EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000008496 (Gene tree)
Gene ID: 106911253
Gene Symbol: snrnp70
Alias: -
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 17037 bases
Position: chrKQ554850.1:5347-22383
Accession: 106911253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000025448	RRM_1	PF00076.22	1.4e-19	1	1
ENSPMEP00000006886	RRM_1	PF00076.22	1.4e-19	1	1
ENSPMEP00000006888	RRM_1	PF00076.22	1.4e-19	1	1
ENSPMEP00000025448	U1snRNP70_N	PF12220.8	5.3e-25	1	1
ENSPMEP00000006886	U1snRNP70_N	PF12220.8	5.4e-25	1	1
ENSPMEP00000006888	U1snRNP70_N	PF12220.8	5.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000005043	-	3766	-	ENSPMEP00000006888	466 (aa)	-	UPI00044420C9
ENSPMET00000005076	-	1395	-	ENSPMEP00000025448	464 (aa)	-	-
ENSPMET00000005053	-	3440	XM_014978034	ENSPMEP00000006886	466 (aa)	XP_014833520	UPI00044420C9

Gene Model

Click here to download ENSPMEG00000008496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000008496's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000008496	snrnp70	100	82.303	ENSACIG00000017909	snrnp70	100	81.663	Amphilophus_citrinellus
ENSPMEG00000008496	snrnp70	100	81.799	ENSACLG00000011144	snrnp70	100	77.311	Astatotilapia_calliptera
ENSPMEG00000008496	snrnp70	54	47.431	WBGene00004390	rnp-7	66	49.772	Caenorhabditis_elegans
ENSPMEG00000008496	snrnp70	51	78.481	ENSCATG00000016149	SNRNP70	51	92.342	Cercocebus_atys
ENSPMEG00000008496	snrnp70	100	88.273	ENSFHEG00000010298	snrnp70	100	89.339	Fundulus_heteroclitus
ENSPMEG00000008496	snrnp70	100	97.645	ENSGAFG00000003395	snrnp70	100	97.645	Gambusia_affinis
ENSPMEG00000008496	snrnp70	100	80.342	ENSHBUG00000018856	snrnp70	100	76.709	Haplochromis_burtoni
ENSPMEG00000008496	snrnp70	54	83.465	ENSLAFG00000028536	SNRNP70	96	92.342	Loxodonta_africana
ENSPMEG00000008496	snrnp70	51	78.481	ENSMFAG00000039824	SNRNP70	51	92.342	Macaca_fascicularis
ENSPMEG00000008496	snrnp70	51	78.481	ENSMNEG00000038057	SNRNP70	52	92.342	Macaca_nemestrina
ENSPMEG00000008496	snrnp70	100	77.495	ENSMAMG00000004556	snrnp70	100	82.590	Mastacembelus_armatus
ENSPMEG00000008496	snrnp70	100	79.957	ENSMZEG00005022849	snrnp70	100	78.465	Maylandia_zebra
ENSPMEG00000008496	snrnp70	70	96.296	ENSMMOG00000005467	snrnp70	72	96.373	Mola_mola
ENSPMEG00000008496	snrnp70	74	86.377	ENSMALG00000002275	snrnp70	89	84.615	Monopterus_albus
ENSPMEG00000008496	snrnp70	99	72.689	ENSONIG00000007822	snrnp70	100	72.689	Oreochromis_niloticus
ENSPMEG00000008496	snrnp70	100	77.590	ENSORLG00000017158	snrnp70	100	76.008	Oryzias_latipes
ENSPMEG00000008496	snrnp70	100	77.801	ENSORLG00015010817	snrnp70	100	76.008	Oryzias_latipes_hsok
ENSPMEG00000008496	snrnp70	100	80.983	ENSOMEG00000013002	snrnp70	100	75.322	Oryzias_melastigma
ENSPMEG00000008496	snrnp70	50	90.043	ENSOARG00000012608	SNRNP70	61	91.556	Ovis_aries
ENSPMEG00000008496	snrnp70	51	78.481	ENSPANG00000004068	SNRNP70	51	92.342	Papio_anubis
ENSPMEG00000008496	snrnp70	100	100.000	ENSPFOG00000016671	snrnp70	100	100.000	Poecilia_formosa
ENSPMEG00000008496	snrnp70	100	99.785	ENSPLAG00000005912	snrnp70	100	99.785	Poecilia_latipinna
ENSPMEG00000008496	snrnp70	100	99.571	ENSPREG00000005486	snrnp70	100	99.571	Poecilia_reticulata
ENSPMEG00000008496	snrnp70	57	73.485	ENSPCOG00000023103	SNRNP70	79	84.234	Propithecus_coquereli
ENSPMEG00000008496	snrnp70	100	80.171	ENSPNYG00000003258	snrnp70	100	76.546	Pundamilia_nyererei
ENSPMEG00000008496	snrnp70	100	71.949	ENSSMAG00000013978	snrnp70	71	95.000	Scophthalmus_maximus
ENSPMEG00000008496	snrnp70	100	73.134	ENSTRUG00000009202	snrnp70	100	73.561	Takifugu_rubripes
ENSPMEG00000008496	snrnp70	100	89.270	ENSXCOG00000008991	snrnp70	100	90.129	Xiphophorus_couchianus
ENSPMEG00000008496	snrnp70	100	98.291	ENSXMAG00000012789	snrnp70	100	98.291	Xiphophorus_maculatus