EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000008399 (Gene tree)
Gene ID: 106904344
Gene Symbol: pprc1
Alias: -
Full Name: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 28279 bases
Position: chrKQ552919.1:25301-53579
Accession: 106904344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000025427	RRM_1	PF00076.22	1.7e-07	1	1
ENSPMEP00000006853	RRM_1	PF00076.22	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000005124	-	4499	XM_014968655	ENSPMEP00000025427	1297 (aa)	XP_014824141	UPI00072DB431
ENSPMET00000005110	-	4556	-	ENSPMEP00000006853	1347 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000008399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000008399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000008399	pprc1	100	60.015	ENSAPOG00000012945	pprc1	95	58.555	Acanthochromis_polyacanthus
ENSPMEG00000008399	pprc1	61	78.125	ENSACIG00000022532	pprc1	99	78.125	Amphilophus_citrinellus
ENSPMEG00000008399	pprc1	100	60.294	ENSAOCG00000009477	pprc1	100	58.419	Amphiprion_ocellaris
ENSPMEG00000008399	pprc1	100	58.884	ENSAPEG00000015720	pprc1	100	58.449	Amphiprion_percula
ENSPMEG00000008399	pprc1	100	54.727	ENSACLG00000007927	pprc1	100	54.727	Astatotilapia_calliptera
ENSPMEG00000008399	pprc1	82	65.645	ENSCVAG00000003223	pprc1	100	67.906	Cyprinodon_variegatus
ENSPMEG00000008399	pprc1	100	69.592	ENSFHEG00000003893	pprc1	97	68.684	Fundulus_heteroclitus
ENSPMEG00000008399	pprc1	100	55.876	ENSHBUG00000001258	pprc1	100	55.959	Haplochromis_burtoni
ENSPMEG00000008399	pprc1	100	48.054	ENSHCOG00000019171	pprc1	100	48.353	Hippocampus_comes
ENSPMEG00000008399	pprc1	59	73.913	ENSIPUG00000007999	pprc1	97	39.390	Ictalurus_punctatus
ENSPMEG00000008399	pprc1	85	74.233	ENSLBEG00000015862	pprc1	100	46.464	Labrus_bergylta
ENSPMEG00000008399	pprc1	82	54.819	ENSMAMG00000002564	pprc1	94	53.405	Mastacembelus_armatus
ENSPMEG00000008399	pprc1	100	54.874	ENSMZEG00005002989	pprc1	100	54.801	Maylandia_zebra
ENSPMEG00000008399	pprc1	97	53.166	ENSORLG00000008410	pprc1	99	52.567	Oryzias_latipes
ENSPMEG00000008399	pprc1	97	53.687	ENSORLG00020002550	pprc1	99	53.009	Oryzias_latipes_hni
ENSPMEG00000008399	pprc1	100	54.390	ENSORLG00015000733	pprc1	100	53.737	Oryzias_latipes_hsok
ENSPMEG00000008399	pprc1	100	53.846	ENSOMEG00000002727	pprc1	100	53.214	Oryzias_melastigma
ENSPMEG00000008399	pprc1	100	98.155	ENSPFOG00000014566	pprc1	100	98.155	Poecilia_formosa
ENSPMEG00000008399	pprc1	100	97.156	ENSPLAG00000010056	pprc1	100	97.156	Poecilia_latipinna
ENSPMEG00000008399	pprc1	87	94.065	ENSPREG00000020657	pprc1	78	94.065	Poecilia_reticulata
ENSPMEG00000008399	pprc1	100	56.669	ENSSMAG00000003824	pprc1	100	56.429	Scophthalmus_maximus
ENSPMEG00000008399	pprc1	92	77.707	ENSTRUG00000011524	pprc1	91	58.025	Takifugu_rubripes
ENSPMEG00000008399	pprc1	100	91.174	ENSXMAG00000013470	pprc1	100	89.639	Xiphophorus_maculatus