EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000008716 (Gene tree)
Gene ID: 106918302
Gene Symbol: sfswap
Alias: -
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 72774 bases
Position: chrKQ551280.1:501904-574677
Accession: 106918302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000025621	DRY_EERY	PF09750.9	3.9e-32	1	1
ENSPMEP00000007112	DRY_EERY	PF09750.9	2.6e-14	1	1
ENSPMEP00000007112	Surp	PF01805.20	9.6e-29	1	2
ENSPMEP00000007112	Surp	PF01805.20	9.6e-29	2	2
ENSPMEP00000025621	Surp	PF01805.20	1.1e-28	1	2
ENSPMEP00000025621	Surp	PF01805.20	1.1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000004649	-	4012	XM_014987923	ENSPMEP00000025621	929 (aa)	XP_014843409	UPI00072E1675
ENSPMET00000004668	-	3557	XM_014987924	ENSPMEP00000007112	887 (aa)	XP_014843410	UPI00072DADBD

Gene Model

Click here to download ENSPMEG00000008716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000008716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000008716	sfswap	89	68.022	ENSG00000061936	SFSWAP	67	80.247	Homo_sapiens
ENSPMEG00000008716	sfswap	100	95.652	ENSAPOG00000005784	sfswap	93	95.652	Acanthochromis_polyacanthus
ENSPMEG00000008716	sfswap	99	49.789	ENSAMEG00000013818	SFSWAP	82	59.327	Ailuropoda_melanoleuca
ENSPMEG00000008716	sfswap	79	81.361	ENSAOCG00000016469	sfswap	77	81.275	Amphiprion_ocellaris
ENSPMEG00000008716	sfswap	79	81.361	ENSAPEG00000004965	sfswap	77	81.275	Amphiprion_percula
ENSPMEG00000008716	sfswap	79	79.946	ENSATEG00000021053	sfswap	79	79.589	Anabas_testudineus
ENSPMEG00000008716	sfswap	88	68.633	ENSAPLG00000013808	SFSWAP	72	60.086	Anas_platyrhynchos
ENSPMEG00000008716	sfswap	98	50.266	ENSACAG00000007220	SFSWAP	72	58.974	Anolis_carolinensis
ENSPMEG00000008716	sfswap	99	51.752	ENSANAG00000001518	SFSWAP	84	58.197	Aotus_nancymaae
ENSPMEG00000008716	sfswap	79	79.892	ENSACLG00000020159	sfswap	79	80.753	Astatotilapia_calliptera
ENSPMEG00000008716	sfswap	72	65.374	ENSAMXG00000008657	sfswap	72	66.152	Astyanax_mexicanus
ENSPMEG00000008716	sfswap	82	60.311	ENSBTAG00000000439	SFSWAP	80	60.455	Bos_taurus
ENSPMEG00000008716	sfswap	99	51.852	ENSCJAG00000003613	SFSWAP	78	58.550	Callithrix_jacchus
ENSPMEG00000008716	sfswap	97	53.388	ENSCAFG00000006625	SFSWAP	83	59.664	Canis_familiaris
ENSPMEG00000008716	sfswap	91	48.288	ENSCAFG00020011254	SFSWAP	71	52.821	Canis_lupus_dingo
ENSPMEG00000008716	sfswap	82	60.113	ENSCHIG00000008838	SFSWAP	80	60.313	Capra_hircus
ENSPMEG00000008716	sfswap	88	66.848	ENSTSYG00000010303	SFSWAP	84	58.791	Carlito_syrichta
ENSPMEG00000008716	sfswap	89	67.925	ENSCCAG00000037255	SFSWAP	85	58.199	Cebus_capucinus
ENSPMEG00000008716	sfswap	92	64.090	ENSCATG00000031094	SFSWAP	84	58.767	Cercocebus_atys
ENSPMEG00000008716	sfswap	79	66.667	ENSCHOG00000003578	SFSWAP	71	72.881	Choloepus_hoffmanni
ENSPMEG00000008716	sfswap	97	54.819	ENSCPBG00000024757	SFSWAP	82	58.824	Chrysemys_picta_bellii
ENSPMEG00000008716	sfswap	92	63.840	ENSCANG00000036501	SFSWAP	84	58.630	Colobus_angolensis_palliatus
ENSPMEG00000008716	sfswap	92	63.000	ENSCGRG00001011284	Sfswap	84	59.452	Cricetulus_griseus_chok1gshd
ENSPMEG00000008716	sfswap	78	74.629	ENSCSEG00000003773	sfswap	76	74.558	Cynoglossus_semilaevis
ENSPMEG00000008716	sfswap	50	84.152	ENSCVAG00000001205	-	97	80.670	Cyprinodon_variegatus
ENSPMEG00000008716	sfswap	72	68.436	ENSDARG00000005980	sfswap	73	68.706	Danio_rerio
ENSPMEG00000008716	sfswap	53	47.547	ENSDNOG00000018742	SFSWAP	67	55.773	Dasypus_novemcinctus
ENSPMEG00000008716	sfswap	97	48.240	ENSDORG00000010352	Sfswap	72	53.085	Dipodomys_ordii
ENSPMEG00000008716	sfswap	62	100.000	ENSETEG00000016657	-	60	100.000	Echinops_telfairi
ENSPMEG00000008716	sfswap	87	35.730	ENSEBUG00000016748	SFSWAP	73	37.962	Eptatretus_burgeri
ENSPMEG00000008716	sfswap	97	52.317	ENSEASG00005016502	SFSWAP	74	58.577	Equus_asinus_asinus
ENSPMEG00000008716	sfswap	97	50.098	ENSECAG00000007657	SFSWAP	74	58.577	Equus_caballus
ENSPMEG00000008716	sfswap	88	48.919	ENSEEUG00000001713	SFSWAP	76	47.664	Erinaceus_europaeus
ENSPMEG00000008716	sfswap	72	65.940	ENSELUG00000010942	sfswap	94	63.407	Esox_lucius
ENSPMEG00000008716	sfswap	97	53.941	ENSFCAG00000010778	SFSWAP	71	60.826	Felis_catus
ENSPMEG00000008716	sfswap	69	59.312	ENSFALG00000009577	SFSWAP	71	59.859	Ficedula_albicollis
ENSPMEG00000008716	sfswap	50	82.877	ENSGMOG00000009205	sfswap	58	82.877	Gadus_morhua
ENSPMEG00000008716	sfswap	100	95.914	ENSGAFG00000006272	sfswap	100	95.699	Gambusia_affinis
ENSPMEG00000008716	sfswap	75	82.353	ENSGACG00000017647	sfswap	79	65.335	Gasterosteus_aculeatus
ENSPMEG00000008716	sfswap	97	54.819	ENSGAGG00000002611	SFSWAP	81	58.824	Gopherus_agassizii
ENSPMEG00000008716	sfswap	92	64.090	ENSGGOG00000014877	SFSWAP	84	58.493	Gorilla_gorilla
ENSPMEG00000008716	sfswap	79	79.919	ENSHBUG00000005629	sfswap	74	80.780	Haplochromis_burtoni
ENSPMEG00000008716	sfswap	77	74.150	ENSHCOG00000009475	sfswap	77	72.592	Hippocampus_comes
ENSPMEG00000008716	sfswap	71	68.921	ENSIPUG00000010598	sfswap	74	68.466	Ictalurus_punctatus
ENSPMEG00000008716	sfswap	93	62.954	ENSSTOG00000000773	SFSWAP	75	59.478	Ictidomys_tridecemlineatus
ENSPMEG00000008716	sfswap	99	52.654	ENSJJAG00000006609	Sfswap	71	60.286	Jaculus_jaculus
ENSPMEG00000008716	sfswap	78	82.118	ENSKMAG00000013168	sfswap	75	82.830	Kryptolebias_marmoratus
ENSPMEG00000008716	sfswap	77	77.762	ENSLBEG00000010239	sfswap	78	78.551	Labrus_bergylta
ENSPMEG00000008716	sfswap	71	59.629	ENSLACG00000018678	SFSWAP	71	58.537	Latimeria_chalumnae
ENSPMEG00000008716	sfswap	100	57.274	ENSLOCG00000006202	sfswap	72	64.215	Lepisosteus_oculatus
ENSPMEG00000008716	sfswap	98	53.061	ENSMFAG00000037352	SFSWAP	84	58.904	Macaca_fascicularis
ENSPMEG00000008716	sfswap	99	53.360	ENSMMUG00000020343	SFSWAP	75	58.960	Macaca_mulatta
ENSPMEG00000008716	sfswap	99	53.360	ENSMNEG00000041002	SFSWAP	84	58.960	Macaca_nemestrina
ENSPMEG00000008716	sfswap	92	61.558	ENSMLEG00000035728	SFSWAP	83	56.534	Mandrillus_leucophaeus
ENSPMEG00000008716	sfswap	100	76.874	ENSMAMG00000006631	sfswap	100	76.874	Mastacembelus_armatus
ENSPMEG00000008716	sfswap	79	79.892	ENSMZEG00005017834	SFSWAP	75	80.753	Maylandia_zebra
ENSPMEG00000008716	sfswap	88	68.817	ENSMGAG00000002191	SFSWAP	81	59.233	Meleagris_gallopavo
ENSPMEG00000008716	sfswap	90	65.396	ENSMICG00000004465	SFSWAP	99	51.429	Microcebus_murinus
ENSPMEG00000008716	sfswap	85	62.080	ENSMODG00000015581	SFSWAP	67	54.651	Monodelphis_domestica
ENSPMEG00000008716	sfswap	77	78.404	ENSMALG00000012603	sfswap	82	77.915	Monopterus_albus
ENSPMEG00000008716	sfswap	53	47.358	MGP_CAROLIEiJ_G0027780	Sfswap	94	60.526	Mus_caroli
ENSPMEG00000008716	sfswap	97	52.990	ENSMPUG00000002218	SFSWAP	74	58.971	Mustela_putorius_furo
ENSPMEG00000008716	sfswap	72	57.613	ENSMLUG00000011296	SFSWAP	77	59.444	Myotis_lucifugus
ENSPMEG00000008716	sfswap	100	52.819	ENSNGAG00000018167	Sfswap	75	57.923	Nannospalax_galili
ENSPMEG00000008716	sfswap	74	79.728	ENSNBRG00000020857	sfswap	73	79.728	Neolamprologus_brichardi
ENSPMEG00000008716	sfswap	98	51.073	ENSNLEG00000008386	SFSWAP	76	58.607	Nomascus_leucogenys
ENSPMEG00000008716	sfswap	62	63.661	ENSOPRG00000006983	-	75	63.750	Ochotona_princeps
ENSPMEG00000008716	sfswap	89	73.641	ENSONIG00000003757	sfswap	88	73.098	Oreochromis_niloticus
ENSPMEG00000008716	sfswap	92	61.881	ENSOCUG00000002165	SFSWAP	76	55.921	Oryctolagus_cuniculus
ENSPMEG00000008716	sfswap	78	78.052	ENSORLG00000010983	sfswap	77	78.326	Oryzias_latipes
ENSPMEG00000008716	sfswap	78	78.052	ENSORLG00020010779	sfswap	77	78.326	Oryzias_latipes_hni
ENSPMEG00000008716	sfswap	78	78.493	ENSORLG00015023093	sfswap	77	78.767	Oryzias_latipes_hsok
ENSPMEG00000008716	sfswap	77	78.750	ENSOMEG00000022065	sfswap	77	78.897	Oryzias_melastigma
ENSPMEG00000008716	sfswap	82	60.113	ENSOARG00000014314	SFSWAP	81	60.313	Ovis_aries
ENSPMEG00000008716	sfswap	89	68.207	ENSPPAG00000036706	SFSWAP	81	60.402	Pan_paniscus
ENSPMEG00000008716	sfswap	97	50.049	ENSPPRG00000017318	SFSWAP	83	59.610	Panthera_pardus
ENSPMEG00000008716	sfswap	89	67.308	ENSPTIG00000004304	SFSWAP	72	67.493	Panthera_tigris_altaica
ENSPMEG00000008716	sfswap	89	68.207	ENSPTRG00000005640	SFSWAP	83	59.275	Pan_troglodytes
ENSPMEG00000008716	sfswap	92	64.090	ENSPANG00000019737	SFSWAP	84	58.767	Papio_anubis
ENSPMEG00000008716	sfswap	72	65.217	ENSPKIG00000008327	sfswap	73	65.478	Paramormyrops_kingsleyae
ENSPMEG00000008716	sfswap	53	47.025	ENSPEMG00000001237	Sfswap	75	57.923	Peromyscus_maniculatus_bairdii
ENSPMEG00000008716	sfswap	85	68.882	ENSPCIG00000006062	SFSWAP	77	58.772	Phascolarctos_cinereus
ENSPMEG00000008716	sfswap	100	99.248	ENSPFOG00000019657	sfswap	100	99.248	Poecilia_formosa
ENSPMEG00000008716	sfswap	100	98.818	ENSPLAG00000008513	sfswap	100	98.818	Poecilia_latipinna
ENSPMEG00000008716	sfswap	100	97.854	ENSPREG00000006692	sfswap	100	97.854	Poecilia_reticulata
ENSPMEG00000008716	sfswap	91	64.090	ENSPPYG00000005129	SFSWAP	76	58.493	Pongo_abelii
ENSPMEG00000008716	sfswap	52	62.298	ENSPCAG00000004977	-	56	60.931	Procavia_capensis
ENSPMEG00000008716	sfswap	92	63.591	ENSPCOG00000023786	SFSWAP	87	56.636	Propithecus_coquereli
ENSPMEG00000008716	sfswap	72	65.363	ENSPNAG00000007073	sfswap	73	67.701	Pygocentrus_nattereri
ENSPMEG00000008716	sfswap	99	52.129	ENSRBIG00000036330	SFSWAP	77	57.005	Rhinopithecus_bieti
ENSPMEG00000008716	sfswap	92	64.090	ENSRROG00000032001	SFSWAP	84	58.493	Rhinopithecus_roxellana
ENSPMEG00000008716	sfswap	92	63.772	ENSSBOG00000026217	SFSWAP	89	56.812	Saimiri_boliviensis_boliviensis
ENSPMEG00000008716	sfswap	97	49.840	ENSSHAG00000014232	SFSWAP	72	59.049	Sarcophilus_harrisii
ENSPMEG00000008716	sfswap	68	67.071	ENSSFOG00015000766	sfswap	70	66.362	Scleropages_formosus
ENSPMEG00000008716	sfswap	78	78.338	ENSSMAG00000018718	sfswap	76	77.657	Scophthalmus_maximus
ENSPMEG00000008716	sfswap	75	67.188	ENSSARG00000000424	SFSWAP	84	60.976	Sorex_araneus
ENSPMEG00000008716	sfswap	87	49.089	ENSSPUG00000010272	SFSWAP	70	56.529	Sphenodon_punctatus
ENSPMEG00000008716	sfswap	77	81.259	ENSSPAG00000014310	sfswap	79	80.189	Stegastes_partitus
ENSPMEG00000008716	sfswap	99	51.709	ENSSSCG00000009744	SFSWAP	76	58.658	Sus_scrofa
ENSPMEG00000008716	sfswap	97	54.424	ENSTGUG00000004623	SFSWAP	74	60.623	Taeniopygia_guttata
ENSPMEG00000008716	sfswap	51	72.662	ENSTBEG00000004983	-	52	72.692	Tupaia_belangeri
ENSPMEG00000008716	sfswap	76	66.579	ENSTTRG00000013478	SFSWAP	73	53.964	Tursiops_truncatus
ENSPMEG00000008716	sfswap	90	66.667	ENSUAMG00000016807	SFSWAP	80	61.039	Ursus_americanus
ENSPMEG00000008716	sfswap	75	67.797	ENSUMAG00000002957	SFSWAP	75	53.706	Ursus_maritimus
ENSPMEG00000008716	sfswap	97	53.388	ENSVVUG00000010753	SFSWAP	74	59.275	Vulpes_vulpes
ENSPMEG00000008716	sfswap	97	47.276	ENSXETG00000009350	sfswap	88	58.370	Xenopus_tropicalis
ENSPMEG00000008716	sfswap	100	97.297	ENSXMAG00000009020	sfswap	100	97.297	Xiphophorus_maculatus