EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000008621 (Gene tree)
Gene ID: 106914737
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC106914737
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 7199 bases
Position: chrKQ550993.1:283219-290417
Accession: 106914737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000007046	MMR_HSR1	PF01926.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000004781	-	3265	XM_014981740	ENSPMEP00000007046	951 (aa)	XP_014837226	UPI00072D9C8D

Gene Model

Click here to download ENSPMEG00000008621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000008621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000008621	-	57	37.354	ENSPMEG00000009705	-	94	38.532
ENSPMEG00000008621	-	51	36.612	ENSPMEG00000000604	-	83	36.612
ENSPMEG00000008621	-	50	32.734	ENSPMEG00000005457	-	87	33.579
ENSPMEG00000008621	-	50	30.677	ENSPMEG00000000724	-	77	30.677
ENSPMEG00000008621	-	50	32.319	ENSPMEG00000023201	-	77	33.730
ENSPMEG00000008621	-	57	36.323	ENSPMEG00000011042	-	92	35.644
ENSPMEG00000008621	-	56	32.319	ENSPMEG00000002161	-	82	34.177
ENSPMEG00000008621	-	52	35.659	ENSPMEG00000005912	-	77	37.445
ENSPMEG00000008621	-	53	35.124	ENSPMEG00000003917	-	64	38.095
ENSPMEG00000008621	-	50	39.171	ENSPMEG00000008599	-	57	40.426
ENSPMEG00000008621	-	53	36.323	ENSPMEG00000023187	-	91	34.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000008621	-	61	45.470	ENSAMXG00000040688	-	79	44.874	Astyanax_mexicanus
ENSPMEG00000008621	-	72	51.153	ENSORLG00000003769	-	99	49.206	Oryzias_latipes
ENSPMEG00000008621	-	71	50.143	ENSORLG00020009935	-	99	48.853	Oryzias_latipes_hni
ENSPMEG00000008621	-	94	62.150	ENSOMEG00000016899	-	99	47.001	Oryzias_melastigma
ENSPMEG00000008621	-	58	96.739	ENSPFOG00000013403	-	97	96.739	Poecilia_formosa
ENSPMEG00000008621	-	99	90.116	ENSPREG00000013750	-	99	90.747	Poecilia_reticulata
ENSPMEG00000008621	-	78	40.078	ENSPNAG00000000165	-	88	41.838	Pygocentrus_nattereri
ENSPMEG00000008621	-	51	93.233	ENSXMAG00000025089	-	93	93.233	Xiphophorus_maculatus