000008299	rad54l	100	79.351	ENSSBOG00000024672	RAD54L	91	79.351	Saimiri_boliviensis_boliviensis
ENSPMEG00000008299	rad54l	100	79.118	ENSSHAG00000000110	RAD54L	91	79.118	Sarcophilus_harrisii
ENSPMEG00000008299	rad54l	100	87.685	ENSSDUG00000019147	rad54l	91	87.685	Seriola_dumerili
ENSPMEG00000008299	rad54l	100	87.389	ENSSLDG00000012330	rad54l	91	87.389	Seriola_lalandi_dorsalis
ENSPMEG00000008299	rad54l	92	77.207	ENSSARG00000006689	RAD54L	100	77.207	Sorex_araneus
ENSPMEG00000008299	rad54l	100	86.944	ENSSPAG00000011016	rad54l	91	86.944	Stegastes_partitus
ENSPMEG00000008299	rad54l	100	79.499	ENSSSCG00000003905	RAD54L	91	79.499	Sus_scrofa
ENSPMEG00000008299	rad54l	99	79.794	ENSTGUG00000008233	RAD54L	91	79.795	Taeniopygia_guttata
ENSPMEG00000008299	rad54l	99	81.129	ENSTRUG00000008410	rad54l	91	81.157	Takifugu_rubripes
ENSPMEG00000008299	rad54l	99	79.643	ENSTNIG00000004716	rad54l	91	79.852	Tetraodon_nigroviridis
ENSPMEG00000008299	rad54l	100	74.189	ENSTTRG00000006315	RAD54L	91	74.189	Tursiops_truncatus
ENSPMEG00000008299	rad54l	99	78.603	ENSUAMG00000011824	RAD54L	90	78.603	Ursus_americanus
ENSPMEG00000008299	rad54l	99	77.266	ENSUMAG00000023603	RAD54L	90	77.266	Ursus_maritimus
ENSPMEG00000008299	rad54l	100	78.909	ENSVVUG00000007201	RAD54L	91	78.909	Vulpes_vulpes
ENSPMEG00000008299	rad54l	96	75.347	ENSXETG00000004369	rad54l	91	75.347	Xenopus_tropicalis
ENSPMEG00000008299	rad54l	62	94.495	ENSXCOG00000016028	rad54l	90	94.495	Xiphophorus_couchianus