EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000008574 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 3995 bases
Position: chrKQ554841.1:19528-23522
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000007004	RVT_1	PF00078.27	3.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000004859	-	3012	-	ENSPMEP00000007004	1003 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000008574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000008574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000008574	-	67	63.912	ENSPMEG00000021059	-	91	63.912
ENSPMEG00000008574	-	99	65.230	ENSPMEG00000003431	-	99	65.326
ENSPMEG00000008574	-	83	44.343	ENSPMEG00000003129	-	92	44.343

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000008574	-	85	37.621	ENSACIG00000013116	-	90	37.621	Amphilophus_citrinellus
ENSPMEG00000008574	-	88	36.575	ENSACIG00000010787	-	92	36.575	Amphilophus_citrinellus
ENSPMEG00000008574	-	80	37.860	ENSACIG00000009025	-	97	37.860	Amphilophus_citrinellus
ENSPMEG00000008574	-	98	36.423	ENSACIG00000007038	-	93	36.961	Amphilophus_citrinellus
ENSPMEG00000008574	-	98	35.804	ENSACIG00000012161	-	93	35.804	Amphilophus_citrinellus
ENSPMEG00000008574	-	74	36.059	ENSAMXG00000042811	-	78	36.059	Astyanax_mexicanus
ENSPMEG00000008574	-	74	34.462	ENSCPBG00000003842	-	62	34.462	Chrysemys_picta_bellii
ENSPMEG00000008574	-	96	36.638	ENSCVAG00000004138	-	98	36.638	Cyprinodon_variegatus
ENSPMEG00000008574	-	66	34.890	ENSELUG00000004618	-	63	34.890	Esox_lucius
ENSPMEG00000008574	-	75	33.578	ENSELUG00000004597	-	84	33.990	Esox_lucius
ENSPMEG00000008574	-	89	37.773	ENSFHEG00000007211	-	98	36.312	Fundulus_heteroclitus
ENSPMEG00000008574	-	96	35.462	ENSFHEG00000002865	-	90	35.462	Fundulus_heteroclitus
ENSPMEG00000008574	-	99	36.719	ENSFHEG00000022106	-	99	36.735	Fundulus_heteroclitus
ENSPMEG00000008574	-	95	37.760	ENSFHEG00000002853	-	91	37.760	Fundulus_heteroclitus
ENSPMEG00000008574	-	52	36.068	ENSGMOG00000005227	-	98	36.068	Gadus_morhua
ENSPMEG00000008574	-	96	32.401	ENSHCOG00000007389	-	95	32.401	Hippocampus_comes
ENSPMEG00000008574	-	74	34.572	ENSHCOG00000000471	-	68	34.572	Hippocampus_comes
ENSPMEG00000008574	-	96	32.166	ENSHCOG00000007397	-	94	32.166	Hippocampus_comes
ENSPMEG00000008574	-	62	46.479	ENSHCOG00000007436	-	63	46.479	Hippocampus_comes
ENSPMEG00000008574	-	79	37.049	ENSLBEG00000004576	-	97	37.049	Labrus_bergylta
ENSPMEG00000008574	-	74	35.388	ENSLBEG00000003745	-	91	35.265	Labrus_bergylta
ENSPMEG00000008574	-	79	37.049	ENSLBEG00000006732	-	97	37.049	Labrus_bergylta
ENSPMEG00000008574	-	56	31.857	ENSLACG00000009240	-	100	31.857	Latimeria_chalumnae
ENSPMEG00000008574	-	70	31.711	ENSLACG00000006357	-	95	31.711	Latimeria_chalumnae
ENSPMEG00000008574	-	96	30.036	ENSLOCG00000017064	-	98	30.036	Lepisosteus_oculatus
ENSPMEG00000008574	-	84	32.581	ENSLOCG00000011928	-	83	32.581	Lepisosteus_oculatus
ENSPMEG00000008574	-	90	38.496	ENSMAMG00000019985	-	81	38.358	Mastacembelus_armatus
ENSPMEG00000008574	-	98	38.352	ENSONIG00000020875	-	91	38.352	Oreochromis_niloticus
ENSPMEG00000008574	-	95	33.083	ENSOMEG00000015368	-	99	33.177	Oryzias_melastigma
ENSPMEG00000008574	-	88	35.084	ENSPMGG00000017392	-	99	35.084	Periophthalmus_magnuspinnatus
ENSPMEG00000008574	-	80	35.993	ENSPMGG00000001593	-	89	35.993	Periophthalmus_magnuspinnatus
ENSPMEG00000008574	-	77	85.337	ENSPLAG00000023379	-	100	85.337	Poecilia_latipinna
ENSPMEG00000008574	-	98	79.460	ENSPLAG00000011810	-	98	79.460	Poecilia_latipinna
ENSPMEG00000008574	-	99	79.504	ENSPLAG00000022994	-	99	79.504	Poecilia_latipinna
ENSPMEG00000008574	-	94	66.293	ENSPLAG00000011817	-	100	66.293	Poecilia_latipinna
ENSPMEG00000008574	-	99	45.251	ENSPREG00000005456	-	92	45.251	Poecilia_reticulata
ENSPMEG00000008574	-	99	45.480	ENSPREG00000005756	-	98	45.480	Poecilia_reticulata
ENSPMEG00000008574	-	99	67.204	ENSPREG00000012484	-	94	67.204	Poecilia_reticulata
ENSPMEG00000008574	-	77	36.278	ENSPNAG00000016635	-	70	36.278	Pygocentrus_nattereri
ENSPMEG00000008574	-	74	31.479	ENSPNAG00000014625	-	69	31.479	Pygocentrus_nattereri
ENSPMEG00000008574	-	71	37.626	ENSPNAG00000021754	-	66	37.626	Pygocentrus_nattereri
ENSPMEG00000008574	-	58	36.210	ENSPNAG00000017596	-	67	36.210	Pygocentrus_nattereri
ENSPMEG00000008574	-	88	36.829	ENSPNAG00000003539	-	78	36.829	Pygocentrus_nattereri
ENSPMEG00000008574	-	74	37.424	ENSPNAG00000007038	-	70	37.262	Pygocentrus_nattereri
ENSPMEG00000008574	-	77	68.231	ENSXCOG00000008881	-	94	68.231	Xiphophorus_couchianus
ENSPMEG00000008574	-	95	33.932	ENSXCOG00000013093	-	92	33.932	Xiphophorus_couchianus
ENSPMEG00000008574	-	96	63.601	ENSXMAG00000028672	-	92	63.601	Xiphophorus_maculatus